prot_L-elsbetiae_contig8256.17260.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8256.17260.1
Unique Nameprot_L-elsbetiae_contig8256.17260.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length130
Homology
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BLAST of mRNA_L-elsbetiae_contig8256.17260.1 vs. uniprot
Match: A0A6H5JP54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP54_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 2.430e-13
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 0 
Query:   84 LAFHRMGVRQRNAPPSPPLMSALPPKRPRSPADDHDPSHGKRPRSG 129
            LAFHRMGVRQRN+PPSPPL+SALPPKRPR+P DD  P HGKRPR+G
Sbjct:  500 LAFHRMGVRQRNSPPSPPLVSALPPKRPRTPGDD--PGHGKRPRNG 543
[Close]
BLAST of mRNA_L-elsbetiae_contig8256.17260.1 vs. uniprot
Match: D7FH94_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH94_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.050e-11
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0 
Query:   89 MGVRQRNAPPSPPLMSALPPKRPRSPADDHDPSHGKRPRSG 129
            MGVRQRN+PPSPPL+SALPPKRPR+P DD  P HGKRPR+G
Sbjct:    1 MGVRQRNSPPSPPLVSALPPKRPRTPGDD--PGHGKRPRNG 39
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8256.17260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JP54_9PHAE2.430e-1382.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH94_ECTSI1.050e-1180.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 46..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8256contigL-elsbetiae_contig8256:1596..3846 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8256.17260.1mRNA_L-elsbetiae_contig8256.17260.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8256 1596..3846 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8256.17260.1 ID=prot_L-elsbetiae_contig8256.17260.1|Name=mRNA_L-elsbetiae_contig8256.17260.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp
PHLPVAKRQRYHLEGGSGGGSSGSGGGGGSGGSRRERESHRQVLLLDQQR
QQQQQQQQQHHQQQQQQQQQKARRQEEQELQLQLAFHRMGVRQRNAPPSP
PLMSALPPKRPRSPADDHDPSHGKRPRSG*
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