prot_L-elsbetiae_contig828.17287.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig828.17287.1
Unique Nameprot_L-elsbetiae_contig828.17287.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length466
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig828.17287.1 vs. uniprot
Match: D8LTQ7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTQ7_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 4.050e-97
Identity = 279/488 (57.17%), Postives = 311/488 (63.73%), Query Frame = 0 
Query:    1 MELWEMEKQINKPWRNLYWEQRVALPVRERLKKHAGYVEHGIDIDAKFGGPAAVENLRRWVRSQRTQELERVEGERQRVPGSPPGRPLSEVQKLRAKVFQEIAAATFDKDGGDGVAD-------GDTEAVAXXXXXXXXXXXXXXXXXXXXVQGGRDAGLVPFASLF-PSSSNGGASSAALSPXXXXXXXXXXXXXXAAPIHGGISA-GSANNIIGAGSDPSSFLRQQYQLHAPSTSATITTPNIPNGVANKPVLPRPSAAAGTGPTHCSIPAPLVNSIDAGGAGXXXXXXXXADPFIAATGTRRSVSETTPEDFRLGGAGLASG-------GXXXXXSQGLPXXXXXXXXKDHTELVGRVMAQIDSLNIPLAATTLLVQSLQAKIANTPGTAGKGKGASSGAA----VGGT---VKEEWKARGGAGLSLEERQLLLEERLQASREAESAQALAERRLKLMEEMRAAGNHQVVTDEVLQKQRLVVLGL 465
            MELWEMEK INKPWR L+WEQRVALPVRE+LK +A Y E G D+D +F G   VENLR+WVRSQRTQELERVEGERQR+PGSPPGRPLSEVQ+LRA+VF+EI AA+ +KDG +GV +       GDT+AVAXXXXXXXXXXXXXXXXXX   Q GRD    PF +LF P   NGG+S+     XXXXXXXXXXX   AA     ISA G + +++ AG   ++         APSTSA                                               XXXXXXXX           R+ SETTPEDFRLG  G   G        XXXXX     XXXX     DHT+LV RVMAQI +LN+PLAAT LLVQSLQAKI +   T G G  A+  AA    +GG     + E  ARGGA  SLEERQLLLEERLQASREAESAQALAERRLKLMEEMRAAGN QVVTDEVLQ QR VVLGL
Sbjct:   75 MELWEMEKSINKPWRMLFWEQRVALPVREKLKSNARYAEMGHDVDLRFSGSFGVENLRKWVRSQRTQELERVEGERQRMPGSPPGRPLSEVQQLRARVFEEITAASLEKDG-EGVGEVPRAVGSGDTQAVAXXXXXXXXXXXXXXXXXXA-TQAGRDPSPEPFGALFAPPGQNGGSSAXXXXXXXXXXXXXXXXKAPAA-----ISAPGLSTSVVVAGGAGAAD-------GAPSTSAGXXXXXXXXXX------------------------------------XXXXXXXXXXXXXXXVSRPRTASETTPEDFRLGSGGAVRGYSTAVAXXXXXXXXXXXXXXXXKRKKVDHTDLVNRVMAQISTLNLPLAATALLVQSLQAKIGSPNFTRGGGSAAAIAAAGVEALGGNGNLAQGERGARGGAS-SLEERQLLLEERLQASREAESAQALAERRLKLMEEMRAAGNDQVVTDEVLQNQRRVVLGL 511
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig828.17287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTQ7_ECTSI4.050e-9757.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig828contigL-elsbetiae_contig828:21090..25422 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig828.17287.1mRNA_L-elsbetiae_contig828.17287.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig828 21051..25738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig828.17287.1 ID=prot_L-elsbetiae_contig828.17287.1|Name=mRNA_L-elsbetiae_contig828.17287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=466bp
MELWEMEKQINKPWRNLYWEQRVALPVRERLKKHAGYVEHGIDIDAKFGG
PAAVENLRRWVRSQRTQELERVEGERQRVPGSPPGRPLSEVQKLRAKVFQ
EIAAATFDKDGGDGVADGDTEAVAAAAAATAAFAGGGGGGGGGGVQGGRD
AGLVPFASLFPSSSNGGASSAALSPAPAPAPAPAPEPAPAAPIHGGISAG
SANNIIGAGSDPSSFLRQQYQLHAPSTSATITTPNIPNGVANKPVLPRPS
AAAGTGPTHCSIPAPLVNSIDAGGAGAGGAGAGGADPFIAATGTRRSVSE
TTPEDFRLGGAGLASGGASGGASQGLPPPPAKKKKKDHTELVGRVMAQID
SLNIPLAATTLLVQSLQAKIANTPGTAGKGKGASSGAAVGGTVKEEWKAR
GGAGLSLEERQLLLEERLQASREAESAQALAERRLKLMEEMRAAGNHQVV
TDEVLQKQRLVVLGL*
back to top