mRNA_L-elsbetiae_contig8253.17256.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A6H5L438_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L438_9PHAE) HSP 1 Score: 229 bits (584), Expect = 8.810e-71 Identity = 114/127 (89.76%), Postives = 120/127 (94.49%), Query Frame = 1 Query: 1 QAQRQQALYDMVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICAVIPDSADFEAAAREAGKMQEEMDKATGSG 381 QA+RQ+ALYDMVYVERLPEEQQM SGLFLP+KANPRMHVCKVVSVG GREGESGHVTPN AVKPGDLVFVKDP+GIGPRDDEFAGKKFSFVRYTSICAVIP+S DFE AAREAGK+Q EMDKA GSG Sbjct: 53 QAKRQKALYDMVYVERLPEEQQMTSGLFLPAKANPRMHVCKVVSVGNGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVIPNSQDFEDAAREAGKLQAEMDKAAGSG 179
BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: D7FXF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF3_ECTSI) HSP 1 Score: 224 bits (570), Expect = 2.700e-69 Identity = 114/131 (87.02%), Postives = 122/131 (93.13%), Query Frame = 1 Query: 1 QAQRQQALYDMVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICAVIPDSADFEAAAREAGKMQEEMDKATGSGGLVF 393 QAQRQ+ALYDMVYVERLPEEQQM SGLFLP+KANPRMHVCKVVS+G GREGESG+VTPN AVK GDLVFVKDP+GIGPRDDEFAGKKFSFVRYTSICAVIP+S DFE AAREAGK+Q E+DKA GSG LVF Sbjct: 10 QAQRQKALYDMVYVERLPEEQQMTSGLFLPAKANPRMHVCKVVSIGNGREGESGNVTPNDAVKQGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVIPNSEDFENAAREAGKLQAEIDKAAGSG-LVF 139
BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A835ZNU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNU0_9STRA) HSP 1 Score: 171 bits (434), Expect = 5.710e-49 Identity = 86/123 (69.92%), Postives = 101/123 (82.11%), Query Frame = 1 Query: 10 RQQALYDMVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICAVIPDSADFEAAAREAGKMQEEMDKATGS 378 RQQALYDMVYVERLPE QQM SGLFLP K NPRMHVCK+VS+G GREGESG + N+ +KPGDLV+VKDP+GIGP+DDEF+ KFSFVRY +ICAVIP+S +EA+AR AG+ M +A S Sbjct: 11 RQQALYDMVYVERLPEAQQMTSGLFLPGKENPRMHVCKIVSLGQGREGESGTLVENAGLKPGDLVYVKDPWGIGPKDDEFSNHKFSFVRYQNICAVIPNSDAYEASARAAGEEALAMAQAGQS 133
BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A6T5R4I0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5R4I0_HETAK) HSP 1 Score: 123 bits (308), Expect = 8.770e-30 Identity = 63/126 (50.00%), Postives = 82/126 (65.08%), Query Frame = 1 Query: 10 RQQALYDMVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICAVIPDSADFEAAAREAGKMQEEMDKATGSGGL 387 +Q+ LY MVYVERLPE Q GLFLP + NPR H+C+VVSVG G EGESG V + + PGD V+VK+P+GIG +D++F +KFSF+RY +C A EA K EE+++ G GL Sbjct: 48 KQECLYGMVYVERLPEPVQTTGGLFLPGQENPRRHICRVVSVGPGVEGESGAVATSRGLAPGDYVYVKNPWGIGAKDEQFGRRKFSFLRYNEVCGTFDAGAAMEAEISGL-KKAEELEEELGGIGL 172
BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A7R9U985_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U985_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.450e-26 Identity = 60/102 (58.82%), Postives = 76/102 (74.51%), Query Frame = 1 Query: 1 QAQRQQALYDMVYVERLPEEQQMASGLFLP--SKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICAVI 300 +A +Q ALYDMVYVERL E+QQ A G+FLP S N +H+ +VVSVG GREGE+G T N K GD+VF+++ +GIGPRD+EF G+KFSFVR +CA I Sbjct: 69 EASKQIALYDMVYVERLGEDQQSAGGVFLPKVSGGNQDLHMARVVSVGDGREGENGCKTMNGNYKQGDIVFLRNAWGIGPRDEEFFGRKFSFVREQDVCAHI 170
BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A7S1UEZ3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEZ3_9STRA) HSP 1 Score: 110 bits (275), Expect = 5.390e-25 Identity = 55/96 (57.29%), Postives = 73/96 (76.04%), Query Frame = 1 Query: 13 QQALYDMVYVERLPEEQQMASGLFLP--SKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICA 294 Q ALYDM+YVERL E+ Q A G+FLP S +N +H+ +V+SVG GREGE+G T N + K GD+VF+++ +GIGPRD+EF G+KFSFVR +CA Sbjct: 91 QNALYDMIYVERLGEDTQSAGGVFLPTMSGSNQDLHMARVLSVGDGREGENGLRTMNGSYKEGDIVFLRNAWGIGPRDEEFRGRKFSFVREQDVCA 186
BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A8J2SZF1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZF1_9STRA) HSP 1 Score: 108 bits (271), Expect = 5.750e-25 Identity = 55/101 (54.46%), Postives = 72/101 (71.29%), Query Frame = 1 Query: 10 RQQALYDMVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAG----KKFSFVRYTSICAVI 300 RQQALYD+VYVER+ + A GLFL + +P MH+ KVVSVG G +G SG V N+ +KPGDLV+ K P+GIGP+D+EF ++FSF+RYT I V+ Sbjct: 42 RQQALYDLVYVERIKPPETSAGGLFLVAPEDPPMHLAKVVSVGAGGQGNSGLVVENAGLKPGDLVYCKHPWGIGPKDEEFGEDGQERRFSFLRYTDIAGVV 142
BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A7S1XW59_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW59_9STRA) HSP 1 Score: 110 bits (275), Expect = 8.980e-25 Identity = 55/96 (57.29%), Postives = 73/96 (76.04%), Query Frame = 1 Query: 13 QQALYDMVYVERLPEEQQMASGLFLP--SKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFAGKKFSFVRYTSICA 294 Q ALYDM+YVERL E+ Q A G+FLP S +N +H+ +V+SVG GREGE+G T N + K GD+VF+++ +GIGPRD+EF G+KFSFVR +CA Sbjct: 111 QNALYDMIYVERLGEDTQSAGGVFLPTMSGSNQDLHMARVLSVGDGREGENGLRTMNGSYKEGDIVFLRNAWGIGPRDEEFRGRKFSFVREQDVCA 206
BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: A0A7S1UZ75_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZ75_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.280e-20 Identity = 49/100 (49.00%), Postives = 68/100 (68.00%), Query Frame = 1 Query: 25 YDMVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFA-GKKFSFVRYTSICAVIPDSADFE 321 YDMV ER+ + + SGLF+P + P++H+CKV+S+G GRE E+G + P +K GD+V K+P+GIGP+D+E A GKK SF+R I AVIP E Sbjct: 61 YDMVLCERIQGKPKTESGLFVPQEDLPKLHICKVLSMGPGREEENGMIAPMPDIKVGDIVVAKNPWGIGPKDEETADGKKLSFMRALDIAAVIPGGMKIE 160
BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Match: B7FX98_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX98_PHATC) HSP 1 Score: 97.1 bits (240), Expect = 1.980e-20 Identity = 49/96 (51.04%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 16 QALYDMVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSAVKPGDLVFVKDPFGIGPRDDEFA-GKKFSFVRYTSICAVI 300 Q YDMV VER+ + SGLF+P + P++H+CKV+SVG GRE E+G V+P ++ GD+V K+P+GIGP+D+E A GKK SF+R I AV+ Sbjct: 52 QCHYDMVLVERVQGKPPTESGLFVPQEDLPKLHLCKVLSVGPGREEENGRVSPMPEIRVGDIVIAKNPWGIGPKDEETADGKKLSFMRSQDIAAVV 147 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8253.17256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8253.17256.1 >prot_L-elsbetiae_contig8253.17256.1 ID=prot_L-elsbetiae_contig8253.17256.1|Name=mRNA_L-elsbetiae_contig8253.17256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp MVYVERLPEEQQMASGLFLPSKANPRMHVCKVVSVGGGREGESGHVTPNSback to top mRNA from alignment at L-elsbetiae_contig8253:1189..3649+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8253.17256.1 ID=mRNA_L-elsbetiae_contig8253.17256.1|Name=mRNA_L-elsbetiae_contig8253.17256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2461bp|location=Sequence derived from alignment at L-elsbetiae_contig8253:1189..3649+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8253:1189..3649+ >mRNA_L-elsbetiae_contig8253.17256.1 ID=mRNA_L-elsbetiae_contig8253.17256.1|Name=mRNA_L-elsbetiae_contig8253.17256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=732bp|location=Sequence derived from alignment at L-elsbetiae_contig8253:1189..3649+ (Laminarionema elsbetiae ELsaHSoW15)back to top |