prot_L-elsbetiae_contig8253.17256.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig8253.17256.1
Unique Name	prot_L-elsbetiae_contig8253.17256.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	122

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A6H5L438_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L438_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 3.340e-70
Identity = 108/121 (89.26%), Postives = 112/121 (92.56%), Query Frame = 0

Query:    1 MVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICAVIPDSADFEAAAREAGKMQEEMDKATGSGGLVF 121
            MVYVERLPEEQQM SGLFLP+KANPRMHVCKVVSVG GREGESGHVTPN AVKPGDLVFVKDP+GIGPRDDEFAGKKFSFVRYTSICAVIP+S DFE AAREAGK+Q EMDKA GSG L F
Sbjct:   63 MVYVERLPEEQQMTSGLFLPAKANPRMHVCKVVSVGNGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVIPNSQDFEDAAREAGKLQAEMDKAAGSG-LAF 182

[Close]

BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: D7FXF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF3_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 2.220e-68
Identity = 105/121 (86.78%), Postives = 112/121 (92.56%), Query Frame = 0

Query:    1 MVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICAVIPDSADFEAAAREAGKMQEEMDKATGSGGLVF 121
            MVYVERLPEEQQM SGLFLP+KANPRMHVCKVVS+G GREGESG+VTPN AVK GDLVFVKDP+GIGPRDDEFAGKKFSFVRYTSICAVIP+S DFE AAREAGK+Q E+DKA GSG LVF
Sbjct:   20 MVYVERLPEEQQMTSGLFLPAKANPRMHVCKVVSIGNGREGESGNVTPNDAVKQGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVIPNSEDFENAAREAGKLQAEIDKAAGSG-LVF 139

[Close]

BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A835ZNU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNU0_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.280e-48
Identity = 78/113 (69.03%), Postives = 93/113 (82.30%), Query Frame = 0

Query:    1 MVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICAVIPDSADFEAAAREAGKMQEEMDKA 113
            MVYVERLPE QQM SGLFLP K NPRMHVCK+VS+G GREGESG +  N+ +KPGDLV+VKDP+GIGP+DDEF+  KFSFVRY +ICAVIP+S  +EA+AR AG+    M +A
Sbjct:   18 MVYVERLPEAQQMTSGLFLPGKENPRMHVCKIVSLGQGREGESGTLVENAGLKPGDLVYVKDPWGIGPKDDEFSNHKFSFVRYQNICAVIPNSDAYEASARAAGEEALAMAQA 130

[Close]

BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A6T5R4I0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5R4I0_HETAK)

HSP 1 Score: 118 bits (296), Expect = 2.750e-31
Identity = 60/120 (50.00%), Postives = 77/120 (64.17%), Query Frame = 0

Query:    1 MVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICAVIPDSADFEAAAREAGKMQEEMDKATGSGGLV 120
            MVYVERLPE  Q   GLFLP + NPR H+C+VVSVG G EGESG V  +  + PGD V+VK+P+GIG +D++F  +KFSF+RY  +C      A  EA      K  EE+++  G  GL 
Sbjct:   55 MVYVERLPEPVQTTGGLFLPGQENPRRHICRVVSVGPGVEGESGAVATSRGLAPGDYVYVKNPWGIGAKDEQFGRRKFSFLRYNEVCGTFDAGAAMEAEISGL-KKAEELEEELGGIGLA 173

[Close]

BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A7R9U985_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U985_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.840e-26
Identity = 54/92 (58.70%), Postives = 68/92 (73.91%), Query Frame = 0

Query:    1 MVYVERLPEEQQMASGLFLP--SKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICAVI 90
            MVYVERL E+QQ A G+FLP  S  N  +H+ +VVSVG GREGE+G  T N   K GD+VF+++ +GIGPRD+EF G+KFSFVR   +CA I
Sbjct:   79 MVYVERLGEDQQSAGGVFLPKVSGGNQDLHMARVVSVGDGREGENGCKTMNGNYKQGDIVFLRNAWGIGPRDEEFFGRKFSFVREQDVCAHI 170

[Close]

BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A7S1UEZ3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEZ3_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.220e-25
Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 0

Query:    1 MVYVERLPEEQQMASGLFLP--SKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICA 88
            M+YVERL E+ Q A G+FLP  S +N  +H+ +V+SVG GREGE+G  T N + K GD+VF+++ +GIGPRD+EF G+KFSFVR   +CA
Sbjct:   97 MIYVERLGEDTQSAGGVFLPTMSGSNQDLHMARVLSVGDGREGENGLRTMNGSYKEGDIVFLRNAWGIGPRDEEFRGRKFSFVREQDVCA 186

[Close]

BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A7S1XW59_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW59_9STRA)

HSP 1 Score: 103 bits (256), Expect = 5.240e-25
Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 0

Query:    1 MVYVERLPEEQQMASGLFLP--SKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICA 88
            M+YVERL E+ Q A G+FLP  S +N  +H+ +V+SVG GREGE+G  T N + K GD+VF+++ +GIGPRD+EF G+KFSFVR   +CA
Sbjct:  117 MIYVERLGEDTQSAGGVFLPTMSGSNQDLHMARVLSVGDGREGENGLRTMNGSYKEGDIVFLRNAWGIGPRDEEFRGRKFSFVREQDVCA 206

[Close]

BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A8J2SZF1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZF1_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 8.860e-24
Identity = 48/94 (51.06%), Postives = 65/94 (69.15%), Query Frame = 0

Query:    1 MVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAG----KKFSFVRYTSICAVI 90
            +VYVER+   +  A GLFL +  +P MH+ KVVSVG G +G SG V  N+ +KPGDLV+ K P+GIGP+D+EF      ++FSF+RYT I  V+
Sbjct:   49 LVYVERIKPPETSAGGLFLVAPEDPPMHLAKVVSVGAGGQGNSGLVVENAGLKPGDLVYCKHPWGIGPKDEEFGEDGQERRFSFLRYTDIAGVV 142

[Close]

BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A7S1UZ75_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZ75_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 4.690e-22
Identity = 47/98 (47.96%), Postives = 66/98 (67.35%), Query Frame = 0

Query:    1 MVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFA-GKKFSFVRYTSICAVIPDSADFE 97
            MV  ER+  + +  SGLF+P +  P++H+CKV+S+G GRE E+G + P   +K GD+V  K+P+GIGP+D+E A GKK SF+R   I AVIP     E
Sbjct:   63 MVLCERIQGKPKTESGLFVPQEDLPKLHICKVLSMGPGREEENGMIAPMPDIKVGDIVVAKNPWGIGPKDEETADGKKLSFMRALDIAAVIPGGMKIE 160

[Close]

BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: B7FX98_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX98_PHATC)

HSP 1 Score: 93.2 bits (230), Expect = 1.080e-21
Identity = 46/91 (50.55%), Postives = 65/91 (71.43%), Query Frame = 0

Query:    1 MVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFA-GKKFSFVRYTSICAVI 90
            MV VER+  +    SGLF+P +  P++H+CKV+SVG GRE E+G V+P   ++ GD+V  K+P+GIGP+D+E A GKK SF+R   I AV+
Sbjct:   57 MVLVERVQGKPPTESGLFVPQEDLPKLHLCKVLSVGPGREEENGRVSPMPEIRVGDIVIAKNPWGIGPKDEETADGKKLSFMRSQDIAAVV 147

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L438_9PHAE	3.340e-70	89.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FXF3_ECTSI	2.220e-68	86.78	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835ZNU0_9STRA	1.280e-48	69.03	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6T5R4I0_HETAK	2.750e-31	50.00	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7R9U985_9STRA	1.840e-26	58.70	Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi...	[more]
A0A7S1UEZ3_9STRA	3.220e-25	55.56	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S1XW59_9STRA	5.240e-25	55.56	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A8J2SZF1_9STRA	8.860e-24	51.06	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A7S1UZ75_9STRA	4.690e-22	47.96	Hypothetical protein n=1 Tax=Grammatophora oceanic...	[more]
B7FX98_PHATC	1.080e-21	50.55	Predicted protein n=2 Tax=Phaeodactylum tricornutu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 2..90 e-value: 3.9E-4 score: 10.3
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 2..90 e-value: 6.2E-11 score: 42.2
IPR037124	GroES chaperonin superfamily	GENE3D	2.30.33.40		coord: 1..91 e-value: 1.6E-13 score: 52.5
IPR011032	GroES-like superfamily	SUPERFAMILY	50129	GroES-like	coord: 2..90

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig8253	contig	L-elsbetiae_contig8253:1219..2841 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig8253.17256.1	mRNA_L-elsbetiae_contig8253.17256.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig8253 1189..3649 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig8253.17256.1 ID=prot_L-elsbetiae_contig8253.17256.1|Name=mRNA_L-elsbetiae_contig8253.17256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp
MVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNS
AVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICAVIPDSADFEAAA
REAGKMQEEMDKATGSGGLVF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020818	Chaperonin_GroES
IPR037124	Chaperonin_GroES_sf
IPR011032	GroES-like_sf