prot_L-elsbetiae_contig8234.17239.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8234.17239.1
Unique Nameprot_L-elsbetiae_contig8234.17239.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length137
Homology
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BLAST of mRNA_L-elsbetiae_contig8234.17239.1 vs. uniprot
Match: D8LPW2_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW2_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 2.990e-13
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 0 
Query:    4 LHCRTRNPLDPQKKYDEADPLFVRAIKIQEATLGPDHPELATSLNNRA 51
            +H R R  L+ Q KYDE DPL++RAI+I E TLGPDHP LATSLNNRA
Sbjct:   39 VHGRVRGLLESQGKYDEGDPLYLRAIEIGEKTLGPDHPALATSLNNRA 86
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BLAST of mRNA_L-elsbetiae_contig8234.17239.1 vs. uniprot
Match: D8LLM3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM3_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 4.440e-9
Identity = 26/39 (66.67%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:   20 EADPLFVRAIKIQEATLGPDHPELATSLNNRAILLKAQG 58
            EADPL++RAI++ E  LGPDHP+LAT LNN+A+LL+ QG
Sbjct:   12 EADPLYLRAIEVGEKKLGPDHPDLATWLNNQAVLLRKQG 50
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BLAST of mRNA_L-elsbetiae_contig8234.17239.1 vs. uniprot
Match: A0A6H5KSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 5.860e-9
Identity = 29/46 (63.04%), Postives = 38/46 (82.61%), Query Frame = 0 
Query:   12 LDPQKKYDEADPLFVRAIKIQEATLGPDHPELATSLNNRAILLKAQ 57
            L+ Q K+ EADPL++RAI++ E  LG DHP+LATS+NNRA LL+AQ
Sbjct:  337 LEKQGKHAEADPLYLRAIEVAEKMLGRDHPDLATSINNRAELLRAQ 382
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BLAST of mRNA_L-elsbetiae_contig8234.17239.1 vs. uniprot
Match: A0A6H5JUC1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC1_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 6.260e-9
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:   18 YDEADPLFVRAIKIQEATLGPDHPELATSLNNRAILLKAQG 58
            +   DPLF+RAI+I E TLGPDHP+LAT LNNRA LL+AQG
Sbjct:  254 FTSQDPLFLRAIEIGEKTLGPDHPDLATRLNNRAELLRAQG 294
[Close]
BLAST of mRNA_L-elsbetiae_contig8234.17239.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 9.300e-9
Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0 
Query:   12 LDPQKKYDEADPLFVRAIKIQEATLGPDHPELATSLNNRAILLKAQ 57
            L+   KY EADPL++RAI+I E TLGPDHP LAT LNNRA LL +Q
Sbjct:  609 LELMGKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGLLGSQ 654
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BLAST of mRNA_L-elsbetiae_contig8234.17239.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 57.4 bits (137), Expect = 2.190e-8
Identity = 24/39 (61.54%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:   13 DPQKKYDEADPLFVRAIKIQEATLGPDHPELATSLNNRA 51
            + Q KY+EA+PL+ RA+KI+E  LGPDHP +AT+LNN A
Sbjct:    2 ESQGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLA 40
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BLAST of mRNA_L-elsbetiae_contig8234.17239.1 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 4.170e-8
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:   15 QKKYDEADPLFVRAIKIQEATLGPDHPELATSLNNRAILLKAQ 57
            Q KYD A+PL+VR++ I+E   GPDHPE+ATSLNNRA  L+ Q
Sbjct:  395 QGKYDAAEPLYVRSLAIREKVYGPDHPEVATSLNNRAEFLRHQ 437
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BLAST of mRNA_L-elsbetiae_contig8234.17239.1 vs. uniprot
Match: D7FHK2_ECTSI (Peptidase-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHK2_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 5.700e-8
Identity = 26/41 (63.41%), Postives = 35/41 (85.37%), Query Frame = 0 
Query:   17 KYDEADPLFVRAIKIQEATLGPDHPELATSLNNRAILLKAQ 57
            KY +ADP ++ AI+IQ+ TLGPDH +LAT+LN RA+LLK+Q
Sbjct:  134 KYAQADPAYLEAIEIQQQTLGPDHADLATTLNGRALLLKSQ 174
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BLAST of mRNA_L-elsbetiae_contig8234.17239.1 vs. uniprot
Match: A0A6H5L045_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L045_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.290e-7
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0 
Query:   17 KYDEADPLFVRAIKIQEATLGPDHPELATSLNNRAILLKAQ 57
            KY EADPL++RAI I +  LGPDHP+LA  LNNRA LLK Q
Sbjct:   11 KYAEADPLYLRAIDIGKKMLGPDHPDLAAWLNNRAGLLKKQ 51
[Close]
BLAST of mRNA_L-elsbetiae_contig8234.17239.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 2.560e-7
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 0 
Query:   13 DPQKKYDEADPLFVRAIKIQEATLGPDHPELATSLNNRAILLKAQ 57
            D Q KY EA+PL+ R+  IQE  LG +HP++A+SLNNR  LL+AQ
Sbjct:   16 DIQGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLRAQ 60
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8234.17239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPW2_ECTSI2.990e-1368.75TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
D8LLM3_ECTSI4.440e-966.67Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5KSC7_9PHAE5.860e-963.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUC1_9PHAE6.260e-970.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
D7G6W2_ECTSI9.300e-967.39NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
UPI0013D295282.190e-861.54tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
A0A6H5J9V8_9PHAE4.170e-862.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHK2_ECTSI5.700e-863.41Peptidase-like n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5L045_9PHAE2.290e-768.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3K8_9PHAE2.560e-757.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 44..77
e-value: 0.16
score: 21.1
coord: 86..119
e-value: 2.1
score: 17.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 9..137
e-value: 1.1E-40
score: 141.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 15..134
NoneNo IPR availablePFAMPF13424TPR_12coord: 47..118
e-value: 9.8E-17
score: 61.0
NoneNo IPR availablePFAMPF13374TPR_10coord: 15..42
e-value: 8.3E-6
score: 25.5
NoneNo IPR availablePANTHERPTHR45783:SF5KINESIN LIGHT CHAIN 3coord: 15..111
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 75..133
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 15..111
NoneNo IPR availablePANTHERPTHR45783:SF5KINESIN LIGHT CHAIN 3coord: 75..133
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 44..119
score: 10.002

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8234contigL-elsbetiae_contig8234:4237..5213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8234.17239.1mRNA_L-elsbetiae_contig8234.17239.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8234 4237..5213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8234.17239.1 ID=prot_L-elsbetiae_contig8234.17239.1|Name=mRNA_L-elsbetiae_contig8234.17239.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=137bp
MISLHCRTRNPLDPQKKYDEADPLFVRAIKIQEATLGPDHPELATSLNNR
AILLKAQGKLDEADTSLERAIKIWEKAVGTDHPNVAKSLETRANLLQAQG
KLDEAEPLFERGFEIQEKALGRDHPSLADGLVSRAKL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom