prot_L-elsbetiae_contig8277.17279.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8277.17279.1
Unique Nameprot_L-elsbetiae_contig8277.17279.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length108
Homology
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BLAST of mRNA_L-elsbetiae_contig8277.17279.1 vs. uniprot
Match: D8LB83_ECTSI (WD-40 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB83_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 6.000e-52
Identity = 96/106 (90.57%), Postives = 98/106 (92.45%), Query Frame = 0 
Query:    7 QELDRESEKLLQCLEAVYSSDRVSEEVVMSVEETLRTAPEVQKMFLQVLRHASSR----SRGPTLLHGPSFETLARFSYTLLCVCVDRVDYSVAHTLLQLTGNYFQ 108
            +ELDR+SEKLLQCLEAVYSSDRVSEEVVM VEETLRT P VQKMFLQVLRHAS R    SRGPTLLHGPSFETLARFSYTLLCVCVDRVDYSVAHTLLQLTGNYFQ
Sbjct: 1697 EELDRDSEKLLQCLEAVYSSDRVSEEVVMDVEETLRTKPVVQKMFLQVLRHASQRGYASSRGPTLLHGPSFETLARFSYTLLCVCVDRVDYSVAHTLLQLTGNYFQ 1802
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BLAST of mRNA_L-elsbetiae_contig8277.17279.1 vs. uniprot
Match: A0A6H5KB05_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB05_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 6.000e-52
Identity = 96/106 (90.57%), Postives = 98/106 (92.45%), Query Frame = 0 
Query:    7 QELDRESEKLLQCLEAVYSSDRVSEEVVMSVEETLRTAPEVQKMFLQVLRHASSR----SRGPTLLHGPSFETLARFSYTLLCVCVDRVDYSVAHTLLQLTGNYFQ 108
            +ELDR+SEKLLQCLEAVYSSDRVSEEVVM VEETLRT P VQKMFLQVLRHAS R    SRGPTLLHGPSFETLARFSYTLLCVCVDRVDYSVAHTLLQLTGNYFQ
Sbjct: 1748 EELDRDSEKLLQCLEAVYSSDRVSEEVVMDVEETLRTKPAVQKMFLQVLRHASRRGYASSRGPTLLHGPSFETLARFSYTLLCVCVDRVDYSVAHTLLQLTGNYFQ 1853
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8277.17279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB83_ECTSI6.000e-5290.57WD-40 repeat protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KB05_9PHAE6.000e-5290.57UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8277contigL-elsbetiae_contig8277:178..1912 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8277.17279.1mRNA_L-elsbetiae_contig8277.17279.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8277 176..1912 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8277.17279.1 ID=prot_L-elsbetiae_contig8277.17279.1|Name=mRNA_L-elsbetiae_contig8277.17279.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp
AGAGDGQELDRESEKLLQCLEAVYSSDRVSEEVVMSVEETLRTAPEVQKM
FLQVLRHASSRSRGPTLLHGPSFETLARFSYTLLCVCVDRVDYSVAHTLL
QLTGNYFQ
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