prot_L-elsbetiae_contig823.17231.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig823.17231.1
Unique Nameprot_L-elsbetiae_contig823.17231.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length154
Homology
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BLAST of mRNA_L-elsbetiae_contig823.17231.1 vs. uniprot
Match: D7FNM5_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNM5_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 3.250e-64
Identity = 103/125 (82.40%), Postives = 112/125 (89.60%), Query Frame = 0 
Query:    1 MNELFTRAQQRFAREAGSDERQFEMRVRKVLPLIPPIATKIGELRGDGEDSITEGAKAYLNELQEYRSRNFPSTEDQDREFLSYCLGDGRGKVDPRLADVVRYRLGRKESHSTAAGILEEFLTPA 125
            MNELF RAQQRFAREAG DER+FE+ VRKVLPL+PPIATKIGEL GDGED + +GA+ YL ELQ YRS NFPSTE+QDRE LSYCLG+GRGKVDPRLADVVRYRLGRKE+HSTAAGILEEF  PA
Sbjct:  294 MNELFLRAQQRFAREAGGDERRFEIGVRKVLPLVPPIATKIGELMGDGEDGMIKGAELYLEELQAYRSENFPSTEEQDRELLSYCLGNGRGKVDPRLADVVRYRLGRKEAHSTAAGILEEFTAPA 418
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig823.17231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNM5_ECTSI3.250e-6482.40SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig823contigL-elsbetiae_contig823:10681..12277 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig823.17231.1mRNA_L-elsbetiae_contig823.17231.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig823 10643..12430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig823.17231.1 ID=prot_L-elsbetiae_contig823.17231.1|Name=mRNA_L-elsbetiae_contig823.17231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=154bp
MNELFTRAQQRFAREAGSDERQFEMRVRKVLPLIPPIATKIGELRGDGED
SITEGAKAYLNELQEYRSRNFPSTEDQDREFLSYCLGDGRGKVDPRLADV
VRYRLGRKESHSTAAGILEEFLTPASPTPPATKTPEQVKGGKDEGTSEEG
GGE*
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