prot_L-elsbetiae_contig8204.17208.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8204.17208.1
Unique Nameprot_L-elsbetiae_contig8204.17208.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length216
Homology
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BLAST of mRNA_L-elsbetiae_contig8204.17208.1 vs. uniprot
Match: A0A6H5L9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9V8_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 2.110e-28
Identity = 90/123 (73.17%), Postives = 99/123 (80.49%), Query Frame = 0 
Query:   96 MVVPPYPPGSIQAQQMAXXXXXXXXXXXXXXXXXA--GITPHHMAGVPPHPPHVMAGARGPMPPQQFPQPLYRAAMGQSPQVFMQPPQAGMRMPMAPQQMQGFPPQGMPIMGQPGAPGQGPPP 216
            MVVP +PPG +QAQ   XXXXXXXXXXXXXXXXX    + PHHMAGV   PPHVMAGARGPMPPQQFPQP+YRAAMGQ PQ+FMQPP    RMPMAP Q+QGFPPQG+ ++GQPG  G  PPP
Sbjct:    1 MVVPTFPPGPLQAQXXXXXXXXXXXXXXXXXXXXXXXAMNPHHMAGV--VPPHVMAGARGPMPPQQFPQPMYRAAMGQPPQMFMQPP----RMPMAPGQIQGFPPQGIQVVGQPG--GAAPPP 115
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BLAST of mRNA_L-elsbetiae_contig8204.17208.1 vs. uniprot
Match: D7FVW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW5_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.400e-19
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 0 
Query:  148 MAGARGPMPPQQFPQPLYRAAMGQSPQVFMQPPQAGMRMPMAPQQMQGFPPQGMPIMGQPG 208
            MAGARGPMPPQQFPQP+YRAAMGQ PQ+FMQPP    RMPMAP Q+QGFPPQG+ ++GQPG
Sbjct:    1 MAGARGPMPPQQFPQPMYRAAMGQPPQMFMQPP----RMPMAPGQIQGFPPQGIQVVGQPG 57
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8204.17208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L9V8_9PHAE2.110e-2873.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVW5_ECTSI1.400e-1978.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8204contigL-elsbetiae_contig8204:3337..4316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8204.17208.1mRNA_L-elsbetiae_contig8204.17208.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8204 2995..4316 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8204.17208.1 ID=prot_L-elsbetiae_contig8204.17208.1|Name=mRNA_L-elsbetiae_contig8204.17208.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=216bp
MQHQQHQHPHHAQQHQAQQHAQQHAQQHAQQQQQQQLQHQARSQPQQPQQ
QQQQQPQHPLTPQQHPSTPQQQQPIPAAVPPGTPGAPTAGPGGAHMVVPP
YPPGSIQAQQMAAVAAAAAAAAAAAGGGGAGITPHHMAGVPPHPPHVMAG
ARGPMPPQQFPQPLYRAAMGQSPQVFMQPPQAGMRMPMAPQQMQGFPPQG
MPIMGQPGAPGQGPPP
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