prot_L-elsbetiae_contig8278.17281.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8278.17281.1
Unique Nameprot_L-elsbetiae_contig8278.17281.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length216
Homology
BLAST of mRNA_L-elsbetiae_contig8278.17281.1 vs. uniprot
Match: D7G0D9_ECTSI (IPT/TIG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0D9_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 5.260e-72
Identity = 121/166 (72.89%), Postives = 138/166 (83.13%), Query Frame = 0
Query:   51 KVTLGALASIAPTSRDTCMDGDGTSLTLLADVVRTEIGAFLTSSAGCVVIDYPFRPDPPYVAISAPSAVGYCDDLTLEGIATFASIGSTNITWEVTVVGGDLSADLSNVTRTLGEASTAHHLTVAIPSEFLEQESTFSFVLRVDTILGGSSEAMVEVYKSSLELLV 216
            +VTLG L++IAP+S + C DGDGTSLTLLA VVRTEIGAFLTSSA CVV++YP  PDPP+V ISAP AVGYCDDLTLEG AT  SIGS+N+TWEV + G D + DLSNV+R L EAS+   LTV IPSE L  E+TFSFVLRVDT+LGGSSEA+VEVYKSSL LLV
Sbjct:  171 QVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLTSSAACVVVNYPANPDPPFVDISAPGAVGYCDDLTLEGSATMPSIGSSNVTWEVALAGSDPTVDLSNVSRVLEEASSNKELTVTIPSEHLAVENTFSFVLRVDTVLGGSSEAVVEVYKSSLGLLV 336          
BLAST of mRNA_L-elsbetiae_contig8278.17281.1 vs. uniprot
Match: D7G0D8_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0D8_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 1.310e-43
Identity = 82/115 (71.30%), Postives = 94/115 (81.74%), Query Frame = 0
Query:   51 KVTLGALASIAPTSRDTCMDGDGTSLTLLADVVRTEIGAFLTSSAGCVVIDYPFRPDPPYVAISAPSAVGYCDDLTLEGIATFASIGSTNITWEVTVVGGDLSADLSNVTRTLGE 165
            +VTLG L+SI P+S D C DGDGTSLTLLA VVRTEIGAFLT+SAGCVV+D+P  PDPPYV +SAPSA+GYCDDLTLEG AT  SIG+TN+TWEV + G    AD+ NVTR L E
Sbjct:  131 QVTLGVLSSIVPSSSDACTDGDGTSLTLLAGVVRTEIGAFLTTSAGCVVVDFPATPDPPYVTVSAPSAIGYCDDLTLEGSATSTSIGTTNVTWEVALAGNGQFADIFNVTRHLEE 245          
BLAST of mRNA_L-elsbetiae_contig8278.17281.1 vs. uniprot
Match: A0A6H5JCS7_9PHAE (REJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS7_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 4.820e-14
Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = 0
Query:   87 IGAFLTSSAGCVVIDYPFRPDPPYVAISAPSAVGYCDDLTLEGIATFASIGSTNITWEVTVVG----GDLSADLSNVTR--TLGEASTAHHLTVAIPSEFLEQESTFSFVLRVDTILGGSSEAMVEVYKSS 211
            I AFL+S  GCV +     P+ P V ISAP  VG C +L LEG+A++ S GS+   W V           S  L N     T  + + A    V +PS  L++ ST+ F LRV++ LG S EA +EV+KS+
Sbjct:   13 IEAFLSSEPGCVAVGPALNPNEPVVEISAPKVVGCCSNLVLEGVASYPSTGSSRA-WVVVYCNVAELAVFSRPLLNTVHLVTSRQRAAAKDFVVTLPSTSLDEGSTYIFGLRVESALGVSGEASIEVFKSA 142          
BLAST of mRNA_L-elsbetiae_contig8278.17281.1 vs. uniprot
Match: C1MP01_MICPC (Filamin like protein n=5 Tax=Micromonas pusilla TaxID=38833 RepID=C1MP01_MICPC)

HSP 1 Score: 55.8 bits (133), Expect = 1.760e-5
Identity = 44/146 (30.14%), Postives = 69/146 (47.26%), Query Frame = 0
Query:   20 DAVP--CDLMFSSASVSKLGTGHTCQFTSGSRLKVTLGALASIAPTSRDTCMDGDGTSLTLLADVVRTEIGAFLTSSAGCVVIDYPFRPDPPYVAISAPSAVGYCDDLTLEGIATFASIGSTNITWEVTVVGGDLSADLSNVTRTL 163
            DA P  C  + ++A+ + +GTG TC +     L V  G  A++AP      M G      ++AD   +  GA      G   +  P    PP  +ISAPSAVG CD++  + ++  +  G   + +E  +V  D +AD+  V   L
Sbjct: 3424 DAAPRACAAVLTTATTTAVGTGATCAWADDKTLSVYFGPDATLAPGDHVVLMPG------VIADASGSSHGA-----TGVTRLLAPSSITPPVASISAPSAVGPCDNIAFD-VSGSSGGGGRKLRYEFGIVANDATADVGVVVAAL 3557          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8278.17281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G0D9_ECTSI5.260e-7272.89IPT/TIG domain-containing protein n=1 Tax=Ectocarp... [more]
D7G0D8_ECTSI1.310e-4371.30REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JCS7_9PHAE4.820e-1439.69REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
C1MP01_MICPC1.760e-530.14Filamin like protein n=5 Tax=Micromonas pusilla Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8278contigL-elsbetiae_contig8278:2475..3948 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8278.17281.1mRNA_L-elsbetiae_contig8278.17281.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8278 2475..3950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8278.17281.1 ID=prot_L-elsbetiae_contig8278.17281.1|Name=mRNA_L-elsbetiae_contig8278.17281.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=216bp
QVTVDFTGSSSSQEINGTFDAVPCDLMFSSASVSKLGTGHTCQFTSGSRL
KVTLGALASIAPTSRDTCMDGDGTSLTLLADVVRTEIGAFLTSSAGCVVI
DYPFRPDPPYVAISAPSAVGYCDDLTLEGIATFASIGSTNITWEVTVVGG
DLSADLSNVTRTLGEASTAHHLTVAIPSEFLEQESTFSFVLRVDTILGGS
SEAMVEVYKSSLELLV
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