prot_L-elsbetiae_contig824.17245.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig824.17245.1
Unique Nameprot_L-elsbetiae_contig824.17245.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length274
Homology
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BLAST of mRNA_L-elsbetiae_contig824.17245.1 vs. uniprot
Match: D8LCJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ7_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.340e-14
Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 0 
Query:   26 KKHRCWQFHLCGISNGETTVAHARSLESFRSIYTAAKRLTINPV----PCCR---------VETKPSPSHVPDNTKGGC--VVVEVQFSGPQSAERPAVLLNRLFQAERVAVYPVALRRGRK 132
            +K RCWQFH+ G+S  +T      +L +F   YTA   LT+ P     P  R          + K +     +++  G   VVVEV+FSGPQ A+RPA+LL  L + E VA +PV+LRRGR+
Sbjct:   22 RKQRCWQFHVSGVSISDTKAQQEAALATFTDTYTATTWLTVRPATPRGPVGRRKKYGTLDETDRKTTEKGDSESSSSGTRSVVVEVRFSGPQPADRPALLLRSLLKGESVAAHPVSLRRGRQ 143
[Close]
BLAST of mRNA_L-elsbetiae_contig824.17245.1 vs. uniprot
Match: A0A6H5JPU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU4_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 7.560e-7
Identity = 41/98 (41.84%), Postives = 54/98 (55.10%), Query Frame = 0 
Query:   50 SLESFRSIYTAAKRLTINPVPCCRVETKPSPSHVPDNT------KGGC---------VVVEVQFSGPQSAERPAVLLNRLFQAERVAVYPVALRRGRK 132
            +L +F   YTA  RLT+ P        + + S + D T      KG           VVVEV+FSGPQ A+RPA+LL  L + E V V+PV+LRRGR+
Sbjct:    7 ALATFTDTYTATTRLTVRPASPRGPVGRRNKSGLIDETDSKTTTKGDSESNSSDTRSVVVEVRFSGPQPADRPALLLRSLLKGESVVVHPVSLRRGRQ 104
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig824.17245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCJ7_ECTSI1.340e-1440.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPU4_9PHAE7.560e-741.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..273
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.618

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig824contigL-elsbetiae_contig824:21032..24886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig824.17245.1mRNA_L-elsbetiae_contig824.17245.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig824 20942..24889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig824.17245.1 ID=prot_L-elsbetiae_contig824.17245.1|Name=mRNA_L-elsbetiae_contig824.17245.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=274bp
MCFCAYLSLSVPMTLPVAAASDPSKKKHRCWQFHLCGISNGETTVAHARS
LESFRSIYTAAKRLTINPVPCCRVETKPSPSHVPDNTKGGCVVVEVQFSG
PQSAERPAVLLNRLFQAERVAVYPVALRRGRKRSLGVIKEVPGDKTNSCA
STEVHGNSGDPIEASPAIDTTSGTNTSSDTMNYWRHAKRRSASGENLPSP
ASPRMEEEEEEEEEEDAEGGDIISDSVGNDNDDDNDDDIDYFWSFEEEDL
TAVGASCSNGIIGRSLLCGAWSR*
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