prot_L-elsbetiae_contig8221.17227.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8221.17227.1
Unique Nameprot_L-elsbetiae_contig8221.17227.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length73
Homology
BLAST of mRNA_L-elsbetiae_contig8221.17227.1 vs. uniprot
Match: D8LR94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR94_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 1.220e-27
Identity = 55/71 (77.46%), Postives = 60/71 (84.51%), Query Frame = 0
Query:    3 LEILHSIPNRVAPRRQAGREHPVVMVVRELWPVLLAVSAKHQSSGQVLEKLCRFFKHAMRTCREHFEPLLK 73
            L+ L  + +R  P  QAGREHPVVMVVRELWPVL AVSAKHQSSGQV EKL RFFKHAMRTC+EHFEPLL+
Sbjct:  685 LDRLTVVVSRANPVMQAGREHPVVMVVRELWPVLEAVSAKHQSSGQVFEKLSRFFKHAMRTCKEHFEPLLR 755          
BLAST of mRNA_L-elsbetiae_contig8221.17227.1 vs. uniprot
Match: A0A8J2SEP9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEP9_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 4.100e-14
Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 0
Query:    3 LEILHSIPNRVAPRRQA--GREHPVVMVVRELWPVLLAVSAKHQSSGQVLEKLCRFFKHAMRTCREHFEPLL 72
            L+ L ++    +P  Q   GR HPV+ V   LWPV  AVS K ++S  V+EKLCR +KHAMR+CR+HFEP+L
Sbjct:  658 LDRLTAVMRCASPSSQLLNGRPHPVLEVFANLWPVFEAVSIKMKTSHLVIEKLCRCYKHAMRSCRKHFEPML 729          
BLAST of mRNA_L-elsbetiae_contig8221.17227.1 vs. uniprot
Match: A0A7S3NIA9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIA9_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 4.430e-12
Identity = 28/55 (50.91%), Postives = 41/55 (74.55%), Query Frame = 0
Query:   19 AGREHPVVMVVRELWPVLLAVSAKHQSSGQVLEKLCRFFKHAMRTCREHFEPLLK 73
            A R HPV+  + +LWPV  AV+ ++  S Q++E+LCR +KHAMR+CR  FEP+L+
Sbjct:  819 ANRRHPVLSFIEKLWPVFEAVAERYGDSPQLIERLCRCYKHAMRSCRTQFEPMLE 873          
BLAST of mRNA_L-elsbetiae_contig8221.17227.1 vs. uniprot
Match: F0Y5X0_AURAN (Xpo1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5X0_AURAN)

HSP 1 Score: 59.7 bits (143), Expect = 1.090e-8
Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   20 GREHPVVMVVRELWPVLLAVSAKHQSSGQVL--EKLCRFFKHAMRTCREHFEPLL 72
             R HPV+ +  +LWPV  A+ AK++ S  V+  EKLCR +KHAMR+CR+ F P+L
Sbjct:  694 SRPHPVLELFDKLWPVFEALGAKYRESTVVVVVEKLCRCYKHAMRSCRKAFAPML 748          
BLAST of mRNA_L-elsbetiae_contig8221.17227.1 vs. uniprot
Match: A0A7S3L1F1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1F1_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 6.090e-7
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    8 SIPNRVAPRRQAGREHPVVMVVRELWPVLLAVSAKHQSSGQVLEKLCRFFKHAMRTC-REHFEPLLK 73
             +PNRV         HP+V +++ LW VL   S K  +  QV EK+CR +KH++R+C +E + PLL+
Sbjct:   88 KMPNRV------DGSHPIVAMLQSLWAVLDQASKKFANDTQVAEKICRLYKHSLRSCSKEAYMPLLQ 148          
BLAST of mRNA_L-elsbetiae_contig8221.17227.1 vs. uniprot
Match: A0A4D9CYX3_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYX3_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 3.050e-6
Identity = 32/70 (45.71%), Postives = 39/70 (55.71%), Query Frame = 0
Query:   12 RVAPRRQAGRE-------HPVVMVVRELWPVLLAVSAKHQSSGQVLEKLCRFFKHAMRTCREH--FEPLL 72
            R+  RR  GRE        P V  V+ L PVL A+  +++    V+EKLCRFFKHA RT R    F PLL
Sbjct:  782 RLMGRRGGGREGEREGGTSPAVGAVQSLLPVLQAIYDEYKGKPDVMEKLCRFFKHAFRTARPKTAFYPLL 851          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8221.17227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LR94_ECTSI1.220e-2777.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J2SEP9_9STRA4.100e-1451.39Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3NIA9_9STRA4.430e-1250.91Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0Y5X0_AURAN1.090e-850.91Xpo1 domain-containing protein n=1 Tax=Aureococcus... [more]
A0A7S3L1F1_9STRA6.090e-740.30Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A4D9CYX3_9STRA3.050e-645.71Importin N-terminal domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..73
e-value: 8.6E-16
score: 59.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8221contigL-elsbetiae_contig8221:8580..8798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8221.17227.1mRNA_L-elsbetiae_contig8221.17227.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8221 8580..8810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8221.17227.1 ID=prot_L-elsbetiae_contig8221.17227.1|Name=mRNA_L-elsbetiae_contig8221.17227.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=73bp
MFLEILHSIPNRVAPRRQAGREHPVVMVVRELWPVLLAVSAKHQSSGQVL
EKLCRFFKHAMRTCREHFEPLLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like