prot_L-elsbetiae_contig8380.17383.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8380.17383.1
Unique Nameprot_L-elsbetiae_contig8380.17383.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length434
Homology
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BLAST of mRNA_L-elsbetiae_contig8380.17383.1 vs. uniprot
Match: A0A6H5J9Z0_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z0_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 1.720e-58
Identity = 104/145 (71.72%), Postives = 118/145 (81.38%), Query Frame = 0 
Query:   29 PCATPKGYRAIALDITPTTWQADLSKCNVCEERFTWLNHRHKCRSCMEAVCNSCSKDRKVLRARTAPKRVCDTCIKNCWTPRDSAAAPRKPMAADVAATKPAGKDGRRVSLTVSASDANACPIDATATAPLSPGTPATAGFFGPG 173
            PCATP+G+R I L ITP+TW+ DL+KCNVC +RFTWLNHRHKCR+C +AVCNSC+K RKV+RARTAPKRVCDTCI+NCWTPR  A    KP AA  +    A  D RRVSLTVS SD + CP+DATATAPLSPGTPA AGFFGPG
Sbjct:   31 PCATPRGFREIPLQITPSTWKTDLTKCNVCGDRFTWLNHRHKCRNCWQAVCNSCAKSRKVIRARTAPKRVCDTCIQNCWTPRTPAVT--KPAAAAGSVVTKADGD-RRVSLTVSTSDGS-CPVDATATAPLSPGTPAAAGFFGPG 171
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BLAST of mRNA_L-elsbetiae_contig8380.17383.1 vs. uniprot
Match: D7G5L4_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L4_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 5.500e-26
Identity = 50/80 (62.50%), Postives = 61/80 (76.25%), Query Frame = 0 
Query:    8 KHELTLDAPDVTVQRTSPCATPCATPKGYRAIALDITPTTWQADLSKCNVCEERFTWLNHRHKCRSCMEAVCNSCSKDRK 87
            K  LTLD  D   Q+ +    PCATP+G+R I L ITP+TW+ DL+KCNVC +RFTWLNHRHKCR+C +AVCNSC+K RK
Sbjct:    5 KLRLTLDEEDQAKQQQTK---PCATPRGFREIPLQITPSTWKTDLTKCNVCGDRFTWLNHRHKCRNCWQAVCNSCAKSRK 81
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BLAST of mRNA_L-elsbetiae_contig8380.17383.1 vs. uniprot
Match: D7G5L3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L3_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 1.600e-6
Identity = 28/41 (68.29%), Postives = 33/41 (80.49%), Query Frame = 0 
Query:  392 EGGPMMVKIPEWSGVVFSGVAIGTGIATAVLLRSAFSLVRF 432
            EGGPMMVK+  W+GVV   VAIGTG+A AV++RSA SLV F
Sbjct:  150 EGGPMMVKLTPWTGVVMGAVAIGTGVAIAVVVRSAVSLVFF 190
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BLAST of mRNA_L-elsbetiae_contig8380.17383.1 vs. uniprot
Match: A0A024TT53_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TT53_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.880e-5
Identity = 29/74 (39.19%), Postives = 47/74 (63.51%), Query Frame = 0 
Query:   35 GYRAIALDITPTTWQADLSKCNVCEERFTWLNHRHKCRSCMEAVCNSCSKDRKVLRARTAPK----RVCDTCIK 104
            G   I + +T +T++ D ++C+VC + F    H+H+CR+C  AVC SC+  +K + +R APK    RVCD C++
Sbjct:    5 GMNGIQIAMTNSTFE-DANECSVCLKGFYAFRHKHRCRTCGNAVCRSCASSQKRVTSR-APKNDSSRVCDKCVR 76
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8380.17383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J9Z0_9PHAE1.720e-5871.72FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G5L4_ECTSI5.500e-2662.50FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G5L3_ECTSI1.600e-668.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A024TT53_9STRA1.880e-539.19Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 326..364
NoneNo IPR availablePANTHERPTHR39490:SF6ARRESTIN DOMAIN-CONTAINING PROTEIN Dcoord: 43..124
NoneNo IPR availablePANTHERPTHR39490FAMILY NOT NAMEDcoord: 43..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..402
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 403..423
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 424..433
NoneNo IPR availableTMHMMTMhelixcoord: 405..427
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 43..108
e-value: 1.7E-7
score: 40.9
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 48..105
e-value: 6.0E-10
score: 39.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 37..119
e-value: 1.2E-13
score: 52.5
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 49..105
score: 10.76
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 49..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8380contigL-elsbetiae_contig8380:942..3451 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8380.17383.1mRNA_L-elsbetiae_contig8380.17383.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8380 942..3543 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8380.17383.1 ID=prot_L-elsbetiae_contig8380.17383.1|Name=mRNA_L-elsbetiae_contig8380.17383.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=434bp
MSFSAAKKHELTLDAPDVTVQRTSPCATPCATPKGYRAIALDITPTTWQA
DLSKCNVCEERFTWLNHRHKCRSCMEAVCNSCSKDRKVLRARTAPKRVCD
TCIKNCWTPRDSAAAPRKPMAADVAATKPAGKDGRRVSLTVSASDANACP
IDATATAPLSPGTPATAGFFGPGCVTPSATTAALAPPVQGAANKNTTTAT
GNVDTRPPSSSSCRRHRRQVSVAMPPVSLLTSPAASASSMMMPPPPTPAA
AAAAAADGEKKVEETDDMPPSAAGTPSSLFAPPPPSFFGGRRVGGGNRGS
RRESSGGRLESGVWGDGLALGGGGDVDKAVAELQQLQEEVVAELQKLDEE
IEEAGGEGQQAEAAVSAPAAAPAALPEGPAEEEEEEEGDYGEGGPMMVKI
PEWSGVVFSGVAIGTGIATAVLLRSAFSLVRFN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD