prot_L-elsbetiae_contig8225.17230.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8225.17230.1
Unique Nameprot_L-elsbetiae_contig8225.17230.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length115
Homology
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BLAST of mRNA_L-elsbetiae_contig8225.17230.1 vs. uniprot
Match: A0A6H5KCU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU2_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.610e-9
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0 
Query:   56 SILTGIDSEQLQVAGSPPTTYSSVQDYLQFMSHPYAYATNLELIAAQHIYGLEFRINYHG 115
            SI  GI SE +Q+AG P  TY +V +YLQ MS P AYAT++E+ AAQ +Y L  R+   G
Sbjct:  215 SIFVGIISENIQIAGQPQQTYQNVPEYLQLMSVPTAYATHVEIAAAQQLYNLNIRVTLVG 274
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8225.17230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KCU2_9PHAE1.610e-951.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.80coord: 2..115
e-value: 1.5E-11
score: 46.1
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 5..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8225contigL-elsbetiae_contig8225:8238..8582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8225.17230.1mRNA_L-elsbetiae_contig8225.17230.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8225 8238..8582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8225.17230.1 ID=prot_L-elsbetiae_contig8225.17230.1|Name=mRNA_L-elsbetiae_contig8225.17230.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=115bp
IIPEIGDGACLLRCISRRVHNTPDMHRTVRAAIISHMSVNLHTIIPGSGF
STFYDSILTGIDSEQLQVAGSPPTTYSSVQDYLQFMSHPYAYATNLELIA
AQHIYGLEFRINYHG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf