prot_L-elsbetiae_contig83.17307.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig83.17307.1
Unique Nameprot_L-elsbetiae_contig83.17307.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length98
Homology
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BLAST of mRNA_L-elsbetiae_contig83.17307.1 vs. uniprot
Match: A0A6H5KVF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF2_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.070e-5
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0 
Query:    6 PSSWKEEELLLKIDGEIKARNPNLEA 31
            PS WKEEELLLKIDGEIKAR+PNLEA
Sbjct:  853 PSGWKEEELLLKIDGEIKARSPNLEA 878
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig83.17307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KVF2_9PHAE1.070e-592.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 11..94
e-value: 8.7E-7
score: 30.7
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 12..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig83contigL-elsbetiae_contig83:41805..44987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig83.17307.1mRNA_L-elsbetiae_contig83.17307.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig83 41231..45066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig83.17307.1 ID=prot_L-elsbetiae_contig83.17307.1|Name=mRNA_L-elsbetiae_contig83.17307.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=98bp
MPTHSPSSWKEEELLLKIDGEIKARNPNLEALFKVFDRSNRGTVTEAQFF
SLLDQGLPRIHFTEANITTLAKLFVDRTGCDFGGQVRYKQFMEAVGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair