prot_L-elsbetiae_contig84.17403.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig84.17403.1
Unique Nameprot_L-elsbetiae_contig84.17403.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length566
Homology
BLAST of mRNA_L-elsbetiae_contig84.17403.1 vs. uniprot
Match: D8LI31_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI31_ECTSI)

HSP 1 Score: 524 bits (1350), Expect = 3.910e-177
Identity = 464/558 (83.15%), Postives = 476/558 (85.30%), Query Frame = 0
Query:    6 RRSRCWLVAFGGSLVCWAASAADPLPQQVEHPFRNLAAWLREASPDMRSADPKAISRGITVLSNSQSYVKSFDGMAYELKGKIKEGGSTADIDKLLQQAELYESESSAKKAGKLVRLLIEVERSLNSAEAAEIASQSDPARAARYMKDAGLRLLPEPXXXXXXXXXXXXXXXXXXXXXXXXXTPTDVASKVRARSRDRSSTAKTAAAKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAATL----GEPLETFVVTVAGCEVRCLLMLEERAGDGGPVDGDGEGGAEGGRLVVAVGDSLTGAALLQSLFEEPAVVQLASHGLMRETAYVNRAAFQAACDILEWAGPFIKASVEHGGPFEGYRVHCAGHSFGGAVAACLAGLLDGAIDVEASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAVVRVDGAAPWVAACRDRVTCVTLGCPPCLSQNLRLPFVTSFVLGDDMVPRTSHESLRRLKRRLLQ 559
            RR RCWLVAFGG+L CW A AADP  QQ EHPFRNLAAWLREASPDMRSA+PKAISRGITVLSNSQSYVKSFDGMAYELKGKIKE GSTADI+KL  QAELYES SS KKA KLVRLLIEVER+LNSAEAAEIASQSDP+RAA+YMKDAGLR LP+PXXXXXXXXXXXXXXXXXXXXXXXXX            +R              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         GEPLE FVV VAGCEVRC LML+ER G+      +GEG     RLVVAVGDSLTG ALL+SLFEEPAVVQLASHGLMRETAYVNR AFQ ACDILEWAGPFIKASVE GG FEGYRVHCAGHSFGGAVAACLAGLLDGAIDVE S   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    VRVDGA PWV   RD VTCVTLGCPPCLSQNLRLPFVTSFVLGDDMVPRTSHESLRRLKRRLLQ
Sbjct:    5 RRLRCWLVAFGGTLACWVALAADPSLQQAEHPFRNLAAWLREASPDMRSAEPKAISRGITVLSNSQSYVKSFDGMAYELKGKIKETGSTADIEKLTGQAELYESASSVKKANKLVRLLIEVERALNSAEAAEIASQSDPSRAAQYMKDAGLRFLPDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPTRVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEPLEAFVVNVAGCEVRCFLMLDERGGE------EGEG-----RLVVAVGDSLTGEALLESLFEEPAVVQLASHGLMRETAYVNRVAFQCACDILEWAGPFIKASVEPGGAFEGYRVHCAGHSFGGAVAACLAGLLDGAIDVEPSGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRVDGAEPWVGIRRDGVTCVTLGCPPCLSQNLRLPFVTSFVLGDDMVPRTSHESLRRLKRRLLQ 551          
BLAST of mRNA_L-elsbetiae_contig84.17403.1 vs. uniprot
Match: A0A835YUE7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE7_9STRA)

HSP 1 Score: 107 bits (267), Expect = 4.680e-21
Identity = 95/253 (37.55%), Postives = 115/253 (45.45%), Query Frame = 0
Query:  328 AEGGRLVVAVGDSLTGAALLQSLFEEPAVVQLASHGLMRETAYVNRAAFQAACDILEWAGP----FIKASVEHGGPFEGYRVHCAGHSFGGAVAACLAGLLDGAIDVEASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAVVRVDGAAP-----------------WVAACRDRVTCVTLGCPPCLSQNLRLPFVTSFVLGDDMVPRTSHESLRRLKRRLLQ 559
            A+G R+V A+ D L G ALL++L   P  + LA+ GL+ ET +   A + AA  +L    P    F+++    G       V   GHSF GAVAA  AGLLDGA+ VE     XXXXXXX                                                GG+  R  G A                  +V A R RV CVT GCPPC+S    LP VTSFVLGDDMVPR S +SL +LKRRL Q
Sbjct:  183 AQGKRVVAALADDLGGGALLRALSAAPIALPLAARGLLHETLHTAPAVWAAAHALLAAIAPAVLNFLRSPAGAGA-----TVLFVGHSFAGAVAAVAAGLLDGALAVEGGGGSXXXXXXXSGRRSEGKVGSAEARCK-------------------------------GGSSRRAKGVAEGGDGGMXXXXXXXXSGGYVGAARGRVKCVTFGCPPCVSGAAALPCVTSFVLGDDMVPRVSAQSLEQLKRRLRQ 399          
BLAST of mRNA_L-elsbetiae_contig84.17403.1 vs. uniprot
Match: A0A4D9DDN3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDN3_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.180e-10
Identity = 88/236 (37.29%), Postives = 113/236 (47.88%), Query Frame = 0
Query:  332 RLVVAVGDSLTGAALLQSLFEEPAVVQLASHGLMRETAYVNRAAFQAACDILEWAGPFIKASVEHGGPFEGYRVHCAGHSFGGAVAACLAGLLDGAIDVEASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAVVRVDGAAPWVAACR-------DRVTCVTLGCPPCLSQNLR--LPFVTSFVLGDDMVPRTSHESLRRLKRRLL 558
            RL ++VGDSLT A  L  L   P  V L   GL+R +  VN   + AA  ++E     +  + E       Y +H  G S GG+V A +AG+LDG I VE +                            XXXXXXXXXXXXXXXXXXXXX                   + W  A R       D VT       PC+S+N+R    F TSF+LGDDM+PR +  S++RL++RLL
Sbjct:  259 RLTLSVGDSLTWAQRLDVLRAPPLTVPLRPRGLLRRSMMVNPRLWAAAATVIERVRAVLTTARE---TCPNYALHVVGFSLGGSVGALVAGVLDGTIFVEGAVPAPPTRRSHTRRGRAARAGVAVPEEGEXXXXXXXXXXXXXXXXXXXXX----------------SSTSSWAHALRGATGLAHDNVTAFVFAPSPCISKNIRGLRRFTTSFILGDDMMPRATALSIKRLEKRLL 475          
BLAST of mRNA_L-elsbetiae_contig84.17403.1 vs. uniprot
Match: K8ZAB7_NANGC (Fructose-bisphosphate aldolase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZAB7_NANGC)

HSP 1 Score: 75.5 bits (184), Expect = 1.590e-10
Identity = 71/236 (30.08%), Postives = 98/236 (41.53%), Query Frame = 0
Query:  332 RLVVAVGDSLTGAALLQSLFEEPAVVQLASHGLMRETAYVNRAAFQAACDILEWAGPFIKASVEHGGPFEGYRVHCAGHSFGGAVAACLAGLLDGAIDVEASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAVVRVDGAAPWVAACR-------DRVTCVTLGCPPCLSQNLR--LPFVTSFVLGDDMVPRTSHESLRRLKRRLL 558
            RL ++VGDSLT A  L  L      V L   GL+R +  VN   + AA  ++E     +  ++    P  GY +H  G S GG+V A +AG+LDG+I VE +                                           XXXX                     + W  A R       D VT       PC+S+N+R    F TSF+LGDDM+PR +  S++RL++RLL
Sbjct:  230 RLTLSVGDSLTWAQRLDVLRAPSLTVPLRPRGLLRRSMMVNPRLWAAAVTVIERVKAVLTTALRETCP--GYALHVVGFSLGGSVGALVAGVLDGSIFVEGAVPAPPTRRSHTRRGRGARAGVAVPDEGEAEGQDGAKEASISPAXXXXP----------------TSPTSSWPQALRGATGLAHDNVTAFVFAPSPCISKNIRGLRRFTTSFILGDDMMPRATALSIKRLEKRLL 447          
BLAST of mRNA_L-elsbetiae_contig84.17403.1 vs. uniprot
Match: A0A7S4AGX7_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AGX7_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.200e-6
Identity = 84/229 (36.68%), Postives = 111/229 (48.47%), Query Frame = 0
Query:  331 GRLVVAVGD--SLTGAALLQSLFEEPAVVQLASHGLMRETAYVNRAAFQAACDILEWAGPFIKASVEHGGPFEGYRVHCAGHSFGGAVAACLAGLLDGAIDVEASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAVVRVDGAAPWVAACRDRVTCVTLGCPPCLSQNLRLPFVTSFVLGDDMVPRTSHESLRRLKRRL 557
            GRL+V +GD  SLT A  +Q L E P  ++L+S  +  E A V    ++ A  +L    P ++        +    VH  GHS  G VA+  A +LDG+I +       XXXXXXXXXXXXX                              XXXXXXXXXXX           P     R R + + +G PPCLS N+   F TSFV GDD++ RT+ +S+ RL RR+
Sbjct:  262 GRLLVVLGDHSSLTVAQKIQILDETPKKIKLSSGLVTNEVASVQPTLYKHAGKLLTLLEPQLRQ-------YNTSAVHFVGHSLAGGVASLAATMLDGSIPMPKKRPRGXXXXXXXXXXXXXPASNDENPSTDSAGESEEENPEDEVVPLEKXXXXXXXXXXXXXXXXXXXXXXPLSGLGRARASALAVGSPPCLSSNVVAAFCTSFVYGDDILCRTTKDSIDRLVRRI 483          
BLAST of mRNA_L-elsbetiae_contig84.17403.1 vs. uniprot
Match: A0A7S1UN44_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UN44_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 6.380e-6
Identity = 27/48 (56.25%), Postives = 33/48 (68.75%), Query Frame = 0
Query:  509 RDRVTCVTLGCPPCLSQNLRLPFVTSFVLGDDMVPRTSHESLRRLKRR 556
            R R + V LG PPC+S NL+  FV S V GDD+V RT+HES+ RL  R
Sbjct:   55 RGRASAVALGPPPCISSNLKAAFVKSIVYGDDVVCRTTHESIERLLSR 102          
BLAST of mRNA_L-elsbetiae_contig84.17403.1 vs. uniprot
Match: A0A7S2S0W5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0W5_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 3.610e-5
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0
Query:  509 RDRVTCVTLGCPPCLSQNLRLPFVTSFVLGDDMVPRTSHESLRRLKRRLLQA 560
            + R + V LG PPCLS N++  +VTS V GDD+V RT+ +S+ RL RR ++A
Sbjct:    7 KGRTSAVVLGPPPCLSPNVKASYVTSLVHGDDIVCRTTPQSMDRLYRRTVRA 58          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig84.17403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LI31_ECTSI3.910e-17783.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUE7_9STRA4.680e-2137.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DDN3_9STRA1.180e-1037.29Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
K8ZAB7_NANGC1.590e-1030.08Fructose-bisphosphate aldolase n=1 Tax=Nannochloro... [more]
A0A7S4AGX7_9STRA1.200e-636.68Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A7S1UN44_9STRA6.380e-656.25Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2S0W5_9STRA3.610e-550.00Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46023:SF5coord: 396..560
NoneNo IPR availablePANTHERPTHR46023FAMILY NOT NAMEDcoord: 396..560
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..565
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.794
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 369..547

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig84contigL-elsbetiae_contig84:4651..9316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig84.17403.1mRNA_L-elsbetiae_contig84.17403.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig84 4635..9316 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig84.17403.1 ID=prot_L-elsbetiae_contig84.17403.1|Name=mRNA_L-elsbetiae_contig84.17403.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=566bp
MVRHHRRSRCWLVAFGGSLVCWAASAADPLPQQVEHPFRNLAAWLREASP
DMRSADPKAISRGITVLSNSQSYVKSFDGMAYELKGKIKEGGSTADIDKL
LQQAELYESESSAKKAGKLVRLLIEVERSLNSAEAAEIASQSDPARAARY
MKDAGLRLLPEPPPPPPPPPPTEDKNATAATSAESSATPTDVASKVRARS
RDRSSTAKTAAAKTAAERRRPSSSSSSSSSSSSSAAAAAAERDSRGQKKN
TKKKSSKRRRSVAAAEEGGSSAAAAAAAAAAAAGAATLGEPLETFVVTVA
GCEVRCLLMLEERAGDGGPVDGDGEGGAEGGRLVVAVGDSLTGAALLQSL
FEEPAVVQLASHGLMRETAYVNRAAFQAACDILEWAGPFIKASVEHGGPF
EGYRVHCAGHSFGGAVAACLAGLLDGAIDVEASSAGGGDGGDGRRRGSGI
SGGGGAGSGGSSRRRLSDASSSSSSSSSSFPEESEASGSEEGGAVVRVDG
AAPWVAACRDRVTCVTLGCPPCLSQNLRLPFVTSFVLGDDMVPRTSHESL
RRLKRRLLQASCCCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase