prot_L-elsbetiae_contig839.17390.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig839.17390.1
Unique Nameprot_L-elsbetiae_contig839.17390.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length375
Homology
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BLAST of mRNA_L-elsbetiae_contig839.17390.1 vs. uniprot
Match: A0A6H5L1Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Y8_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 5.980e-69
Identity = 175/371 (47.17%), Postives = 215/371 (57.95%), Query Frame = 0 
Query:    1 RKRPQPCQTQVVVPVAFNLRLGCGDAAFVLAEMLRHILFMRGQLPMPYNQLLQARQRRTLLCIMHVLNEREYRDVIAREEKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNRGARAKSERPLAKASVHRRARKCLGALEETTLAIEEAFADAAGKGRPVLEALVLLGTSHLSPREMYSITFAEPPSPDGSLPGQDGGLQARGEGCHNSGRTGGXXXXXXSIGVQGKSSLAEAYSRKLVRSVVGEMSSVTFRGLGSCRVHLFLRVADAPLV-VAEVSALQPHTYIPIGTKAPNNDGANTARSPSXXXXXXXXPSPISLAATTALHRLVPRPGFKIRVSRSRPAPKVKNTTSK 370
            RKR  P Q +V VPV F   LG GDAA V+ E+LRH+LFMRGQLPMP+ QL++            VL+ERE RD + R      XXXXXXXXXXX                                  R R  +AKS RPLAKA  HRRARK L AL ETTLA+EEAFADAA KGRPVLEALVLLG SHLSPRE+YS+TF+      GS    D   +++     N+  +G          ++GKSSLA+AYSR LVRS+VG+MSS+  RGLGSCRVHLFLR+A+ P+  +   + +   T +   +   +   A+TA + S         S    +  + + RL PRPGFKIR+SRSRPAPKV    SK
Sbjct:   25 RKRQHPEQQEVTVPVVFKQHLGSGDAAHVVIEVLRHVLFMRGQLPMPFQQLVK------------VLDEREERDEVDRXXXXXXXXXXXXXXXXXAREGRGRTREGGDALGSGLTGAVD----------RRRSKKAKSGRPLAKAPPHRRARKGLRALAETTLAVEEAFADAARKGRPVLEALVLLGASHLSPREIYSVTFS------GSC--LDESSESKDTTTRNTASSG---------DLRGKSSLADAYSRTLVRSMVGKMSSMPLRGLGSCRVHLFLRIAEGPVQDLCTAAPVANETMVEASSTLTSKTMASTASTRSSVNSGGSN-STGPPSGNSIVQRLTPRPGFKIRISRSRPAPKVSIVLSK 355
[Close]
BLAST of mRNA_L-elsbetiae_contig839.17390.1 vs. uniprot
Match: D7FJH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJH5_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 6.410e-55
Identity = 141/289 (48.79%), Postives = 167/289 (57.79%), Query Frame = 0 
Query:    1 RKRPQPCQTQVVVPVAFNLRLGCGDAAFVLAEMLRHILFMRGQLPMPYNQLLQARQRRTLLCIMHVLNEREYRDVIAREEKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNRGARAKSERPLAKASVHRRARKCLGALEETTLAIEEAFADAAGKGRPVLEALVLLGTSHLSPREMYSITFAEPPSPDGSLPGQDGGLQARGEGCHNSGRTGGXXXXXXSIGVQGKSSLAEAYSRKLVRSVVGEMSSVTFRGLGSCRVHLFLRVADAPL 289
            RKR  P Q +V VPV F   L  GDAA V+ E+LRH+LFMRGQLPMP+ QL++            VL+ERE             XXXXXXXXX                                    R R  +AKS RPLAKA  HRRARK L AL ETTLA+EEAFADAA KGRPVLEALVLLG SHLSPR++YS+TF        SL   D   +++     N+   G          V+GKS+LA+AYSR LVRS+VG+MSS+  RGLGSCRVHLFLR+A+ P+
Sbjct:   25 RKRQHPEQLEVTVPVVFKQHLRSGDAAHVVIEVLRHVLFMRGQLPMPFQQLVK------------VLDEREEXXXXXXXXXXXXXXXXXXXXXAREGRGRTREGGDALGSGLTETVG------------RRRSKKAKSGRPLAKAPPHRRARKSLRALAETTLAVEEAFADAARKGRPVLEALVLLGASHLSPRKIYSVTFT-----GSSL---DESSESKDTATRNTASGG---------DVRGKSNLADAYSRTLVRSMVGKMSSMPLRGLGSCRVHLFLRIAEGPV 272
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig839.17390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1Y8_9PHAE5.980e-6947.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJH5_ECTSI6.410e-5548.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.900.20coord: 2..87
e-value: 9.0E-6
score: 26.8
coord: 122..212
e-value: 1.7E-5
score: 25.9
NoneNo IPR availablePANTHERPTHR15681FAMILY NOT NAMEDcoord: 134..285
coord: 14..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig839contigL-elsbetiae_contig839:6371..12638 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig839.17390.1mRNA_L-elsbetiae_contig839.17390.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig839 6371..12638 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig839.17390.1 ID=prot_L-elsbetiae_contig839.17390.1|Name=mRNA_L-elsbetiae_contig839.17390.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=375bp
RKRPQPCQTQVVVPVAFNLRLGCGDAAFVLAEMLRHILFMRGQLPMPYNQ
LLQARQRRTLLCIMHVLNEREYRDVIAREEKAAAAAAAAAAARASGDAGA
GREGRGGAGGGGGGGRGGPRGTTATTASKRNRGARAKSERPLAKASVHRR
ARKCLGALEETTLAIEEAFADAAGKGRPVLEALVLLGTSHLSPREMYSIT
FAEPPSPDGSLPGQDGGLQARGEGCHNSGRTGGGGGGGGSIGVQGKSSLA
EAYSRKLVRSVVGEMSSVTFRGLGSCRVHLFLRVADAPLVVAEVSALQPH
TYIPIGTKAPNNDGANTARSPSPTPTPSHAPSPISLAATTALHRLVPRPG
FKIRVSRSRPAPKVKNTTSKSRQQ*
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