prot_L-elsbetiae_contig8289.17296.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig8289.17296.1
Unique Name	prot_L-elsbetiae_contig8289.17296.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	413

Homology

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BLAST of mRNA_L-elsbetiae_contig8289.17296.1 vs. uniprot
Match: A0A6H5JP19_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP19_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 5.200e-36
Identity = 146/385 (37.92%), Postives = 205/385 (53.25%), Query Frame = 0

Query:   20 FPLVDKHKELEEVFSILTEVKNTIECCQSTSKPVCLEAMQQLLSLCRSTLNLDKPLKISKVTP---EGGKEKPGALTVELRPVGDLSSTGLETRKAYREAVAARTVKLWYGDKYEENSFLLDMAMAMSPLGRPLNYLDALAGSSGKFGAENGYFTQAPQKIREKVWENIADLAEKSNTEERARKAATSGGNGTDGDXXXXXXXXXXXXXXXXXXXXXXXSSANPQLAAMADMGIFAPLPAEAGSAPSEETPRQEAERAVETWRNAVIPTEFAAALRGIDVCFFWKKHGDTICPQLKPVAQSILGLPPASAVLERDFCIADGFKTRKRSCVGPAYLEMMLFSRANYHLIPNRIPELDASQMKAAIPVRLTDPSKLGQVAQLDVLPE 401
            FPL D  +E+EEV+S+L+E K  IE  Q+T +    +A++  + L   TL+  + L++  V     EG   K   +  E     DL+  G  TR A R+A+ AR +   YG + +    L D  M +SP  R L Y+DAL  S+ K G       ++   I+ K+ E + DL   +    RA  A + GG  +   XXXXXXXXXXXXXXXXXXXXXXX                    ++  + P EE PR+EAE  ++ W  A IP E     R  +   +W+ HG      L+ VAQ++ G+P ++ V+ERDF IAD F  RKR+ + PAYLEM L+ RA++  IP  IP+LD + + AAIP R  DP  + +V  LD   E
Sbjct:  264 FPLGDLRREMEEVYSMLSEFKAVIEYSQTTHEATAQKALEMTVDLLTYTLDPAERLRVYHVVSIGAEGDTTKYDDIEHE-----DLTPIGRNTRVALRKALVARFLPR-YGRELDAGGHLFDRTMLLSPNQRKLRYVDALRSSAAKEGD-----MRSSSAIKAKIKEEVTDLLVAAIEAIRAT-APSDGGVESSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGSDSDMDATPVEEDPRKEAEAMMKEWLAAQIPPEE----RTENGAEYWRLHGKKHPFALRLVAQAVYGVPASAGVVERDFSIADLFMPRKRASLDPAYLEMQLYLRAHFDSIPMDIPKLDDASVAAAIPDRFRDPQAVEEVRVLDFTEE 632

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig8289.17296.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig8289.17296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JP19_9PHAE	5.200e-36	37.92	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 293..360 e-value: 1.5E-4 score: 21.5
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 258..362

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig8289	contig	L-elsbetiae_contig8289:4484..6983 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig8289.17296.1	mRNA_L-elsbetiae_contig8289.17296.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig8289 4478..8018 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig8289.17296.1 ID=prot_L-elsbetiae_contig8289.17296.1|Name=mRNA_L-elsbetiae_contig8289.17296.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=413bp
MLIKFPNLKAFWLDHRDTAFPLVDKHKELEEVFSILTEVKNTIECCQSTS
KPVCLEAMQQLLSLCRSTLNLDKPLKISKVTPEGGKEKPGALTVELRPVG
DLSSTGLETRKAYREAVAARTVKLWYGDKYEENSFLLDMAMAMSPLGRPL
NYLDALAGSSGKFGAENGYFTQAPQKIREKVWENIADLAEKSNTEERARK
AATSGGNGTDGDGNGTGGDGNGTGGNGTSGGTQGASSANPQLAAMADMGI
FAPLPAEAGSAPSEETPRQEAERAVETWRNAVIPTEFAAALRGIDVCFFW
KKHGDTICPQLKPVAQSILGLPPASAVLERDFCIADGFKTRKRSCVGPAY
LEMMLFSRANYHLIPNRIPELDASQMKAAIPVRLTDPSKLGQVAQLDVLP
EAGGGGSDSDTD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf