prot_L-elsbetiae_contig8218.17222.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8218.17222.1
Unique Nameprot_L-elsbetiae_contig8218.17222.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length470
Homology
BLAST of mRNA_L-elsbetiae_contig8218.17222.1 vs. uniprot
Match: A0A6H5JCV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV2_9PHAE)

HSP 1 Score: 564 bits (1453), Expect = 6.380e-188
Identity = 342/521 (65.64%), Postives = 357/521 (68.52%), Query Frame = 0
Query:    1 MSGMYPRQWPERKNQQAPPRKRRLVTYTMQPLSEQPGHRFGVNRILRLSGXXXXXXXXXLSAGRDGVVRRWDVSSML--APXXXXXXXXXXXXXXXXXXXXXXHPQPPCTGVFASHTDWVTGLAVAEDRVMVSASYDGTLKLWDLASAARAGSGXXXXXXXXX--------------------------GRHRSLGEEEGGRVATNGAGSHEYQGAATSTPPPRPP-----------RPNPLATVAGHGDYVKCLAYAQQGGVLVSGGLDKRILLWDLQQMSAPLMTLRGXXXXXXXXXXXXXXXXXXXXXX-------ADYS-----QHAXXXXXXSGA--LSDEEGSSWAHLRDPSRVVLRPGHAATGPNEVLELCRQNKGSVHCVDAAADASLVASGGTDRMIRLLDPRAGGGKAGKICKLDGHGDNVRCVKIDEGGTRVISGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDFDVYYSGGRGRRVYRTDFRTGESTLVCVTNSEVLDMALE 468
            MSG+ PRQW +RK Q AP RKRRLVTYTMQPL+EQPGHRFGVNRI+RL           LSAGRDGV+RRWDVSSML  A                       HPQPPCTGVFASHTDWVTGLAVAE R+M SASYDGTLKLWDLA+A RA +        XX                          G     GEE  G       G H  Q  A                    RPN LATVAGHGDYVKCL YA+Q GVLVSGGLDKRILLWDLQ+MSAPLM LRG    XXXXXXXXXXXXXXXXXX       A YS     Q        +GA  LSDE    W HLRDP RV LR G AA GPNEVLELCRQNKGSVHCV AAADASLVASGGTDRMIRLLDPRAGG +A KICKLDGHGDNVRCVKIDEGGTRV+SGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCD DVYYSGGRGRRVYRTDFRTGES+LVCVT+SEVLDM LE
Sbjct:    1 MSGINPRQWTDRKKQ-APARKRRLVTYTMQPLNEQPGHRFGVNRIMRLG------EDILLSAGRDGVIRRWDVSSMLDQAAARGSAGSGRRDDADDADEHQLQHPQPPCTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDLAAADRARNADKGGREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLGGQGEEAAGEANGLRTGMHGVQDTAARAXXXXXXXXXXXXXXXXXRPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAXXXXXXXXXXXXXXXXXXXXXMMNSAGYSPAAGRQQVGGQRQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGAQAAKICKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELE 514          
BLAST of mRNA_L-elsbetiae_contig8218.17222.1 vs. uniprot
Match: D8LJZ3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ3_ECTSI)

HSP 1 Score: 429 bits (1102), Expect = 4.290e-140
Identity = 281/451 (62.31%), Postives = 292/451 (64.75%), Query Frame = 0
Query:   29 MQPLSEQPGHRFGVNRILRLSGXXXXXXXXXLSAGRDGVVRRWDVSSMLAPXXXXXXXXXXXXXXXXXXXXXXHPQPPCTGVFASHTDWVTGLAVAEDRVMVSASYDGTLKLWDLASAARAGSGXXXXXXXXXGRHRSLGEEEGGRVATNGAGSHEYQGAATSTPPPRPPRPNPLATVAGHGDYVKCLAYAQQGGVLVSGGLDKRILLWDLQQMSAPLMTLRGXXXXXXXXXXXXXXXXXXXXXXAD----YSQHAXXXXXX-----SGA--LSDEEGSSWAHLRDPSRVVLRPGHAATGPNEVLELCRQNKGSVHCVDAAADASLVASGGTDRMIRLLDPRAGGGKAGKICKLDGHGDNVRCVKIDEGGTRVISGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDFDVYYSGGRGRRVYRTDFRTGESTLVCVTNSEVLDMALE 468
            MQPL+ QPGHRFGVNRILRL           LSAGRDGVVRRWDVSSML                                                D+                A+   AGSG         G H        G                         RPN LATVAGHGDYVKCL YA+Q GVLVSGGLDKRILLWDLQ+MSAPLM LRG   XXXXXXXXXXXXXXXXXXX      YS   XXXXXX     +GA  LSDE    W HLRDP RV LR G AA GPNEVLELCRQNKGSVHCV AAADASLVASGGTDRMIRLLDPRAGGG+A K+CKLDGHGDNVRCVKIDEGGTRV+SGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCD DVYYSGGRGRRVYRTDFRTGES+LVCVT+SEVLDM LE
Sbjct:    1 MQPLNGQPGHRFGVNRILRLG------EDSLLSAGRDGVVRRWDVSSML------------------------------------------------DQA---------------AARGSAGSGRRDD-----GMH--------GGXXXXXXXXXXXXXXXXXXXXXXXLRPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGXXXXXXXXXXXXXXXXXXXXXXXXGYSPXXXXXXXXXXXQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELE 369          
BLAST of mRNA_L-elsbetiae_contig8218.17222.1 vs. uniprot
Match: D8UDZ2_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UDZ2_VOLCA)

HSP 1 Score: 108 bits (270), Expect = 1.900e-21
Identity = 54/143 (37.76%), Postives = 89/143 (62.24%), Query Frame = 0
Query:  326 RQNKGSVHCVDAAADASLVASGGTDRMIRLLDPRAGGGKAGKICKLDGHGDNVRCVKIDEGGTRVISGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDFDVYYSGGRGRRVYRTDFRTGESTLVCVTNSEVLDMALE 468
            R+   SV+ +  +  A L+A+G ++ ++RLLDPR GGG    +CKL GH D VR + ++  GT+++SG+SDGTI++WDV  + C+  +++   SVWA+          YS GR R ++RT+ +T  S L+ + N  V  +A++
Sbjct:  179 REEACSVYSLALSPSAGLLAAGTSESLVRLLDPRTGGG----VCKLRGHKDVVRALAVNSCGTKLLSGASDGTIKLWDVGMRRCVQTFQVHADSVWALLSPDDSLSYVYSAGRDRALFRTNTQTCFSELLALENGPVCALAVD 317          
BLAST of mRNA_L-elsbetiae_contig8218.17222.1 vs. uniprot
Match: E4WZH7_OIKDI (WD repeat-containing protein 48 n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4WZH7_OIKDI)

HSP 1 Score: 107 bits (268), Expect = 2.040e-21
Identity = 72/236 (30.51%), Postives = 104/236 (44.07%), Query Frame = 0
Query:  203 LATVAGHGDYVKCLAYAQQGGVLVSGGLDKRILLWDLQQMSAPLMTLRGXXXXXXXXXXXXXXXXXXXXXXADYSQHAXXXXXXSGALSDEEGSSWAHLRDPSRVVLRPGHAATGPNEVLELCRQNKGSVHCVDAAADASLVASGGTDRMIRLLDPRAGGGKAGKICKLDGHGDNVRCVKIDEGGTRVISGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDFDVYYSGGR 438
            ++T+  H DYV  LAYA +   L+S G D +I LWD+  ++   +T+                                                     D S V     H AT              S++CVD    A+LV +GGT+++IRL DPR       K+ KL GH DNVR VK+   GT+ +S SSDGT+R+W + +Q  + V++L    +WA+Q     F   Y+GGR
Sbjct:    1 MSTIRTHKDYVSSLAYAPETNKLISAGFDDQIYLWDVNAIAT--LTV-----------------------------------------------------DNSEVTCMNLHGATN-------------SIYCVDTDPQANLVVAGGTEKLIRLWDPRT----QEKLMKLRGHKDNVRAVKLSRDGTQCVSASSDGTVRLWSIGEQRVIRVFQLSEHGIWALQTDE-HFRWMYAGGR 163          
BLAST of mRNA_L-elsbetiae_contig8218.17222.1 vs. uniprot
Match: A0A8J4CQE7_9CHLO (Uncharacterized protein n=4 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CQE7_9CHLO)

HSP 1 Score: 105 bits (263), Expect = 1.700e-20
Identity = 56/139 (40.29%), Postives = 90/139 (64.75%), Query Frame = 0
Query:  331 SVHCVDAAADASLVASGGTDRMIRLLDPRAGGGKAGKICKLDGHGDNVRCVKIDEGGTRVISGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDFDVY-YSGGRGRRVYRTDFRTGESTLVCVTNSEVLDMALE 468
            SV+ +  +  A L+A+G ++ ++RLLDPRAG      +CKL GH D VR + ++  GTR++SG+SDG I++WDV  + C+  +E+   SVW++  SPCD   Y YS GR R +YRT+ +T  + L+ +  + V  +A++
Sbjct:  168 SVYALALSPSARLLAAGTSESLVRLLDPRAGT----SVCKLKGHKDVVRTLAVNSCGTRLLSGASDGAIKLWDVGMRRCIQTFEVHTDSVWSLV-SPCDSLTYVYSAGRDRAIYRTNTQTCCAELLALEEAPVRALAVD 301          
BLAST of mRNA_L-elsbetiae_contig8218.17222.1 vs. uniprot
Match: A0A8J4BNG0_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BNG0_9CHLO)

HSP 1 Score: 103 bits (258), Expect = 7.160e-20
Identity = 55/144 (38.19%), Postives = 91/144 (63.19%), Query Frame = 0
Query:  326 RQNKGSVHCVDAAADASLVASGGTDRMIRLLDPRAGGGKAGKICKLDGHGDNVRCVKIDEGGTRVISGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDFDVY-YSGGRGRRVYRTDFRTGESTLVCVTNSEVLDMALE 468
            R+   SV+ +     A L+A+G ++ ++RLLDPR+G      +CKL GH D VR + ++  GT+++SG+SDG I++WDV  + C+  +E+   SVW++  SPCD   Y YS GR R +YRT+ +T  + L+ +  + V  +A++
Sbjct:  163 REEPCSVYALALGPSARLLAAGTSESLVRLLDPRSGR----SVCKLKGHKDVVRTLAVNSCGTKLLSGASDGAIKLWDVGMRRCIQTFEVHTDSVWSLV-SPCDSLAYVYSAGRDRAIYRTNTQTCCAELLALEEAPVRALAVD 301          
BLAST of mRNA_L-elsbetiae_contig8218.17222.1 vs. uniprot
Match: A0A7J7H059_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7H059_CAMSI)

HSP 1 Score: 103 bits (258), Expect = 7.560e-20
Identity = 113/466 (24.25%), Postives = 166/466 (35.62%), Query Frame = 0
Query:   19 PRKRRLVTYTMQPLSEQPGHRFGVNRILRLSGXXXXXXXXXLSAGRDGVVRRWDVSSMLAPXXXXXXXXXXXXXXXXXXXXXXHPQPPCTGVFASHTDWVTGLAVAEDRVMVSASYDGTLKL---WDLASAARAGSGXXXXXXXXXGRHRSLGEEEGGRVATNGAGSHEYQGAATSTPPPRPPRPNPLATVAGHGDYVKCLAYA-QQGGVLVSGGLDKRILLWDLQQMSAPLMTLRGXXXXXXXXXXXXXXXXXXXXXXADYSQHAXXXXXXSGALSDEEGSSWAHLRDPSRVVLRPGHAATGPNEVLELCRQNKGSVHCVDAAADASLVASGGTDRMIRLLDPRAGGGKAGKICKLDGHGDNVRCVKIDEGGTRV----------ISGSSDGTI---RVWDVRQQCCLGVYELPGGSVWAMQPSPCDFDVYYSGGRGRRVYRTDFRTGESTLVCVTNSEVLDMAL 467
            PRK + +TY +   ++   H  G+N +  L            +  RDG ++RW ++   A                             +  F SH DWV    +A    +VS S D TLK+   W+  S                                         G+ T T             +  H DYV  LA A +   V+ SGGL   + +WDL+   AP                               +         +G  +    +S   +   + + L   H       V    + +K SV+ +      +L+ SGGT++++R+ DPR G     K  KL GH DNVR + +D  G  V          I G  D      R+WD+ QQ C+  Y +   SVWA+  S   F   YSGGR   +Y TD  T ES L+C     +L +AL
Sbjct:  277 PRKEKRLTYVLND-TDDTKHCAGINCLAVLKSSPADGCEYLFTGSRDGTLKRWALAEDGATY---------------------------SATFESHVDWVNDAVIAGGNTLVSCSSDATLKIHQTWNCLS----------------------------------------DGSCTRT-------------LRQHSDYVTSLAAAPKNSNVVASGGLGGEVFIWDLEAAVAPTSKTSD-------------------------ATEDDCSNGVNGVGNSVPITSARTISSNNSISL---HMTQSHGYVPIAAKGHKESVYALGMNDSGTLLVSGGTEKVVRVWDPRTGS----KTMKLRGHTDNVRALLLDSTGRLVALSCIAMLIWILGFYDQFSFFNRLWDLGQQRCVHSYAVHTDSVWALA-SNSTFSHVYSGGRDLSLYLTDLATRESILLCTKEHPILQLAL 628          
BLAST of mRNA_L-elsbetiae_contig8218.17222.1 vs. uniprot
Match: K1PXR3_CRAGI (WD repeat-containing protein 48 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1PXR3_CRAGI)

HSP 1 Score: 102 bits (254), Expect = 2.190e-19
Identity = 76/266 (28.57%), Postives = 119/266 (44.74%), Query Frame = 0
Query:  203 LATVAGHGDYVKCLAYAQQGGVLVSGGLDKRILLWDLQQMSAPLMTLRGXXXXXXXXXXXXXXXXXXXXXXADYSQHAXXXXXXSGALSDEEGSSWAHLRDPSRVVLRPGHAATGPNEVLELCRQNKGSVHCVDAAADASLVASGGTDRMIRLLDPRAGGGKAGKICKLDGHGDNVRCVKIDEGGTRVISGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDFDVYYSGGRGRRVYRTDFRTGES-TLVCVTNSEVLDMAL 467
            L ++  H D+V  +   ++G  L+S   D  I +W+  + S  L TLR                        DY +            S     S  +    S V L   +  T  + V E       S++ +      +++ SG T+  +++ DPR        + KL GH DNVR + + + GT+ +SGSSDGTIR+W + QQ C+    +   SVWA+Q +   F   YSGGR +RV+ TD R  +  TL+C   + +L + L
Sbjct:   69 LFSMEHHFDWVNDIVLCREGRALISASSDTTIKVWNAHEGSC-LATLR---------------------THKDYVKCLAYARDKEMVASAGLDRSIVYYDVASLVALTVNNNTTSISSVRETH-----SIYSLAMNPSGTVLVSGSTENSLKVYDPRD---CVTCLMKLKGHTDNVRALVVSKDGTQCLSGSSDGTIRLWSLGQQRCIATLRVHDDSVWALQAND-SFTTVYSGGRDKRVWATDLRNPDQRTLICEEKAPILKLEL 303          
BLAST of mRNA_L-elsbetiae_contig8218.17222.1 vs. uniprot
Match: UPI001C4C6EF9 (LOW QUALITY PROTEIN: WD repeat-containing protein 48-like n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4C6EF9)

HSP 1 Score: 101 bits (251), Expect = 4.220e-19
Identity = 55/147 (37.41%), Postives = 86/147 (58.50%), Query Frame = 0
Query:  328 NKGSVHCVDAAADASLVASGGTDRMIRLLDPRAGGGKAGKICKLDGHGDNVRCVKIDEGGTRV-----ISGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDFDVYYSGGRGRRVYRTDFRTGE-STLVCVTNSEVLDMALE 468
            NK S++ +      +++ SG T++++R+ DPR       K+ KL GH DNV+ + ++  GT+V     +SGSSDGTIR+W + QQ C+  Y +    VWA+Q +   F   YSGGR +++Y TD R  +   L+C   + VL M L+
Sbjct:  167 NKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRT----CAKLMKLKGHTDNVKSLLLNRDGTQVSTDLAVSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEA-FTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKMELD 308          
BLAST of mRNA_L-elsbetiae_contig8218.17222.1 vs. uniprot
Match: A0A6A4VWP6_AMPAM (WD repeat-containing protein 48 homolog n=3 Tax=Thoracicalcarea TaxID=2899756 RepID=A0A6A4VWP6_AMPAM)

HSP 1 Score: 100 bits (248), Expect = 9.800e-19
Identity = 60/157 (38.22%), Postives = 92/157 (58.60%), Query Frame = 0
Query:  314 AATGPNEVLELCRQN--KGSVHCVDAAADASLVASGGTDRMIRLLDPRAGGGKAGKICKLDGHGDNVRCVKIDEGGTRVISGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDFDVYYSGGRGRRVYRTDFRTGESTLVCVTNSE-VLDMAL 467
            A T  N ++     N  K S++ +      ++V +G T++++R+ DPR       ++ KL GH DNVR V +   GT+ +SGSSDGT+++W + QQ C+   +L   SVWA+Q SP DF   YSGGR RR+  T+ R  +S+L+    +  +L MAL
Sbjct:  151 ALTTSNNIVTTSSLNGSKFSIYSLGMNELGTVVIAGSTEKLLRVWDPRT----CDRLMKLRGHADNVRAVLVSRDGTQCLSGSSDGTVKLWSLGQQRCITTLQLHD-SVWALQVSP-DFSRVYSGGRDRRLLVTNLRQPDSSLLLAEETAPILRMAL 301          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8218.17222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCV2_9PHAE6.380e-18865.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJZ3_ECTSI4.290e-14062.31Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8UDZ2_VOLCA1.900e-2137.76Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
E4WZH7_OIKDI2.040e-2130.51WD repeat-containing protein 48 n=1 Tax=Oikopleura... [more]
A0A8J4CQE7_9CHLO1.700e-2040.29Uncharacterized protein n=4 Tax=Volvox reticulifer... [more]
A0A8J4BNG0_9CHLO7.160e-2038.19Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A7J7H059_CAMSI7.560e-2024.25Uncharacterized protein n=1 Tax=Camellia sinensis ... [more]
K1PXR3_CRAGI2.190e-1928.57WD repeat-containing protein 48 n=1 Tax=Crassostre... [more]
UPI001C4C6EF94.220e-1937.41LOW QUALITY PROTEIN: WD repeat-containing protein ... [more]
A0A6A4VWP6_AMPAM9.800e-1938.22WD repeat-containing protein 48 homolog n=3 Tax=Th... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 390..404
score: 40.94
coord: 225..239
score: 37.84
coord: 129..143
score: 42.03
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 199..238
e-value: 2.9E-7
score: 40.1
coord: 364..403
e-value: 6.0E-9
score: 45.7
coord: 28..72
e-value: 1.3
score: 16.3
coord: 104..142
e-value: 5.6E-8
score: 42.5
coord: 318..357
e-value: 0.068
score: 22.3
coord: 406..446
e-value: 67.0
score: 5.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 201..238
e-value: 4.0E-4
score: 21.1
coord: 330..355
e-value: 0.24
score: 12.4
coord: 370..403
e-value: 5.1E-7
score: 30.3
coord: 107..142
e-value: 3.5E-4
score: 21.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 371..405
score: 15.722
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 111..151
score: 13.215
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 206..247
score: 13.516
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 310..466
e-value: 5.8E-26
score: 93.1
NoneNo IPR availablePANTHERPTHR19862:SF16coord: 104..146
coord: 328..468
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 104..146
coord: 328..468
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 390..404
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 225..239
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 129..143
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 325..412
score: 16.296
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 111..247
score: 13.316
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 28..459

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8218contigL-elsbetiae_contig8218:710..7006 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8218.17222.1mRNA_L-elsbetiae_contig8218.17222.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8218 710..7006 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8218.17222.1 ID=prot_L-elsbetiae_contig8218.17222.1|Name=mRNA_L-elsbetiae_contig8218.17222.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=470bp
MSGMYPRQWPERKNQQAPPRKRRLVTYTMQPLSEQPGHRFGVNRILRLSG
GGGDGGGSLLSAGRDGVVRRWDVSSMLAPKGGGQGGGERQQGGDEEQRQQ
QHPQPPCTGVFASHTDWVTGLAVAEDRVMVSASYDGTLKLWDLASAARAG
SGAAAGAAGAGGRHRSLGEEEGGRVATNGAGSHEYQGAATSTPPPRPPRP
NPLATVAGHGDYVKCLAYAQQGGVLVSGGLDKRILLWDLQQMSAPLMTLR
GGGGGGGGGGGGRRITNNAMMMDADYSQHAASAGGGSGALSDEEGSSWAH
LRDPSRVVLRPGHAATGPNEVLELCRQNKGSVHCVDAAADASLVASGGTD
RMIRLLDPRAGGGKAGKICKLDGHGDNVRCVKIDEGGTRVISGSSDGTIR
VWDVRQQCCLGVYELPGGSVWAMQPSPCDFDVYYSGGRGRRVYRTDFRTG
ESTLVCVTNSEVLDMALETA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf