prot_L-elsbetiae_contig8216.17221.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8216.17221.1
Unique Nameprot_L-elsbetiae_contig8216.17221.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length69
Homology
BLAST of mRNA_L-elsbetiae_contig8216.17221.1 vs. uniprot
Match: A0A6H5LIE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIE2_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 7.380e-26
Identity = 54/68 (79.41%), Postives = 62/68 (91.18%), Query Frame = 0
Query:    1 KGIEEGEAEGFVVVARDDKPEEGGEAGDSVDNDNSSTSGISNNIMVIVFCALAFVANGGFLVYVFWVM 68
            KGIEEGEA GFVVVA D +PE  G+ G+++DNDN+ST+GISNN+MVIVFCALAFVANGGFLVYVFWVM
Sbjct:  196 KGIEEGEAGGFVVVAPDSEPEHRGQ-GENIDNDNASTNGISNNVMVIVFCALAFVANGGFLVYVFWVM 262          
BLAST of mRNA_L-elsbetiae_contig8216.17221.1 vs. uniprot
Match: D7FR44_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR44_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 7.540e-23
Identity = 52/67 (77.61%), Postives = 61/67 (91.04%), Query Frame = 0
Query:    1 KGIEEGEAEGFVVVARDDKPEEGGEAGDSVDNDNSSTSGISNNIMVIVFCALAFVANGGFLVYVFWV 67
            KGIEEGEA GFVVVA D +P++  + G++VDNDN+ST+GISNN+MVIVFCALAFVANGGFLVYVFWV
Sbjct:   62 KGIEEGEAGGFVVVAPDSEPKQR-DQGENVDNDNASTNGISNNVMVIVFCALAFVANGGFLVYVFWV 127          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8216.17221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LIE2_9PHAE7.380e-2679.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR44_ECTSI7.540e-2377.61EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..43
NoneNo IPR availableTMHMMTMhelixcoord: 44..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8216contigL-elsbetiae_contig8216:4373..5739 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8216.17221.1mRNA_L-elsbetiae_contig8216.17221.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8216 3377..5739 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8216.17221.1 ID=prot_L-elsbetiae_contig8216.17221.1|Name=mRNA_L-elsbetiae_contig8216.17221.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=69bp
KGIEEGEAEGFVVVARDDKPEEGGEAGDSVDNDNSSTSGISNNIMVIVFC
ALAFVANGGFLVYVFWVM*
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