prot_L-elsbetiae_contig8245.17251.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8245.17251.1
Unique Nameprot_L-elsbetiae_contig8245.17251.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length49
Homology
BLAST of mRNA_L-elsbetiae_contig8245.17251.1 vs. uniprot
Match: D7FY49_ECTSI (Similar to collagen, partial n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY49_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 7.090e-13
Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    2 PQAVADAAREAGTVLFAVGVGPGPDQGTLMAIAGDEANIFDVDNFNEL 49
            PQ  ADAAR  GT+L+AVGVG GP Q  L+AI GDEAN+FDVDNF EL
Sbjct:  186 PQDEADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEEL 233          
BLAST of mRNA_L-elsbetiae_contig8245.17251.1 vs. uniprot
Match: A0A6H5JRK3_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK3_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 8.440e-13
Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    2 PQAVADAAREAGTVLFAVGVGPGPDQGTLMAIAGDEANIFDVDNFNEL 49
            PQ  ADAAR  GT+L+AVGVG GP Q  L+AI GDEAN+FDVDNF EL
Sbjct:  203 PQDEADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEEL 250          
BLAST of mRNA_L-elsbetiae_contig8245.17251.1 vs. uniprot
Match: D7FHN6_ECTSI (Glycin-rich protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN6_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 8.450e-13
Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    2 PQAVADAAREAGTVLFAVGVGPGPDQGTLMAIAGDEANIFDVDNFNEL 49
            PQ  ADAAR  GT+L+AVGVG GP Q  L+AI GDEAN+FDVDNF EL
Sbjct:  193 PQDEADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEEL 240          
BLAST of mRNA_L-elsbetiae_contig8245.17251.1 vs. uniprot
Match: A0A6H5JR61_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR61_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.350e-11
Identity = 33/49 (67.35%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    1 SPQAVADAAREAGTVLFAVGVGPGPDQGTLMAIAGDEANIFDVDNFNEL 49
            SPQ  ADAAR  GT+++AVGVG  P   TL+AI GDEAN+FDVDNF EL
Sbjct:  222 SPQDEADAARAEGTIMYAVGVGSVPTAETLLAIGGDEANVFDVDNFEEL 270          
BLAST of mRNA_L-elsbetiae_contig8245.17251.1 vs. uniprot
Match: D8LLU2_ECTSI (Similar to integrin alpha Hr1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU2_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 2.340e-11
Identity = 31/49 (63.27%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 SPQAVADAAREAGTVLFAVGVGPGPDQGTLMAIAGDEANIFDVDNFNEL 49
            SP+A ADAAR+ GT+++AVGVG GP Q  L+ I G+EAN+FDVD F+EL
Sbjct:  172 SPKAEADAARDEGTIVYAVGVGTGPTQEILLDIGGEEANVFDVDGFDEL 220          
BLAST of mRNA_L-elsbetiae_contig8245.17251.1 vs. uniprot
Match: D7G513_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G513_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 5.330e-9
Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    2 PQAVADAAREAGTVLFAVGVGPGPDQGTLMAIAGDEANIFDVDNFNEL 49
            PQ  ADAAR+ GT+++AVGVGP   + TL++I GD  N+FD  NF EL
Sbjct:  185 PQIEADAARDEGTIVYAVGVGPDVSEATLLSIGGDLTNVFDASNFTEL 232          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8245.17251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FY49_ECTSI7.090e-1370.83Similar to collagen, partial n=2 Tax=Ectocarpus si... [more]
A0A6H5JRK3_9PHAE8.440e-1370.83VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FHN6_ECTSI8.450e-1370.83Glycin-rich protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5JR61_9PHAE1.350e-1167.35VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LLU2_ECTSI2.340e-1163.27Similar to integrin alpha Hr1-like n=1 Tax=Ectocar... [more]
D7G513_ECTSI5.330e-956.25VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 1..49
e-value: 2.7E-5
score: 24.5
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410coord: 1..49
e-value: 6.1E-9
score: 38.0
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 2..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8245contigL-elsbetiae_contig8245:503..649 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8245.17251.1mRNA_L-elsbetiae_contig8245.17251.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8245 503..649 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8245.17251.1 ID=prot_L-elsbetiae_contig8245.17251.1|Name=mRNA_L-elsbetiae_contig8245.17251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=49bp
SPQAVADAAREAGTVLFAVGVGPGPDQGTLMAIAGDEANIFDVDNFNEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf