mRNA_L-elsbetiae_contig8282.17290.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8282.17290.1
Unique NamemRNA_L-elsbetiae_contig8282.17290.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: D7G4N5_ECTSI (3'-5'-exoribonuclease/ RNA binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4N5_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 5.900e-111
Identity = 161/168 (95.83%), Postives = 163/168 (97.02%), Query Frame = 1 
Query:    1 MAIREGAWQSKNDHDFILRALRSGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 504
            MAIREG WQSKNDHDFILR+LR GRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVG+ RNSPLSVEIARVIE GVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDAC LATMAALRHFRRP
Sbjct:    1 MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168
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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: A0A6H5KDM4_9PHAE (RNase_PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM4_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 3.250e-96
Identity = 152/168 (90.48%), Postives = 158/168 (94.05%), Query Frame = 1 
Query:    1 MAIREGAWQSKNDHDFILRALRSGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 504
            MAIREG WQSKND++FILR+LR GRR DGR+LGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRP EGFLHFNVELGPMAAAS+G+ RNSPLSVEIARVIE GVRDSQALDTEALCIIGGEK   LRCDVHILDHGGNLIDAC LATMAALRHFRRP
Sbjct:    1 MAIREGPWQSKNDYEFILRSLRGGRRVDGRELGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPMEGFLHFNVELGPMAAASMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEK---LRCDVHILDHGGNLIDACTLATMAALRHFRRP 165
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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: A0A835ZEC1_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC1_9STRA)

HSP 1 Score: 211 bits (537), Expect = 3.510e-63
Identity = 108/169 (63.91%), Postives = 130/169 (76.92%), Query Frame = 1 
Query:    1 MAIREGAWQSKNDHDFILRALRSGR-RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 504
            MAIR+G   + N + F+L  LR G+ R DGR+L  +R +   F R+EGQAS  +Q GRT+ L VV+ EVVPP+PDRPT+G L FNVEL  MA ASVG LR SPL+ EI R+IE G+RDSQALDTE LCI+ GEKVWQLR DVHILD+GGNL+DA ALA +AAL+HFRRP
Sbjct:    1 MAIRDGFTHTINTNAFVLETLRGGKQRIDGRELNTLRQIAFQFTRSEGQASVLVQWGRTQTLAVVSAEVVPPYPDRPTDGALMFNVELSKMAEASVGLLRASPLATEITRIIERGIRDSQALDTETLCIVAGEKVWQLRVDVHILDNGGNLVDAAALAAIAALQHFRRP 169
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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: A0A7S1CIZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIZ9_9STRA)

HSP 1 Score: 187 bits (475), Expect = 7.660e-57
Identity = 94/158 (59.49%), Postives = 118/158 (74.68%), Query Frame = 1 
Query:   28 SKNDHDFILRALRSGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRR 501
            S  + DFI  ALRSGRR DGR L D R +   F R   + +AE++LG+TRV+ V T EVVPP+PDRPTEGFL FNVEL PMA+      R SPL+VEI R++E  +RD++A+DTEALCI+ GEKVW LRCDV ++D GGN+IDA AL+ +A+L HFRR
Sbjct:    4 SNVERDFIHHALRSGRRVDGRGLLDRRRVAFKFDRTAARTTAEVRLGKTRVVTVTTAEVVPPYPDRPTEGFLMFNVELSPMASEKFEAGRPSPLAVEIGRIVERCLRDARAIDTEALCIVAGEKVWSLRCDVRVVDDGGNIIDAAALSAVASLCHFRR 161
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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: I2CP19_NANGC (Exosome complex component RRP45 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CP19_NANGC)

HSP 1 Score: 194 bits (492), Expect = 1.190e-55
Identity = 100/167 (59.88%), Postives = 122/167 (73.05%), Query Frame = 1 
Query:    7 IREGAWQSKNDHDFILRALRSGR-RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 504
            I++G   S N+ +FIL AL+    RADGR   D R LR+ +ARAEGQA+AEIQLG+TRVL VVT E+ PP+PDRP EGFL+ NVE  PMA   + + R +P  VE+ RVIE  +R S+ALDTEALC+I G KVW LRCDV ILD  GN++DA  LAT+AAL HFR P
Sbjct:    4 IKQGEDMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLP 170
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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: K3X4Z2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4Z2_GLOUD)

HSP 1 Score: 191 bits (484), Expect = 2.180e-55
Identity = 95/171 (55.56%), Postives = 128/171 (74.85%), Query Frame = 1 
Query:    1 MAIREGA-WQSKNDHDFILRALRSGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 504
            MAIRE   + S+N+  F+  ++      RADGR+L   R +R+ F R E Q+ AE+QLGRTRV+  V GE+VPPFPDRPTEGFLHFNVEL PMA+ +    R SP++VE+AR+++ G+R+ +ALDTEAL II GEKVW + C++H++DHGGNLID  +LA +AA+ H+RRP
Sbjct:    1 MAIREEHDFLSENERKFLFDSIHDAPHVRADGRELMHQRKIRVQFRRTEEQSQAEVQLGRTRVIANVHGEIVPPFPDRPTEGFLHFNVELSPMASQNFEVGRPSPMAVELARIVDRGIRECRALDTEALAIIAGEKVWAITCNIHVVDHGGNLIDCVSLAAIAAMMHYRRP 171
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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: A0A8K1C7Y8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Y8_PYTOL)

HSP 1 Score: 189 bits (480), Expect = 6.280e-55
Identity = 94/171 (54.97%), Postives = 128/171 (74.85%), Query Frame = 1 
Query:    1 MAIREGA-WQSKNDHDFILRALRSGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 504
            MAIRE   + S+N+  F+  ++      RADGR+L   R +R+ F R + Q+ AE+QLGRTRV+  V GE+VPPFPDRPTEGFLHF+VEL PMA+ +    R SPL+VE+AR+++ G+R+ +ALDTEAL I+ GEKVW + C++H++DHGGNLID  +LA +AA+ HFRRP
Sbjct:    1 MAIREEYDFVSENERKFLFDSIHDKPHIRADGRELMQQRKIRVQFRRMDDQSQAEVQLGRTRVIANVHGEIVPPFPDRPTEGFLHFSVELSPMASQNFEVGRPSPLAVELARIVDRGIRECRALDTEALAIVAGEKVWSITCNIHVVDHGGNLIDCVSLAAIAAMMHFRRP 171
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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: A0A2D4C8I4_PYTIN (Exosome complex exonuclease RRP45-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8I4_PYTIN)

HSP 1 Score: 186 bits (472), Expect = 1.060e-53
Identity = 91/171 (53.22%), Postives = 126/171 (73.68%), Query Frame = 1 
Query:    1 MAIREGA-WQSKNDHDFILRALRSGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 504
            MAIRE   + S+N+  F+  ++      R DGR+L   R +R+ F R + Q+ AE+Q+GRTRV+  V GE+VPPFPDRPTEGFLHFNVEL PMA+ +    R SPL++E+AR+++ G+R+ +ALDTEAL I+ GEKVW + C +H++DHGGNLID  +LA +AA+ H+RRP
Sbjct:    1 MAIREEHDFLSENERAFLFHSIHDKPHIRPDGRELMQQRKIRVQFRRNDDQSQAEVQIGRTRVIANVHGEIVPPFPDRPTEGFLHFNVELSPMASQNFEVGRPSPLAIELARIVDRGIRECRALDTEALAIVAGEKVWSITCTIHVVDHGGNLIDCVSLAAIAAMMHYRRP 171
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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: A0A3M6VKF7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKF7_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.200e-53
Identity = 95/178 (53.37%), Postives = 129/178 (72.47%), Query Frame = 1 
Query:    1 MAIREGA-WQSKNDHDFILRALRSGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVG-------DLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 504
            MA+R+   + S+N+  F+   LR     RADGR+L   R +R+ F R+E ++ AE+QLGRTRV+G V GE+VPPFPDRPTEGFLHF+VEL PMA+ S            +S ++ E+AR++E GVR+S+ALDTEAL ++ GEKVW + C VH++DHGGNL+DA +LA +AAL H+RRP
Sbjct:    1 MALRDDHDFLSENERQFLANCLRQSPHVRADGRELLQQRKIRVQFRRSESESQAEVQLGRTRVIGNVHGEIVPPFPDRPTEGFLHFSVELSPMASPSFDASSSASRGAASSVVAAELARLVERGVRESRALDTEALAVVAGEKVWAITCHVHVVDHGGNLVDAASLAAIAALMHYRRP 178
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BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Match: G4ZFL2_PHYSP (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=G4ZFL2_PHYSP)

HSP 1 Score: 186 bits (471), Expect = 2.410e-53
Identity = 99/178 (55.62%), Postives = 129/178 (72.47%), Query Frame = 1 
Query:    1 MAIR-EGAWQSKNDHDFILRALRSGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMA------AASVG-DLRNSPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACALATMAALRHFRRP 504
            MA+R E  + S+N+  F+   LR     RADGR+L   R +R+ F R+E ++ AE+QLGRTRV+G V GE+VPPFPDRPTEGFLHF VEL PMA      AAS G    +S  + E+AR++E GVR+S+ALDTEAL ++ GEKVW + C VH++DHGGNL+DA +LA +AAL H+RRP
Sbjct:    1 MALRDEHDFLSENERQFLANCLRQPPHVRADGRELLQQRKIRVQFRRSETESQAEVQLGRTRVIGNVHGEIVPPFPDRPTEGFLHFAVELSPMASPSFEAAASAGRGAASSVAAAELARLVERGVRESRALDTEALAVVAGEKVWAITCHVHVVDHGGNLVDAASLAAIAALMHYRRP 178
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8282.17290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4N5_ECTSI5.900e-11195.833'-5'-exoribonuclease/ RNA binding n=1 Tax=Ectocar... [more]
A0A6H5KDM4_9PHAE3.250e-9690.48RNase_PH domain-containing protein n=1 Tax=Ectocar... [more]
A0A835ZEC1_9STRA3.510e-6363.91Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A7S1CIZ9_9STRA7.660e-5759.49Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
I2CP19_NANGC1.190e-5559.88Exosome complex component RRP45 n=3 Tax=Monodopsid... [more]
K3X4Z2_GLOUD2.180e-5555.56Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1C7Y8_PYTOL6.280e-5554.97Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C8I4_PYTIN1.060e-5353.22Exosome complex exonuclease RRP45-like protein n=1... [more]
A0A3M6VKF7_9STRA1.200e-5353.37Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
G4ZFL2_PHYSP2.410e-5355.62Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8282contigL-elsbetiae_contig8282:3671..8246 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score324.3
Seed ortholog evalue3.3e-86
Seed eggNOG ortholog2880.D7G4N5
KEGG koko:K03678,ko:K10397,ko:K12589
KEGG Pathwayko03018,map03018
KEGG ModuleM00390,M00391
Hectar predicted targeting categoryother localisation
GOsGO:0000175,GO:0000176,GO:0000177,GO:0000178,GO:0000184,GO:0000288,GO:0000291,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016075,GO:0016078,GO:0016180,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017091,GO:0019222,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0031974,GO:0031981,GO:0032991,GO:0034427,GO:0034470,GO:0034472,GO:0034473,GO:0034475,GO:0034476,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043628,GO:0043632,GO:0043633,GO:0043634,GO:0043928,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0070013,GO:0070478,GO:0070481,GO:0070651,GO:0071025,GO:0071027,GO:0071028,GO:0071029,GO:0071035,GO:0071038,GO:0071042,GO:0071046,GO:0071047,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354
EggNOG free text desc.U1 snRNA 3'-end processing
EggNOG OGsCOG2123@1,KOG1614@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04812
Ec32 ortholog descriptionRrp45 is a component of the exosome 3'->5' exoribonuclease complex, a complex that degrades mRNAs.
Ec32 orthologEc-17_001830.1
Exons4
Model size504
Cds size504
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8282.17290.1prot_L-elsbetiae_contig8282.17290.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8282 3671..8246 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816911.8656888-CDS-L-elsbetiae_contig8282:3670..38711622816911.8656888-CDS-L-elsbetiae_contig8282:3670..3871Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8282 3671..3871 +
1691683906.6566646-CDS-L-elsbetiae_contig8282:3670..38711691683906.6566646-CDS-L-elsbetiae_contig8282:3670..3871Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8282 3671..3871 +
1622816911.8770273-CDS-L-elsbetiae_contig8282:5995..60851622816911.8770273-CDS-L-elsbetiae_contig8282:5995..6085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8282 5996..6085 +
1691683906.6700218-CDS-L-elsbetiae_contig8282:5995..60851691683906.6700218-CDS-L-elsbetiae_contig8282:5995..6085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8282 5996..6085 +
1622816911.8889818-CDS-L-elsbetiae_contig8282:7245..73531622816911.8889818-CDS-L-elsbetiae_contig8282:7245..7353Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8282 7246..7353 +
1691683906.6843445-CDS-L-elsbetiae_contig8282:7245..73531691683906.6843445-CDS-L-elsbetiae_contig8282:7245..7353Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8282 7246..7353 +
1622816911.901832-CDS-L-elsbetiae_contig8282:8141..82461622816911.901832-CDS-L-elsbetiae_contig8282:8141..8246Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8282 8142..8246 +
1691683906.7111256-CDS-L-elsbetiae_contig8282:8141..82461691683906.7111256-CDS-L-elsbetiae_contig8282:8141..8246Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8282 8142..8246 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8282.17290.1

>prot_L-elsbetiae_contig8282.17290.1 ID=prot_L-elsbetiae_contig8282.17290.1|Name=mRNA_L-elsbetiae_contig8282.17290.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=168bp
MAIREGAWQSKNDHDFILRALRSGRRADGRQLGDMRLLRMVFARAEGQAS
AEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGDLRN
SPLSVEIARVIETGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNL
IDACALATMAALRHFRRP
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mRNA from alignment at L-elsbetiae_contig8282:3671..8246+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8282.17290.1 ID=mRNA_L-elsbetiae_contig8282.17290.1|Name=mRNA_L-elsbetiae_contig8282.17290.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4576bp|location=Sequence derived from alignment at L-elsbetiae_contig8282:3671..8246+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTATACGAGAGGGTGCTTGGCAAAGCAAGAACGACCATGACTTCAT
CCTCCGAGCCTTGCGGAGCGGACGGCGTGCAGACGGTAGGCAACTCGGAG
ACATGCGGCTGTTGCGGATGGTGTTCGCTCGCGCGGAGGGCCAGGCCAGC
GCCGAGATACAGCTCGGGAGGACGCGGGTGCTGGGAGTGGTGACGGGCGA
GGTAGGGATATTGGTGCGAAGTGGCGTGTTATGTTCTTGTTAGGGCGGTC
ATGTACTGTGTGCTAGCATTTCTTGTGAGAGAGAGGCCATAACCATACCT
ACACGCTGCTGTTTTCTAACGGAGACCTCTCACCAGGAGGATGCTCGCGC
TCTCTCGCATTTCAAAAATTGGTTGTCGTGGTCCGTGCGGTGATGGGAGA
GCCATTGCATTTTCAGTTGCCGCATAGCAGGCTGCTCAGGTGGAGGGCGG
GTGGGAGAACCTGCTACACGCTGCTTGTCTGTCGATGCGTTTCTACGTGT
ACGCCTGCTAAGTTGGTGCAATAGGGAGGGGTGGTAAGCAGCGTATGACA
TGCTAAATCCTACTAACCCTCCCCCCGCCTTCCTCCGAATTAGTTTGGGG
GGTGCATCCAGCCCTGCAATCCTGGTGACCATTTGCAGTACCTACACCAC
CAAGGAAGGATCAAGATCAGGATCAGGATCACTCACACCCTCTTGTTCTA
CGAATTATACCTGCATCCTGCAACCGTAGCTATCGATGTAGATCAGAGAG
GAGACCTTTCCAAAGCAGACGGTTTGAGGTGCATGAAATGCGATTTTCGC
CACTGCTGCATGTACATACATGGTAAGGGTAATGTGTCAACTGTAGACTG
CATATAGTCCTCGTGGACTAAATTTAAGTTTTTTTCACGTCAGCCCGCTA
CAGATCGGAGCATTGTACATCGTACATACATATGTAGCTCTTTCAACCCT
TTTTGGTACTGGAAGCCCGTTTGGAGCAAAATTTGGTGACGCCCAAAATT
TGCCAACTGTTCTCGACCTAGACTTCCAATGGTAGTCTTTGAAACCCGCA
AAACGGCCTGGGGGTACCCTGCCGAGGGGTATGGACACTATACCTGCCCT
ACTTGCCCTGCACACATATCCACAGCAGTGCTGGAGACACAACTGAGTTG
TTGCGGATATCTCGAAAATCTCGGGAATAAAAATTGCCGCGATTCGTACC
TTCCGCGGCGCCCCCGGCGGTCCAGCCGTTTGAGCTGCCAGCACACACCG
CTCTGCTGTCACTCTTGAGAAACGCAGTCTGCTGGGCTTAGAGCGGGTTG
CGTCGCCCGCCACGCTCAATTTTTTTTTTTTTTTTTTCTGCCCATTATTG
GATTTTGTCGTCTGCCCCTCTGGCCCCCATCCTCCACTTCTACTCTAGCT
AGACGACCCAACCGGGGTCACATAGGAGGGGGGGGTTGGACCCCCTCCTG
TTGTGTGTTGTGATGGGTGCTTCGTGTATTTACACACGCACAGCTCAGGG
TCCACGTCATGTCTCTACAGCAGAGAAGTCTGTATTGTCTAGTACGCTAG
TACAGTTCGTACTGCGTTTCAGTATACTTTTTTTCTCCAAATGATGTCGG
GGCTCCGCAGCTGCAATATGGAGAGACTGTTGTTTCTCGACTAAGCAGTG
GGCACCCAGAAGGCGCGATAACTTTTCGGCGATAATTTTTTTTTTTCAGA
GGGCTAGTGTACTAAAAGGGTTAAGTAGTAGAAAAGTTCTTGAATGCAGA
GTGCCATGCGATGATCGCCGGTGATCACGGGTGCCGGGTGGAAGGAAGCG
CACGAGACAGCACCGGCTCAGTCTTCGCCCGCCTAATTACTGCTGTAGGA
CAGCGACTATGTACTGCTGTCTGTCGACCGATACATGTATATATACCACG
TGATCGTCCATAAATGCGGTACGGTACGGCAAACCGTACCGTATTTGCGG
ACGATCACGAAGGTGGCGTTGGTGATGAAGGCCACGCGCCGCGCACACGC
CAGGCTCCCCGCGTGCAGGAACCTCGGAGCTCTGATTGTGTATATATGTA
TTGCACATACATACGTACACGTACCTTGAAAAAATTGTGTACACATAAAC
ATATGTCGCCAAAATAAATGGGAAGGACACACACTCACACACATACACAC
CATGGATGTAATGAAATACATATAGGTATACCTGTCCGCGTTGCGCATCT
AGAAGAACCAACTTGCGTGCACCAAGACTTCCGCTGGCCCCCCTTTAGCG
TCCTCCTTGCCCGCTCCCGTTCCCGTTCCCGTTCCCGCCCCCATCCCGAT
TTGGGGTGTGCGCTTGTAACATAAGGTGGTCCCTCCGTTTCCGGACAGAC
CAACTGAGGGCTTCCTGCACTTCAACGTGGAGCTAGGGCCGATGGCGGCC
GCAAGCGTTGGAGACGTGAGTTTATTTCTGTGTGTTTTCACTAACTGTCC
GATGTTCTTTTTTTCCCCTCTTGTAACATGTGTGCGGTACAACGGGTGGG
GAGGGCTAGATTGGCGGGCCTGACCGGCGAGAACCCGGCGCGGAACACCC
CGGTATTGTTGGGGTACCGAGATAGATAGAATCGGGGGGTGTGTCCCCCG
CGGTTGGTGGTGTTGGCTTTCCACTTGCGTTTTTCACTTCGCATACATGG
CGTGTAGAGAGGAGCGGAGGGCTCCAGACCTAGCTGTGTCTGACCCATTG
CTTTTTGTGCTTTGTGGACCCTTCGGGTATACCTTTTATGTACTTTATTT
TTTTCAGTATATATACCCTTTTTAGGGTAAGTTATCCTATGTATGTCCTT
CCCATTTATTTTGGCGACAGTCCCCCCAAGTGGAGACAGACGTGTACTAC
ACCTTGCGGTGTACTTGGAGGTACTACACTGCAGTGCATTTGTCTGTACA
ACTAGAACCAACCGGGGTCACACAGGAGGGGGTGAACACTGGGGCTTTTT
TCTTCTTTTTTCTTTTTCTTTTATATTATGACTGCGGGAATCAACTGCGT
CAGTGTTGGATTAGTACGGACTCGGCATGGAGGTACTGGATAGAGAGATC
GGAACGGTTTTTAATGTGAAGACAACAACAACAACAGCGCACGGGTCTGC
CTCTTTCCTTCCTCCTCACGGACTAATCCTTTAACCCGTACATGTGTATC
ATGGACATATCCATCCCATCAGCGACGGTTGAGCGTTGTGGTCGCGTGTT
TAGTTGTTGAAGTATGTAGCTCTTCTCTCGCTCGAACCAAGCGCTTTCCT
TCTCGATAAAATCAAACACCATCAATGTGATCTACCGTGCCCCTCCCCGC
CCCCCCCTCTGCTGTTTGCTGCCCATGCCGTCCACAAAATCAAACGACCA
TAATCCGGAATCGGATCGAATCGAATCGAACCGAATCGAACAGAACGGAA
CGGAACCCACGCTAAATTACCAGCGTTAACGTGATTGGCCGTCCCCCCCC
CCCCCCTCTTGCTGTCTTTGTGCCGCGCTCCCAAAACAAACGACATCCAC
CGGCCGGGACCGGATCGAATGGGATCGAATATTTTAATCGAATCGAATGG
GATGGGATGGGATCAATCCGAGCAGCTACGCAACTCTCCTCTGTCAGTGG
AGATAGCAAGGGTCATCGAGACGGGGGTGAGGGACTCCCAGGCGCTCGAC
ACGGAGGCGCTCTGCATCATCGGGGGGGAAAAGGTAAGCGAATAGCGACG
TCTGTAGACACGGTGCCCCCGAAGCAGCCACGCAACCCCCAAGGACCCCA
TACCGACACGTTTTCTTGTTTTTCTTCCCATTATTGGCTTACTCGTCGTC
TGCCCCACTGCCCCCCTTCCTCCACTTCGACTGGCTAGACGACCCAACCG
GGGTCACACAGGAGGGGGGATGGTGGACCCCCTCCTGCGGTGCCTGCCTG
TGATGTTTTTATCGCGTATGTATGTTTGTATGTATGTATGTGAAAATCGA
CTACTGCCGTGTGCCCACCTGACAGAGTGCTCGGGGGGAGTGAGAGGGTG
AGTGGCGTCCGCGGTCTCGTGTACGAAGTATCTTAGCTTTGACATCTTGG
AGAAAACAATAATACTCCAACGCCAACAGAGGGGCGGGGGGCGTGTACGC
TAGAAGTGAATCCTTGCAGAAGAGTTTCTCTGTTGGGGTTAGGGTTTAGG
GGTTACGGAACCCCTGTCTATTATTTCCTATATATTTATTTAGACGGAAT
TCTTCGCGAAGGACGTCCATCTGAAAACTCCACAAGCCAGCCACCGCTTC
AGGGCACGCTCAACTCCCCCGCCCCCCAGCCAAGTAACTTTCAGCTCGCT
GATCTGAGATACATACCTCCGGAGCGCGGATCGTGTTGAATGCGTCTTGT
GCCCCCCCCCCCACCCCACCCCACCCCGAACTCTCGTCAGCGCACCCCAC
CCGACGGTTGCCCCCGCTCACCCGCCTTCCATGTATATATGTACACATGC
GTCGGGTTTTTTTCGTTCCAGGTTTGGCAGCTGCGGTGCGATGTGCATAT
CCTCGATCACGGCGGCAACCTCATCGACGCTTGCGCGCTGGCCACGATGG
CCGCGCTGCGACACTTCCGACGGCCA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8282:3671..8246+

>mRNA_L-elsbetiae_contig8282.17290.1 ID=mRNA_L-elsbetiae_contig8282.17290.1|Name=mRNA_L-elsbetiae_contig8282.17290.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1008bp|location=Sequence derived from alignment at L-elsbetiae_contig8282:3671..8246+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTATACGAGAGGGTGCTTGGCAAAGCAAGAACGACCATGACTTCAT
CCTCCGAGCCTTGCGGAGCGGACGGCGTGCAGACGGTAGGCAACTCGGAG
ACATGCGGCTGTTGCGGATGGTGTTCGCTCGCGCGGAGGGCCAGGCCAGC
GCCGAGATACAGCTCGGGAGGACGCGGGTGCTGGGAGTGGTGACGGGCGA
GATGGCTATACGAGAGGGTGCTTGGCAAAGCAAGAACGACCATGACTTCA
TCCTCCGAGCCTTGCGGAGCGGACGGCGTGCAGACGGTAGGCAACTCGGA
GACATGCGGCTGTTGCGGATGGTGTTCGCTCGCGCGGAGGGCCAGGCCAG
CGCCGAGATACAGCTCGGGAGGACGCGGGTGCTGGGAGTGGTGACGGGCG
AGGTGGTCCCTCCGTTTCCGGACAGACCAACTGAGGGCTTCCTGCACTTC
AACGTGGAGCTAGGGCCGATGGCGGCCGCAAGCGTTGGAGACGTGGTCCC
TCCGTTTCCGGACAGACCAACTGAGGGCTTCCTGCACTTCAACGTGGAGC
TAGGGCCGATGGCGGCCGCAAGCGTTGGAGACCTACGCAACTCTCCTCTG
TCAGTGGAGATAGCAAGGGTCATCGAGACGGGGGTGAGGGACTCCCAGGC
GCTCGACACGGAGGCGCTCTGCATCATCGGGGGGGAAAAGCTACGCAACT
CTCCTCTGTCAGTGGAGATAGCAAGGGTCATCGAGACGGGGGTGAGGGAC
TCCCAGGCGCTCGACACGGAGGCGCTCTGCATCATCGGGGGGGAAAAGGT
TTGGCAGCTGCGGTGCGATGTGCATATCCTCGATCACGGCGGCAACCTCA
TCGACGCTTGCGCGCTGGCCACGATGGCCGCGCTGCGACACTTCCGACGG
CCAGTTTGGCAGCTGCGGTGCGATGTGCATATCCTCGATCACGGCGGCAA
CCTCATCGACGCTTGCGCGCTGGCCACGATGGCCGCGCTGCGACACTTCC
GACGGCCA
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