prot_L-elsbetiae_contig8282.17290.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig8282.17290.1
Unique Name	prot_L-elsbetiae_contig8282.17290.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	168

Homology

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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: D7G4N5_ECTSI (3'-5'-exoribonuclease/ RNA binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4N5_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 5.900e-111
Identity = 161/168 (95.83%), Postives = 163/168 (97.02%), Query Frame = 0

Query:    1 MAIREGAWQSKNDHDFILRALRSGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 168
            MAIREG WQSKNDHDFILR+LR GRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVG+ RNSPLSVEIARVIE GVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDAC LATMAALRHFRRP
Sbjct:    1 MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168

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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: A0A6H5KDM4_9PHAE (RNase_PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM4_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 3.250e-96
Identity = 152/168 (90.48%), Postives = 158/168 (94.05%), Query Frame = 0

Query:    1 MAIREGAWQSKNDHDFILRALRSGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 168
            MAIREG WQSKND++FILR+LR GRR DGR+LGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRP EGFLHFNVELGPMAAAS+G+ RNSPLSVEIARVIE GVRDSQALDTEALCIIGGEK   LRCDVHILDHGGNLIDAC LATMAALRHFRRP
Sbjct:    1 MAIREGPWQSKNDYEFILRSLRGGRRVDGRELGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPMEGFLHFNVELGPMAAASMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEK---LRCDVHILDHGGNLIDACTLATMAALRHFRRP 165

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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: A0A835ZEC1_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC1_9STRA)

HSP 1 Score: 211 bits (537), Expect = 3.510e-63
Identity = 108/169 (63.91%), Postives = 130/169 (76.92%), Query Frame = 0

Query:    1 MAIREGAWQSKNDHDFILRALRSGR-RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 168
            MAIR+G   + N + F+L  LR G+ R DGR+L  +R +   F R+EGQAS  +Q GRT+ L VV+ EVVPP+PDRPT+G L FNVEL  MA ASVG LR SPL+ EI R+IE G+RDSQALDTE LCI+ GEKVWQLR DVHILD+GGNL+DA ALA +AAL+HFRRP
Sbjct:    1 MAIRDGFTHTINTNAFVLETLRGGKQRIDGRELNTLRQIAFQFTRSEGQASVLVQWGRTQTLAVVSAEVVPPYPDRPTDGALMFNVELSKMAEASVGLLRASPLATEITRIIERGIRDSQALDTETLCIVAGEKVWQLRVDVHILDNGGNLVDAAALAAIAALQHFRRP 169

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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: A0A7S1CIZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIZ9_9STRA)

HSP 1 Score: 187 bits (475), Expect = 7.660e-57
Identity = 94/158 (59.49%), Postives = 118/158 (74.68%), Query Frame = 0

Query:   10 SKNDHDFILRALRSGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRR 167
            S  + DFI  ALRSGRR DGR L D R +   F R   + +AE++LG+TRV+ V T EVVPP+PDRPTEGFL FNVEL PMA+      R SPL+VEI R++E  +RD++A+DTEALCI+ GEKVW LRCDV ++D GGN+IDA AL+ +A+L HFRR
Sbjct:    4 SNVERDFIHHALRSGRRVDGRGLLDRRRVAFKFDRTAARTTAEVRLGKTRVVTVTTAEVVPPYPDRPTEGFLMFNVELSPMASEKFEAGRPSPLAVEIGRIVERCLRDARAIDTEALCIVAGEKVWSLRCDVRVVDDGGNIIDAAALSAVASLCHFRR 161

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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: I2CP19_NANGC (Exosome complex component RRP45 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CP19_NANGC)

HSP 1 Score: 194 bits (492), Expect = 1.190e-55
Identity = 100/167 (59.88%), Postives = 122/167 (73.05%), Query Frame = 0

Query:    3 IREGAWQSKNDHDFILRALRSGR-RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 168
            I++G   S N+ +FIL AL+    RADGR   D R LR+ +ARAEGQA+AEIQLG+TRVL VVT E+ PP+PDRP EGFL+ NVE  PMA   + + R +P  VE+ RVIE  +R S+ALDTEALC+I G KVW LRCDV ILD  GN++DA  LAT+AAL HFR P
Sbjct:    4 IKQGEDMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLP 170

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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: K3X4Z2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4Z2_GLOUD)

HSP 1 Score: 191 bits (484), Expect = 2.180e-55
Identity = 95/171 (55.56%), Postives = 128/171 (74.85%), Query Frame = 0

Query:    1 MAIREGA-WQSKNDHDFILRALRSGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 168
            MAIRE   + S+N+  F+  ++      RADGR+L   R +R+ F R E Q+ AE+QLGRTRV+  V GE+VPPFPDRPTEGFLHFNVEL PMA+ +    R SP++VE+AR+++ G+R+ +ALDTEAL II GEKVW + C++H++DHGGNLID  +LA +AA+ H+RRP
Sbjct:    1 MAIREEHDFLSENERKFLFDSIHDAPHVRADGRELMHQRKIRVQFRRTEEQSQAEVQLGRTRVIANVHGEIVPPFPDRPTEGFLHFNVELSPMASQNFEVGRPSPMAVELARIVDRGIRECRALDTEALAIIAGEKVWAITCNIHVVDHGGNLIDCVSLAAIAAMMHYRRP 171

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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: A0A8K1C7Y8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Y8_PYTOL)

HSP 1 Score: 189 bits (480), Expect = 6.280e-55
Identity = 94/171 (54.97%), Postives = 128/171 (74.85%), Query Frame = 0

Query:    1 MAIREGA-WQSKNDHDFILRALRSGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 168
            MAIRE   + S+N+  F+  ++      RADGR+L   R +R+ F R + Q+ AE+QLGRTRV+  V GE+VPPFPDRPTEGFLHF+VEL PMA+ +    R SPL+VE+AR+++ G+R+ +ALDTEAL I+ GEKVW + C++H++DHGGNLID  +LA +AA+ HFRRP
Sbjct:    1 MAIREEYDFVSENERKFLFDSIHDKPHIRADGRELMQQRKIRVQFRRMDDQSQAEVQLGRTRVIANVHGEIVPPFPDRPTEGFLHFSVELSPMASQNFEVGRPSPLAVELARIVDRGIRECRALDTEALAIVAGEKVWSITCNIHVVDHGGNLIDCVSLAAIAAMMHFRRP 171

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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: A0A2D4C8I4_PYTIN (Exosome complex exonuclease RRP45-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8I4_PYTIN)

HSP 1 Score: 186 bits (472), Expect = 1.060e-53
Identity = 91/171 (53.22%), Postives = 126/171 (73.68%), Query Frame = 0

Query:    1 MAIREGA-WQSKNDHDFILRALRSGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 168
            MAIRE   + S+N+  F+  ++      R DGR+L   R +R+ F R + Q+ AE+Q+GRTRV+  V GE+VPPFPDRPTEGFLHFNVEL PMA+ +    R SPL++E+AR+++ G+R+ +ALDTEAL I+ GEKVW + C +H++DHGGNLID  +LA +AA+ H+RRP
Sbjct:    1 MAIREEHDFLSENERAFLFHSIHDKPHIRPDGRELMQQRKIRVQFRRNDDQSQAEVQIGRTRVIANVHGEIVPPFPDRPTEGFLHFNVELSPMASQNFEVGRPSPLAIELARIVDRGIRECRALDTEALAIVAGEKVWSITCTIHVVDHGGNLIDCVSLAAIAAMMHYRRP 171

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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: A0A3M6VKF7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKF7_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.200e-53
Identity = 95/178 (53.37%), Postives = 129/178 (72.47%), Query Frame = 0

Query:    1 MAIREGA-WQSKNDHDFILRALRSGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVG-------DLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 168
            MA+R+   + S+N+  F+   LR     RADGR+L   R +R+ F R+E ++ AE+QLGRTRV+G V GE+VPPFPDRPTEGFLHF+VEL PMA+ S            +S ++ E+AR++E GVR+S+ALDTEAL ++ GEKVW + C VH++DHGGNL+DA +LA +AAL H+RRP
Sbjct:    1 MALRDDHDFLSENERQFLANCLRQSPHVRADGRELLQQRKIRVQFRRSESESQAEVQLGRTRVIGNVHGEIVPPFPDRPTEGFLHFSVELSPMASPSFDASSSASRGAASSVVAAELARLVERGVRESRALDTEALAVVAGEKVWAITCHVHVVDHGGNLVDAASLAAIAALMHYRRP 178

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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: G4ZFL2_PHYSP (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=G4ZFL2_PHYSP)

HSP 1 Score: 186 bits (471), Expect = 2.410e-53
Identity = 99/178 (55.62%), Postives = 129/178 (72.47%), Query Frame = 0

Query:    1 MAIR-EGAWQSKNDHDFILRALRSGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMA------AASVG-DLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 168
            MA+R E  + S+N+  F+   LR     RADGR+L   R +R+ F R+E ++ AE+QLGRTRV+G V GE+VPPFPDRPTEGFLHF VEL PMA      AAS G    +S  + E+AR++E GVR+S+ALDTEAL ++ GEKVW + C VH++DHGGNL+DA +LA +AAL H+RRP
Sbjct:    1 MALRDEHDFLSENERQFLANCLRQPPHVRADGRELLQQRKIRVQFRRSETESQAEVQLGRTRVIGNVHGEIVPPFPDRPTEGFLHFAVELSPMASPSFEAAASAGRGAASSVAAAELARLVERGVRESRALDTEALAVVAGEKVWAITCHVHVVDHGGNLVDAASLAAIAALMHYRRP 178

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G4N5_ECTSI	5.900e-111	95.83	3'-5'-exoribonuclease/ RNA binding n=1 Tax=Ectocar...	[more]
A0A6H5KDM4_9PHAE	3.250e-96	90.48	RNase_PH domain-containing protein n=1 Tax=Ectocar...	[more]
A0A835ZEC1_9STRA	3.510e-63	63.91	Ribosomal protein S5 domain 2-type protein n=1 Tax...	[more]
A0A7S1CIZ9_9STRA	7.660e-57	59.49	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
I2CP19_NANGC	1.190e-55	59.88	Exosome complex component RRP45 n=3 Tax=Monodopsid...	[more]
K3X4Z2_GLOUD	2.180e-55	55.56	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A8K1C7Y8_PYTOL	6.280e-55	54.97	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A2D4C8I4_PYTIN	1.060e-53	53.22	Exosome complex exonuclease RRP45-like protein n=1...	[more]
A0A3M6VKF7_9STRA	1.200e-53	53.37	Uncharacterized protein n=1 Tax=Peronospora effusa...	[more]
G4ZFL2_PHYSP	2.410e-53	55.62	Uncharacterized protein n=8 Tax=Phytophthora TaxID...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 7..168 e-value: 3.3E-52 score: 179.6
IPR001247	Exoribonuclease, phosphorolytic domain 1	PFAM	PF01138	RNase_PH	coord: 43..168 e-value: 1.5E-18 score: 67.5
None	No IPR available	PANTHER	PTHR11097:SF14	EXOSOME COMPLEX COMPONENT RRP45	coord: 10..168
None	No IPR available	PANTHER	PTHR11097	EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN	coord: 10..168
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 8..168

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig8282	contig	L-elsbetiae_contig8282:3671..8246 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig8282.17290.1	mRNA_L-elsbetiae_contig8282.17290.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig8282 3671..8246 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig8282.17290.1 ID=prot_L-elsbetiae_contig8282.17290.1|Name=mRNA_L-elsbetiae_contig8282.17290.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=168bp
MAIREGAWQSKNDHDFILRALRSGRRADGRQLGDMRLLRMVFARAEGQAS
AEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRN
SPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNL
IDACALATMAALRHFRRP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027408	PNPase/RNase_PH_dom_sf
IPR001247	ExoRNase_PH_dom1
IPR020568	Ribosomal_S5_D2-typ_fold