mRNA_L-elsbetiae_contig8243.17249.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: D7FUV3_ECTSI (Structural maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV3_ECTSI) HSP 1 Score: 217 bits (552), Expect = 3.110e-66 Identity = 116/152 (76.32%), Postives = 131/152 (86.18%), Query Frame = 1 Query: 28 QLAGSVSGAA--EKSGFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 477 +L GS +GA E SG+K GSIVSLK+KNFLVYKDAKA FGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVK+DASVTVEL++ G NLH+TRTFSR++N S W IN S + ++V+ I+ LGIQVDNLCTMLPQ Sbjct: 16 RLTGSGTGAIGREVSGWKKGSIVSLKMKNFLVYKDAKAVFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKEDASVTVELYMPDGNNLHVTRTFSRKNNSSNWHINGRSHSTKEVENKIRALGIQVDNLCTMLPQ 167
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A6H5JJB3_9PHAE (Structural maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJB3_9PHAE) HSP 1 Score: 213 bits (543), Expect = 3.050e-61 Identity = 109/140 (77.86%), Postives = 124/140 (88.57%), Query Frame = 1 Query: 58 EKSGFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 477 E SG+K GSIVSLK+KNFLVYKDAKA FGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVK+DASVTVEL++ G NLH+TRTFSR++N S W IN S + ++V+ ++ LGIQV+NLCTMLPQ Sbjct: 28 EVSGWKKGSIVSLKMKNFLVYKDAKAVFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKEDASVTVELYMPDGSNLHVTRTFSRKNNSSNWHINGRSHSTKEVENMVRALGIQVNNLCTMLPQ 167
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A177WTY8_BATDL (Structural maintenance of chromosomes protein 5 n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WTY8_BATDL) HSP 1 Score: 138 bits (348), Expect = 6.480e-35 Identity = 79/133 (59.40%), Postives = 96/133 (72.18%), Query Frame = 1 Query: 79 GSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 477 GSIV +KL NFL Y + + GP LNMVVGPNG+GKST+VCAIALGL G P VLGRA L FV HG ++ A V +EL V+ G+ L ITRTF R SN+S+W+IN S E+++K I+ L IQVDNLC LPQ Sbjct: 686 GSIVRIKLTNFLTYSAVEFYPGPNLNMVVGPNGTGKSTVVCAIALGLCGRPDVLGRARELQDFVKHG-ENKAIVEIELKVT-GKKLVITRTFERGSNQSSWKINGLSAKEKEIKAEIEALAIQVDNLCQFLPQ 816
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A8H7UZD2_9FUNG (Structural maintenance of chromosomes protein 5 n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UZD2_9FUNG) HSP 1 Score: 129 bits (324), Expect = 6.810e-34 Identity = 70/142 (49.30%), Postives = 100/142 (70.42%), Query Frame = 1 Query: 55 AEKSGFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSR-QSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 477 A + F +GSIV + L NF+ Y + GP++NM++GPNG+GKST+VCAIALGLGG+P +LGRA ++S FV G +D+A++++EL +N+ I RTF + N +TWRIN S ++R+V ++ L IQVDNLC LPQ Sbjct: 8 AYSNSFVEGSIVKITLTNFVTYDYCEILPGPQMNMIIGPNGTGKSTIVCAIALGLGGTPALLGRAKSISEFVKTG-EDEATISIELKKVGTRNVIIQRTFKKADGNINTWRINGKSTSQREVLSIVRNLNIQVDNLCQFLPQ 148
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A8H7BNY9_9FUNG (Structural maintenance of chromosomes protein 5 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BNY9_9FUNG) HSP 1 Score: 135 bits (340), Expect = 7.470e-34 Identity = 67/137 (48.91%), Postives = 99/137 (72.26%), Query Frame = 1 Query: 67 GFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 477 G+ +GSIV + L+NF+ Y + GP+LNM++GPNG+GKST+VCAIALGLGG+P +LGRA N++ FV G +D+A + +EL + G+N+ I R + +N ++W++N S T+++V I +L IQVDNLC LPQ Sbjct: 48 GYVEGSIVKITLRNFVTYDYCEFTPGPQLNMIIGPNGTGKSTIVCAIALGLGGAPSLLGRAKNIAEFVQTG-EDEAMIKIELKKTSGRNVIIQRNIQKTNNSTSWKLNGRSTTQKEVLSVIARLNIQVDNLCQFLPQ 183
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A367IZE4_RHIAZ (Structural maintenance of chromosomes protein 5 (Fragment) n=4 Tax=Rhizopus TaxID=4842 RepID=A0A367IZE4_RHIAZ) HSP 1 Score: 134 bits (338), Expect = 1.370e-33 Identity = 67/140 (47.86%), Postives = 98/140 (70.00%), Query Frame = 1 Query: 58 EKSGFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 477 E+ GF +GSIV + L NF+ Y + P++NM++GPNG+GKST+VCAIALGLGG+P +LGRA N+ FV G +D+A++++EL + +N+ I R+F + SN + W++N S T ++V + L IQVDNLC LPQ Sbjct: 61 EEDGFVEGSIVKITLTNFVTYDYCEVFPDPQMNMIIGPNGTGKSTIVCAIALGLGGTPALLGRAKNIQEFVKTG-QDEATISIELKKVNDRNIVIQRSFKKSSNSTVWKVNGKSTTYKEVLNIVHSLNIQVDNLCQFLPQ 199
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: L8H2P4_ACACA (Structural maintenance of chromosomes protein 5 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H2P4_ACACA) HSP 1 Score: 134 bits (336), Expect = 2.590e-33 Identity = 70/147 (47.62%), Postives = 101/147 (68.71%), Query Frame = 1 Query: 37 GSVSGAAEKSGFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 477 G+ G + G+K GSIV +++ NF+ Y D + GPRLN+V+GPNGSGKST+VC +ALGLGG+P +LGRA + F+ HG KD A++ +EL + G+N+ + RT Q NKS W++N + +V + ++KL +QVDNLC LPQ Sbjct: 105 GNNKGGSNAEGYKRGSIVRIRMINFVTYTDCEVRPGPRLNVVMGPNGSGKSTIVCGLALGLGGAPTILGRAKEVREFIKHG-KDKATIEIELCNTKGRNVVVQRTIL-QDNKSQWKLNGHGVGKARVMDVMKKLNVQVDNLCQFLPQ 249
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A1X2IAJ7_9FUNG (Structural maintenance of chromosomes protein 5 n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IAJ7_9FUNG) HSP 1 Score: 134 bits (336), Expect = 2.590e-33 Identity = 70/137 (51.09%), Postives = 96/137 (70.07%), Query Frame = 1 Query: 67 GFKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSHGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 477 G+ +GSIV + L+NF+ Y + GP+LNM++GPNG+GKST+VCA+ALGLGGSP +LGRA N+S FV G +++AS+ +EL GQN+ I R ++ +N S W++N + T R V I L IQVDNLC LPQ Sbjct: 80 GYVEGSIVKMVLRNFVTYDYCEFTPGPQLNMIIGPNGTGKSTIVCAVALGLGGSPLLLGRARNISDFVKTG-EEEASIQIELKKVDGQNVVIQRKINKSNNSSGWKLNGRTSTSRDVLSVIASLNIQVDNLCQFLPQ 215
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A835YL14_9STRA (Structural maintenance of chromosomes protein 5 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL14_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.580e-32 Identity = 67/137 (48.91%), Postives = 91/137 (66.42%), Query Frame = 1 Query: 70 FKDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVSH-GQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 477 F G+I + + NFL Y D GP+LN+V+GPNG+GKS++VCA+ LGL G+PK LGR++NL+ F+MH + A V VEL V G+ + R+F R S W+++ + E+ VKE I LGIQVDNLCT LPQ Sbjct: 1 FHTGAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHE-QQHAWVEVELEVHEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQ 136
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Match: A0A6A6T6Y5_9PLEO (Structural maintenance of chromosomes protein 5 n=1 Tax=Lophiostoma macrostomum CBS 122681 TaxID=1314788 RepID=A0A6A6T6Y5_9PLEO) HSP 1 Score: 131 bits (329), Expect = 2.260e-32 Identity = 72/137 (52.55%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 73 KDGSIVSLKLKNFLVYKDAKAHFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKDDASVTVELHVS--HGQNLHITRTFSRQSNKSTWRINSSSRTERQVKETIQKLGIQVDNLCTMLPQ 477 K GSIV +KLKNF+ Y A+ H GP LNMV+GPNG+GKSTLVCAI LGLG PK LGRA ++ FV HG ++A + +EL HG+N I R ++Q NKS + IN S T+++V + ++ IQ+DNLC LPQ Sbjct: 74 KPGSIVRVKLKNFVTYTAAEFHPGPSLNMVIGPNGTGKSTLVCAICLGLGWDPKNLGRAKDIGEFVKHG-SNEAEIAIELAAGPQHGENPVIYRKITKQGNKSKFEINGQSATQKKVVKLAKEFSIQIDNLCQFLPQ 209 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8243.17249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8243.17249.1 >prot_L-elsbetiae_contig8243.17249.1 ID=prot_L-elsbetiae_contig8243.17249.1|Name=mRNA_L-elsbetiae_contig8243.17249.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=159bp NSTTASSTAQLAGSVSGAAEKSGFKDGSIVSLKLKNFLVYKDAKAHFGPRback to top mRNA from alignment at L-elsbetiae_contig8243:5234..8105+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8243.17249.1 ID=mRNA_L-elsbetiae_contig8243.17249.1|Name=mRNA_L-elsbetiae_contig8243.17249.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2872bp|location=Sequence derived from alignment at L-elsbetiae_contig8243:5234..8105+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8243:5234..8105+ >mRNA_L-elsbetiae_contig8243.17249.1 ID=mRNA_L-elsbetiae_contig8243.17249.1|Name=mRNA_L-elsbetiae_contig8243.17249.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=954bp|location=Sequence derived from alignment at L-elsbetiae_contig8243:5234..8105+ (Laminarionema elsbetiae ELsaHSoW15)back to top |