prot_L-elsbetiae_contig8243.17249.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8243.17249.1
Unique Nameprot_L-elsbetiae_contig8243.17249.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length159
Homology
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: D7FUV3_ECTSI (Structural maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV3_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 3.110e-66
Identity = 116/152 (76.32%), Postives = 131/152 (86.18%), Query Frame = 0
Query:   10 QLAGSVSGAA--EKSGFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 159
            +L GS +GA   E SG+K GSIVSLK+KNFLVYKDAKA FGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVK+DASVTVEL++  G NLH+TRTFSR++N S W IN  S + ++V+  I+ LGIQVDNLCTMLPQ
Sbjct:   16 RLTGSGTGAIGREVSGWKKGSIVSLKMKNFLVYKDAKAVFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKEDASVTVELYMPDGNNLHVTRTFSRKNNSSNWHINGRSHSTKEVENKIRALGIQVDNLCTMLPQ 167          
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A6H5JJB3_9PHAE (Structural maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJB3_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 3.050e-61
Identity = 109/140 (77.86%), Postives = 124/140 (88.57%), Query Frame = 0
Query:   20 EKSGFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 159
            E SG+K GSIVSLK+KNFLVYKDAKA FGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVK+DASVTVEL++  G NLH+TRTFSR++N S W IN  S + ++V+  ++ LGIQV+NLCTMLPQ
Sbjct:   28 EVSGWKKGSIVSLKMKNFLVYKDAKAVFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKEDASVTVELYMPDGSNLHVTRTFSRKNNSSNWHINGRSHSTKEVENMVRALGIQVNNLCTMLPQ 167          
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A177WTY8_BATDL (Structural maintenance of chromosomes protein 5 n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WTY8_BATDL)

HSP 1 Score: 138 bits (348), Expect = 6.480e-35
Identity = 79/133 (59.40%), Postives = 96/133 (72.18%), Query Frame = 0
Query:   27 GSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 159
            GSIV +KL NFL Y   + + GP LNMVVGPNG+GKST+VCAIALGL G P VLGRA  L  FV HG ++ A V +EL V+ G+ L ITRTF R SN+S+W+IN  S  E+++K  I+ L IQVDNLC  LPQ
Sbjct:  686 GSIVRIKLTNFLTYSAVEFYPGPNLNMVVGPNGTGKSTVVCAIALGLCGRPDVLGRARELQDFVKHG-ENKAIVEIELKVT-GKKLVITRTFERGSNQSSWKINGLSAKEKEIKAEIEALAIQVDNLCQFLPQ 816          
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A8H7UZD2_9FUNG (Structural maintenance of chromosomes protein 5 n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UZD2_9FUNG)

HSP 1 Score: 129 bits (324), Expect = 6.810e-34
Identity = 70/142 (49.30%), Postives = 100/142 (70.42%), Query Frame = 0
Query:   19 AEKSGFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSR-QSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 159
            A  + F +GSIV + L NF+ Y   +   GP++NM++GPNG+GKST+VCAIALGLGG+P +LGRA ++S FV  G +D+A++++EL     +N+ I RTF +   N +TWRIN  S ++R+V   ++ L IQVDNLC  LPQ
Sbjct:    8 AYSNSFVEGSIVKITLTNFVTYDYCEILPGPQMNMIIGPNGTGKSTIVCAIALGLGGTPALLGRAKSISEFVKTG-EDEATISIELKKVGTRNVIIQRTFKKADGNINTWRINGKSTSQREVLSIVRNLNIQVDNLCQFLPQ 148          
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A8H7BNY9_9FUNG (Structural maintenance of chromosomes protein 5 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BNY9_9FUNG)

HSP 1 Score: 135 bits (340), Expect = 7.470e-34
Identity = 67/137 (48.91%), Postives = 99/137 (72.26%), Query Frame = 0
Query:   23 GFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 159
            G+ +GSIV + L+NF+ Y   +   GP+LNM++GPNG+GKST+VCAIALGLGG+P +LGRA N++ FV  G +D+A + +EL  + G+N+ I R   + +N ++W++N  S T+++V   I +L IQVDNLC  LPQ
Sbjct:   48 GYVEGSIVKITLRNFVTYDYCEFTPGPQLNMIIGPNGTGKSTIVCAIALGLGGAPSLLGRAKNIAEFVQTG-EDEAMIKIELKKTSGRNVIIQRNIQKTNNSTSWKLNGRSTTQKEVLSVIARLNIQVDNLCQFLPQ 183          
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A367IZE4_RHIAZ (Structural maintenance of chromosomes protein 5 (Fragment) n=4 Tax=Rhizopus TaxID=4842 RepID=A0A367IZE4_RHIAZ)

HSP 1 Score: 134 bits (338), Expect = 1.370e-33
Identity = 67/140 (47.86%), Postives = 98/140 (70.00%), Query Frame = 0
Query:   20 EKSGFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 159
            E+ GF +GSIV + L NF+ Y   +    P++NM++GPNG+GKST+VCAIALGLGG+P +LGRA N+  FV  G +D+A++++EL   + +N+ I R+F + SN + W++N  S T ++V   +  L IQVDNLC  LPQ
Sbjct:   61 EEDGFVEGSIVKITLTNFVTYDYCEVFPDPQMNMIIGPNGTGKSTIVCAIALGLGGTPALLGRAKNIQEFVKTG-QDEATISIELKKVNDRNIVIQRSFKKSSNSTVWKVNGKSTTYKEVLNIVHSLNIQVDNLCQFLPQ 199          
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: L8H2P4_ACACA (Structural maintenance of chromosomes protein 5 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H2P4_ACACA)

HSP 1 Score: 134 bits (336), Expect = 2.590e-33
Identity = 70/147 (47.62%), Postives = 101/147 (68.71%), Query Frame = 0
Query:   13 GSVSGAAEKSGFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 159
            G+  G +   G+K GSIV +++ NF+ Y D +   GPRLN+V+GPNGSGKST+VC +ALGLGG+P +LGRA  +  F+ HG KD A++ +EL  + G+N+ + RT   Q NKS W++N     + +V + ++KL +QVDNLC  LPQ
Sbjct:  105 GNNKGGSNAEGYKRGSIVRIRMINFVTYTDCEVRPGPRLNVVMGPNGSGKSTIVCGLALGLGGAPTILGRAKEVREFIKHG-KDKATIEIELCNTKGRNVVVQRTIL-QDNKSQWKLNGHGVGKARVMDVMKKLNVQVDNLCQFLPQ 249          
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A1X2IAJ7_9FUNG (Structural maintenance of chromosomes protein 5 n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IAJ7_9FUNG)

HSP 1 Score: 134 bits (336), Expect = 2.590e-33
Identity = 70/137 (51.09%), Postives = 96/137 (70.07%), Query Frame = 0
Query:   23 GFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 159
            G+ +GSIV + L+NF+ Y   +   GP+LNM++GPNG+GKST+VCA+ALGLGGSP +LGRA N+S FV  G +++AS+ +EL    GQN+ I R  ++ +N S W++N  + T R V   I  L IQVDNLC  LPQ
Sbjct:   80 GYVEGSIVKMVLRNFVTYDYCEFTPGPQLNMIIGPNGTGKSTIVCAVALGLGGSPLLLGRARNISDFVKTG-EEEASIQIELKKVDGQNVVIQRKINKSNNSSGWKLNGRTSTSRDVLSVIASLNIQVDNLCQFLPQ 215          
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A835YL14_9STRA (Structural maintenance of chromosomes protein 5 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL14_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.580e-32
Identity = 67/137 (48.91%), Postives = 91/137 (66.42%), Query Frame = 0
Query:   24 FKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSH-GQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 159
            F  G+I  + + NFL Y D     GP+LN+V+GPNG+GKS++VCA+ LGL G+PK LGR++NL+ F+MH  +  A V VEL V   G+ +   R+F R    S W+++  +  E+ VKE I  LGIQVDNLCT LPQ
Sbjct:    1 FHTGAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHE-QQHAWVEVELEVHEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQ 136          
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A6A6T6Y5_9PLEO (Structural maintenance of chromosomes protein 5 n=1 Tax=Lophiostoma macrostomum CBS 122681 TaxID=1314788 RepID=A0A6A6T6Y5_9PLEO)

HSP 1 Score: 131 bits (329), Expect = 2.260e-32
Identity = 72/137 (52.55%), Postives = 94/137 (68.61%), Query Frame = 0
Query:   25 KDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVS--HGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 159
            K GSIV +KLKNF+ Y  A+ H GP LNMV+GPNG+GKSTLVCAI LGLG  PK LGRA ++  FV HG  ++A + +EL     HG+N  I R  ++Q NKS + IN  S T+++V +  ++  IQ+DNLC  LPQ
Sbjct:   74 KPGSIVRVKLKNFVTYTAAEFHPGPSLNMVIGPNGTGKSTLVCAICLGLGWDPKNLGRAKDIGEFVKHG-SNEAEIAIELAAGPQHGENPVIYRKITKQGNKSKFEINGQSATQKKVVKLAKEFSIQIDNLCQFLPQ 209          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUV3_ECTSI3.110e-6676.32Structural maintenance of chromosomes protein 5 n=... [more]
A0A6H5JJB3_9PHAE3.050e-6177.86Structural maintenance of chromosomes protein 5 n=... [more]
A0A177WTY8_BATDL6.480e-3559.40Structural maintenance of chromosomes protein 5 n=... [more]
A0A8H7UZD2_9FUNG6.810e-3449.30Structural maintenance of chromosomes protein 5 n=... [more]
A0A8H7BNY9_9FUNG7.470e-3448.91Structural maintenance of chromosomes protein 5 n=... [more]
A0A367IZE4_RHIAZ1.370e-3347.86Structural maintenance of chromosomes protein 5 (F... [more]
L8H2P4_ACACA2.590e-3347.62Structural maintenance of chromosomes protein 5 n=... [more]
A0A1X2IAJ7_9FUNG2.590e-3351.09Structural maintenance of chromosomes protein 5 n=... [more]
A0A835YL14_9STRA1.580e-3248.91Structural maintenance of chromosomes protein 5 (F... [more]
A0A6A6T6Y5_9PLEO2.260e-3252.55Structural maintenance of chromosomes protein 5 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038729Rad50/SbcC-type AAA domainPFAMPF13476AAA_23coord: 31..155
e-value: 6.1E-18
score: 66.0
NoneNo IPR availableGENE3D3.40.50.300coord: 29..159
e-value: 1.5E-28
score: 102.2
IPR027131Structural maintenance of chromosomes protein 5PANTHERPTHR45916FAMILY NOT NAMEDcoord: 16..159
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 29..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8243contigL-elsbetiae_contig8243:5234..8105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8243.17249.1mRNA_L-elsbetiae_contig8243.17249.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8243 5234..8105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8243.17249.1 ID=prot_L-elsbetiae_contig8243.17249.1|Name=mRNA_L-elsbetiae_contig8243.17249.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=159bp
NSTTASSTAQLAGSVSGAAEKSGFKDGSIVSLKLKNFLVYKDAKAHFGPR
LNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASV
TVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQV
DNLCTMLPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038729Rad50/SbcC_AAA
IPR027131SMC5
IPR027417P-loop_NTPase