prot_L-elsbetiae_contig8366.17366.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8366.17366.1
Unique Nameprot_L-elsbetiae_contig8366.17366.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length87
Homology
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BLAST of mRNA_L-elsbetiae_contig8366.17366.1 vs. uniprot
Match: D7FJQ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ8_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 5.040e-30
Identity = 63/87 (72.41%), Postives = 76/87 (87.36%), Query Frame = 0 
Query:    1 KLRNSKRQRSRSNRRERILKKGQPPAVGDVVQGYVRKVERSMLLVDVMFPELSVLRANKIRTSGEGGKFVDLSEKTRPGDVITVRIE 87
            KLR+SKRQRSR++RRER+ KKG+  AVGD+V+GYVR+V  SMLLVDVMF +LSVLRA+ IR S EG KFV+LS KT+PGD+ITVRIE
Sbjct:  223 KLRDSKRQRSRNSRRERLHKKGRRHAVGDIVEGYVREVHESMLLVDVMFAQLSVLRASNIRNSEEGQKFVNLSNKTKPGDLITVRIE 309
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8366.17366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJQ8_ECTSI5.040e-3072.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 24..87
e-value: 5.9E-6
score: 28.2
IPR003029S1 domainPROSITEPS50126S1coord: 28..87
score: 9.649
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 25..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8366contigL-elsbetiae_contig8366:4512..6214 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8366.17366.1mRNA_L-elsbetiae_contig8366.17366.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8366 4510..6214 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8366.17366.1 ID=prot_L-elsbetiae_contig8366.17366.1|Name=mRNA_L-elsbetiae_contig8366.17366.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp
KLRNSKRQRSRSNRRERILKKGQPPAVGDVVQGYVRKVERSMLLVDVMFP
ELSVLRANKIRTSGEGGKFVDLSEKTRPGDVITVRIE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003029S1_domain
IPR012340NA-bd_OB-fold