prot_L-elsbetiae_contig833.17337.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig833.17337.1
Unique Nameprot_L-elsbetiae_contig833.17337.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length211
Homology
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BLAST of mRNA_L-elsbetiae_contig833.17337.1 vs. uniprot
Match: D8LLP2_ECTSI (Protein cereblon n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLP2_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 1.510e-65
Identity = 122/183 (66.67%), Postives = 132/183 (72.13%), Query Frame = 0 
Query:    5 RQAARHLGVVNRLDSRSGGLLVRTSPVGTTAEIRSGYGGSAGDDADGGG-----GGFAVMARGRHRFRLVEDLGWRRGVRYWKVIICPDLCPGPLRPPIPRAFRDFPGPTR-------GGCYHWAMATPRFVVEKNSPAGLAARAVSLLREQREPLQHGLPPXXXXXXXGARAGSGSVREEGA 175
            +QAARHLGVVNRLDSR GG  V  SPVGTTAE+RSG+GGSA +DADGGG     GG A+MARGRHRFRLVEDLGWRRGV YWKV+ICPD CPG  RPP+PRAFR+FPG  R        G  HW MA PRF V  NSPA LAARA SLLREQREPL HG P           +G+  V EEGA
Sbjct:  133 QQAARHLGVVNRLDSRRGGPHVGASPVGTTAEVRSGHGGSA-EDADGGGEXXXXGGLAMMARGRHRFRLVEDLGWRRGVLYWKVVICPDHCPGTFRPPVPRAFREFPGTDRRGRRRRRDGGNHWPMAVPRFAVVANSPAVLAARAASLLREQREPLPHGAP-----------SGAPQVEEEGA 303
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BLAST of mRNA_L-elsbetiae_contig833.17337.1 vs. uniprot
Match: A0A6H5KP54_9PHAE (CULT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP54_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 3.240e-53
Identity = 108/178 (60.67%), Postives = 115/178 (64.61%), Query Frame = 0 
Query:    5 RQAARHLGVVNRLDSRSGGLLVRTSPVGTTAEIRSGYGGSAGDDADGG----GGGFAVMARGRHRFRLVEDLGWRRGVRYWKVIICPDLCPGPLRPPIPRAFRDFPGP------TRGGCYHWAMATPRFVVEKNSPAGLAARAVSLLREQREPLQHGLPPXXXXXXXG-ARAGSGSVR 171
            +QAARHLGVVNRLDSR              AE+RSG   SA D A GG    GGG A+MARGRHRFRLVEDLGWRRGVRYWKV+IC D CPG  +PP+PRAFR+FPG        R G  HW MA PRF V  NSPA LAARA SLLREQREPL HG          G AR G   VR
Sbjct:  192 QQAARHLGVVNRLDSRXXXXXXXXXXXXXXAEVRSGXXXSAEDAAGGGEGGDGGGLAMMARGRHRFRLVEDLGWRRGVRYWKVVICSDHCPGTFQPPVPRAFREFPGTGRRGRRRRDGGNHWTMAVPRFAVVANSPAVLAARAASLLREQREPLPHGATSGAPQVEEGGARNGGEGVR 369
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig833.17337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLP2_ECTSI1.510e-6566.67Protein cereblon n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5KP54_9PHAE3.240e-5360.67CULT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig833contigL-elsbetiae_contig833:26012..27168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig833.17337.1mRNA_L-elsbetiae_contig833.17337.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig833 26012..27169 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig833.17337.1 ID=prot_L-elsbetiae_contig833.17337.1|Name=mRNA_L-elsbetiae_contig833.17337.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp
ETGDRQAARHLGVVNRLDSRSGGLLVRTSPVGTTAEIRSGYGGSAGDDAD
GGGGGFAVMARGRHRFRLVEDLGWRRGVRYWKVIICPDLCPGPLRPPIPR
AFRDFPGPTRGGCYHWAMATPRFVVEKNSPAGLAARAVSLLREQREPLQH
GLPPPPPGGAAGARAGSGSVREEGAAAEALEERGVLRSQSQAPSPPPPPR
GRGGPLRGRRG
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