prot_L-elsbetiae_contig8372.17372.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8372.17372.1
Unique Nameprot_L-elsbetiae_contig8372.17372.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length267
Homology
BLAST of mRNA_L-elsbetiae_contig8372.17372.1 vs. uniprot
Match: D8LJZ7_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJZ7_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 2.500e-77
Identity = 177/267 (66.29%), Postives = 186/267 (69.66%), Query Frame = 0
Query:    1 VVIPDTIRHLCIPLTGGDFFSRLEGLAAAVRELQPRRPLIFVPPQERVTAVVAHLRRAGGSVGARAVALHEAMGFVSDXXXXXXXXXXVHDRHASEAIQRHDTL-AGQFKGAGVPYSAVAAXXXXXXXXXXXXXXXXXXXXXXTGGEFGPPAGVSTXXXXXXXXXXXXXXXLLXXXXXXXGEAGDVLVTGEDSARGLHFDDVDFVFIMQKPRSPDEYVHLAGRTGXXXXXXXXXXXXEFNEFRKLQGWSSSLKINFEPLDILNVVKR 266
            VVIPDTIRH C+PL  GDFFSRLEGL AAVRELQPRRPLIFVPPQERVTAVVAHLRRAGG+VGARAVALHEAMGFVSD          V  RH SEAI++HD L AGQ    G        XXXXXXXXXXXXX          GG        S                +         E GDVLVTGE SARGLHFDDVDFVF+MQKP+SPDEYVHLAGRTGXXXXXXXXXXXX    FRKLQGWS SLK+NFEPLDILNV+KR
Sbjct:  574 VVIPDTIRHYCVPLGDGDFFSRLEGLTAAVRELQPRRPLIFVPPQERVTAVVAHLRRAGGAVGARAVALHEAMGFVSDEDFGV-----VRGRHFSEAIEQHDRLVAGQSLAGGGEGGGREPXXXXXXXXXXXXXADESGVVTGAGG--------SGSSSGHLLAGGVGPGGMRLRNGDGDAEVGDVLVTGEGSARGLHFDDVDFVFLMQKPKSPDEYVHLAGRTGXXXXXXXXXXXXXXXXFRKLQGWSYSLKVNFEPLDILNVLKR 827          
BLAST of mRNA_L-elsbetiae_contig8372.17372.1 vs. uniprot
Match: A0A7S2Y0L3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0L3_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 9.980e-14
Identity = 42/80 (52.50%), Postives = 58/80 (72.50%), Query Frame = 0
Query:  181 EAGDVLVTGEDSARGLHFDDVDFVFIMQKPRSPDEYVHLAGRTGXXXXXXXXXXXXEFNEFRKLQGWSSSLKINFEPLDI 260
            E   +LV  ED+ARGLHF++VD+VF++ KP++PDEY+HLAGRTGXXXXXXX      F E +K++ W   L +  E L++
Sbjct:  614 ERPPLLVASEDTARGLHFNEVDYVFLLAKPKTPDEYLHLAGRTGXXXXXXXVVTVISFREVKKMKAWKKILGVELEELEL 693          
BLAST of mRNA_L-elsbetiae_contig8372.17372.1 vs. uniprot
Match: A0A7S2HEN2_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HEN2_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 5.210e-13
Identity = 34/77 (44.16%), Postives = 42/77 (54.55%), Query Frame = 0
Query:  183 GDVLVTGEDSARGLHFDDVDFVFIMQKPRSPDEYVHLAGRTGXXXXXXXXXXXXEFNEFRKLQGWSSSLKINFEPLD 259
            G VLV  EDS RGLH D +D+V ++ +PR PDEY H+AGRTG             F +   L  W   L + F PLD
Sbjct:   52 GYVLVCNEDSVRGLHLDGLDYVIVVGRPRGPDEYTHIAGRTGRAGKRGTVVNVVSFEQAAALTSWEKMLDVEFIPLD 128          
BLAST of mRNA_L-elsbetiae_contig8372.17372.1 vs. uniprot
Match: A0A7S0AXH7_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AXH7_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 8.560e-13
Identity = 33/79 (41.77%), Postives = 45/79 (56.96%), Query Frame = 0
Query:  181 EAGDVLVTGEDSARGLHFDDVDFVFIMQKPRSPDEYVHLAGRTGXXXXXXXXXXXXEFNEFRKLQGWSSSLKINFEPLD 259
            + G + VTGEDS RGLH D++D V  + +PR PDEY H+AGRTG             + +   L  W S L ++F PL+
Sbjct:   16 DEGYLYVTGEDSVRGLHLDNLDTVICVGRPRGPDEYTHIAGRTGRAGNKGTVINVVGYEQANALTSWESMLDVSFYPLE 94          
BLAST of mRNA_L-elsbetiae_contig8372.17372.1 vs. uniprot
Match: A0A7S4N6Z0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N6Z0_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.740e-12
Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 0
Query:  180 GEAGDVLVTGEDSARGLHFDDVDFVFIMQKPRSPDEYVHLAGRTGXXXXXXXXXXXXEFNEFRKLQGWSSSLKINFEPLD 259
            GE G +LVTGED+ RGLH D +D V ++ +P  PDEY H+AGRTG             + +   L  W   L ++F P+D
Sbjct:   90 GEDGYLLVTGEDTVRGLHLDGLDSVIVVGRPHGPDEYTHIAGRTGRAGRGGDVINVVSYEQAAALASWEKMLGVDFIPMD 169          
BLAST of mRNA_L-elsbetiae_contig8372.17372.1 vs. uniprot
Match: A0A7S2DFC3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFC3_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.470e-11
Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 0
Query:  185 VLVTGEDSARGLHFDDVDFVFIMQKPRSPDEYVHLAGRTGXXXXXXXXXXXXEFNEFRKLQGWSSSL 251
            +LV  EDSARGLH D +D VF++ +P+  DEY+HLAGRTG             F E   LQGW + +
Sbjct:   58 LLVANEDSARGLHLDAIDVVFVLSRPKGADEYLHLAGRTGRCGLKGKVVSFLSFREANALQGWGTQI 124          
BLAST of mRNA_L-elsbetiae_contig8372.17372.1 vs. uniprot
Match: A0A7S2EDS3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EDS3_TRICV)

HSP 1 Score: 70.1 bits (170), Expect = 1.240e-10
Identity = 30/79 (37.97%), Postives = 43/79 (54.43%), Query Frame = 0
Query:  181 EAGDVLVTGEDSARGLHFDDVDFVFIMQKPRSPDEYVHLAGRTGXXXXXXXXXXXXEFNEFRKLQGWSSSLKINFEPLD 259
            + G + VTGED+ RGLH D +D V ++ +P  PDEY H+AGRTG             + +   +  W   L ++F PLD
Sbjct:  151 DGGYLFVTGEDTVRGLHLDGLDTVVVVGRPHGPDEYTHIAGRTGRAGRKGDVINVVSYEQASAMSSWERMLDVDFIPLD 229          
BLAST of mRNA_L-elsbetiae_contig8372.17372.1 vs. uniprot
Match: A0A0G4EJG7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJG7_VITBC)

HSP 1 Score: 70.9 bits (172), Expect = 2.830e-10
Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 0
Query:  185 VLVTGEDSARGLHFDDVDFVFIMQKPRSPDEYVHLAGRTGXXXXXXXXXXXXEFNEFRKLQGWSSSLKINFEPLDI 260
            +LV   D ARGLHF+ VD VF++ +PR+PDEY HLAGRTG            +  E R L  W   L I+  PL +
Sbjct:  381 LLVASMDGARGLHFNQVDMVFVLGRPRTPDEYQHLAGRTGRQGAGGTAVIIGDSFEVRSLLAWRKMLGIDIRPLRV 456          
BLAST of mRNA_L-elsbetiae_contig8372.17372.1 vs. uniprot
Match: K0RKD7_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RKD7_THAOC)

HSP 1 Score: 69.7 bits (169), Expect = 8.210e-10
Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 0
Query:  183 GDVLVTGEDSARGLHFDDVDFVFIMQKPRSPDEYVHLAGRTGXXXXXXXXXXXXEFNEFRKLQGWSSSLKINFEPLD 259
            G +LVT ED+ RGLH D +D V ++ +P SPDEY H+AGRTG             F +   L  W+  L ++F P+D
Sbjct:  712 GYLLVTHEDNVRGLHLDRLDAVVVVGRPGSPDEYTHIAGRTGRAGRKGSVLNIVSFEQAAALASWTKMLGVDFMPID 788          
BLAST of mRNA_L-elsbetiae_contig8372.17372.1 vs. uniprot
Match: A0A1Z5JEC7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEC7_FISSO)

HSP 1 Score: 69.3 bits (168), Expect = 1.020e-9
Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 0
Query:  182 AGDVLVTGEDSARGLHFDDVDFVFIMQKPRSPDEYVHLAGRTGXXXXXXXXXXXXEFNEFRKLQGWSSSLKINFEPL 258
            +G VLVTGED+ RGLH D +D+V ++ +P  PDEY H+AGRTG              ++   L  WS  L + F  +
Sbjct:  542 SGYVLVTGEDTVRGLHLDGLDYVLVLGRPNGPDEYTHIAGRTGRAGTPGKVFSIMSESDSASLVSWSRMLGVEFHTI 618          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8372.17372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJZ7_ECTSI2.500e-7766.29DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A7S2Y0L3_9STRA9.980e-1452.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2HEN2_9STRA5.210e-1344.16Hypothetical protein n=2 Tax=Helicotheca tamesis T... [more]
A0A7S0AXH7_9STRA8.560e-1341.77Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S4N6Z0_9STRA1.740e-1241.25Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2DFC3_9STRA1.470e-1146.27Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2EDS3_TRICV1.240e-1037.97Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A0G4EJG7_VITBC2.830e-1044.74Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
K0RKD7_THAOC8.210e-1041.56Uncharacterized protein n=2 Tax=Thalassiosira ocea... [more]
A0A1Z5JEC7_FISSO1.020e-940.26Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 184..227
e-value: 2.8E-8
score: 34.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 89..266
score: 9.623
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 182..243
NoneNo IPR availablePANTHERPTHR24031:SF656coord: 182..243
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 34..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8372contigL-elsbetiae_contig8372:1248..2048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8372.17372.1mRNA_L-elsbetiae_contig8372.17372.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8372 1248..2048 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8372.17372.1 ID=prot_L-elsbetiae_contig8372.17372.1|Name=mRNA_L-elsbetiae_contig8372.17372.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=267bp
VVIPDTIRHLCIPLTGGDFFSRLEGLAAAVRELQPRRPLIFVPPQERVTA
VVAHLRRAGGSVGARAVALHEAMGFVSDDDAGGGGGGGVHDRHASEAIQR
HDTLAGQFKGAGVPYSAVAAAVAEAEAEAEAGRGGGGESDGDTGGEFGPP
AGVSTSGSGSGSGSGSGSGSLLAGLGAGAGEAGDVLVTGEDSARGLHFDD
VDFVFIMQKPRSPDEYVHLAGRTGRQGKTGTVVSLVEFNEFRKLQGWSSS
LKINFEPLDILNVVKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase