prot_L-elsbetiae_contig820.17201.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig820.17201.1
Unique Name	prot_L-elsbetiae_contig820.17201.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	182

Homology

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BLAST of mRNA_L-elsbetiae_contig820.17201.1 vs. uniprot
Match: A0A6H5KBS3_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS3_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 1.040e-115
Identity = 171/206 (83.01%), Postives = 176/206 (85.44%), Query Frame = 0

Query:    1 MKMSFESELGAQAPLGFFDPLGLMIDQ-------------------------DQERFDRLRYVEVKHGRVAMLAVAGHLTAQNYRFPGYLSLDAKLTFADMPNGVAAISKIPPLGLAQIVGFIGFLELSVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMVHEEISNQPYIINDLLNAPYQFN 181
            MKMSFESELGAQ PLGFFDPLGL+IDQ                         DQERFDRLRYVEVKHGR++MLAVAGHL AQNYRFPGYLS DAKLTFADMPNGVAAISKIPPLGLAQIV FIGFLEL+VMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMM+HEEISNQPYIINDLLNAPY FN
Sbjct:    1 MKMSFESELGAQPPLGFFDPLGLLIDQVVPQLPPSCQSSLLVICADGLEPWEDQERFDRLRYVEVKHGRISMLAVAGHLVAQNYRFPGYLSYDAKLTFADMPNGVAAISKIPPLGLAQIVAFIGFLELNVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMIHEEISNQPYIINDLLNAPYTFN 206

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BLAST of mRNA_L-elsbetiae_contig820.17201.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 303 bits (775), Expect = 4.040e-103
Identity = 146/181 (80.66%), Postives = 163/181 (90.06%), Query Frame = 0

Query:    1 MKMSFESELGAQAPLGFFDPLGLMIDQDQERFDRLRYVEVKHGRVAMLAVAGHLTAQNYRFPGYLSLDAKLTFADMPNGVAAISKIPPLGLAQIVGFIGFLELSVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMVHEEISNQPYIINDLLNAPYQFN 181
            MKMSFE E+GAQAPLGF+DPLGL+ D DQERF+RLRYVEVKHGR+AMLA+AGHLT QN R PG LS  A L+FADMPNGVAA+SKIPP GLAQI GFIGFLEL+VMKNVEGSFPGD T+GGNPFA+ WDAMSEET+ SKRAIELNNGRAAQMGILA+MVHEE++N+PY+INDLL A Y FN
Sbjct:    2 MKMSFELEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 182

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BLAST of mRNA_L-elsbetiae_contig820.17201.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 303 bits (775), Expect = 1.360e-102
Identity = 145/181 (80.11%), Postives = 162/181 (89.50%), Query Frame = 0

Query:    1 MKMSFESELGAQAPLGFFDPLGLMIDQDQERFDRLRYVEVKHGRVAMLAVAGHLTAQNYRFPGYLSLDAKLTFADMPNGVAAISKIPPLGLAQIVGFIGFLELSVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMVHEEISNQPYIINDLLNAPYQFN 181
            MKMSFESE+GAQAPLGF+DPLGL+ D DQERF+RLRYVEVKHGR+AMLA+AGHLT QN R PG LS  A L+FADMPNGVAA+SKIPP GLAQI  FIGFLEL+VMKNVEGSFPGD T+GGNPF A WDAMSEET+ SKRAIELNNGRAAQMGILA+MVHEE++N+PY+INDL+ A Y FN
Sbjct:   37 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTFN 217

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BLAST of mRNA_L-elsbetiae_contig820.17201.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 301 bits (772), Expect = 3.160e-102
Identity = 147/181 (81.22%), Postives = 160/181 (88.40%), Query Frame = 0

Query:    1 MKMSFESELGAQAPLGFFDPLGLMIDQDQERFDRLRYVEVKHGRVAMLAVAGHLTAQNYRFPGYLSLDAKLTFADMPNGVAAISKIPPLGLAQIVGFIGFLELSVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMVHEEISNQPYIINDLLNAPYQFN 181
            MKMSFESE+GAQAPLGF+DPLGL+ D DQERF+RLRYVEVKHGR+AMLA+AGHLT QN R PG LS  A L+FADMPNGVAA+SKIPP GLAQI GFIGFLEL+VMKNVEGSFPGD  IGGNPFA+ WD+MS ET+ SKRAIELNNGRAAQMGIL MMVHEE+SNQPYI NDLL A Y FN
Sbjct:   31 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTFN 211

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BLAST of mRNA_L-elsbetiae_contig820.17201.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 4.550e-102
Identity = 144/181 (79.56%), Postives = 161/181 (88.95%), Query Frame = 0

Query:    1 MKMSFESELGAQAPLGFFDPLGLMIDQDQERFDRLRYVEVKHGRVAMLAVAGHLTAQNYRFPGYLSLDAKLTFADMPNGVAAISKIPPLGLAQIVGFIGFLELSVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMVHEEISNQPYIINDLLNAPYQFN 181
            MKMSFESE+GAQ PLGF+DPLGL+ D DQERF+RLRYVEVKHGR+AMLA+AGHLT QN R PG LS  A L+FADMPNGVAA+SKIPP GLAQI  FIGFLEL+VMKNVEGSFPGD T+GGNPF + WDAMSEET+ SKRAIELNNGRAAQMGILA+MVHEE++N+PY+INDLL A Y FN
Sbjct:    1 MKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNFN 181

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BLAST of mRNA_L-elsbetiae_contig820.17201.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 1.630e-101
Identity = 145/181 (80.11%), Postives = 161/181 (88.95%), Query Frame = 0

Query:    1 MKMSFESELGAQAPLGFFDPLGLMIDQDQERFDRLRYVEVKHGRVAMLAVAGHLTAQNYRFPGYLSLDAKLTFADMPNGVAAISKIPPLGLAQIVGFIGFLELSVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMVHEEISNQPYIINDLLNAPYQFN 181
            MKMSFESE+GAQ PLGF+DPLGL+ D DQERF+RLRYVEVKHGR+AMLA+AGHLT QN R PG LS  A L+FADMPNGVAA+SKIPP GLAQI  F+GFLEL+VMKNVEGSFPGD T GGNPFA+ WDAMSEET+ SKRAIELNNGRAAQMGILA+MVHEE++N+PYIINDLL A Y FN
Sbjct:   38 MKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTFN 218

[Close]

BLAST of mRNA_L-elsbetiae_contig820.17201.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 2.570e-101
Identity = 144/181 (79.56%), Postives = 161/181 (88.95%), Query Frame = 0

Query:    1 MKMSFESELGAQAPLGFFDPLGLMIDQDQERFDRLRYVEVKHGRVAMLAVAGHLTAQNYRFPGYLSLDAKLTFADMPNGVAAISKIPPLGLAQIVGFIGFLELSVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMVHEEISNQPYIINDLLNAPYQFN 181
            MKMSFESE+GAQ PLGF+DPLGL+ D DQERF+RLRYVEVKHGR+AMLA+AGHLT QN R PG LS  A L+FADMPNGVAA+SKIPP GLAQI  F+GFLEL+VMKNVEGSFPGD T GGNPFA+ WDAMSEET+ SKRAIELNNGRAAQMGILA+MVHEE++N+PY+INDLL A Y FN
Sbjct:   41 MKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 221

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BLAST of mRNA_L-elsbetiae_contig820.17201.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 295 bits (755), Expect = 1.460e-99
Identity = 143/181 (79.01%), Postives = 161/181 (88.95%), Query Frame = 0

Query:    1 MKMSFESELGAQAPLGFFDPLGLMIDQDQERFDRLRYVEVKHGRVAMLAVAGHLTAQNYRFPGYLSLDAKLTFADMPNGVAAISKIPPLGLAQIVGFIGFLELSVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMVHEEISNQPYIINDLLNAPYQFN 181
            MKMSFESE+GAQAPLGF+DPLGL+ D DQ+ F+RLRYVEVK GR+AMLA+AGHLT QN R PG LS  A L+FADMPNGVAA+SKIPP GLAQI GFIGFLEL+VMKNVEGSFPGD T+GGNPFA+ WDAMS ET+ SKRAIELNNGRAAQMGILA+MVHEE++N+PY+INDLL A Y FN
Sbjct:   36 MKMSFESEIGAQAPLGFWDPLGLLEDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 216

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BLAST of mRNA_L-elsbetiae_contig820.17201.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 4.470e-99
Identity = 144/181 (79.56%), Postives = 161/181 (88.95%), Query Frame = 0

Query:    1 MKMSFESELGAQAPLGFFDPLGLMIDQDQERFDRLRYVEVKHGRVAMLAVAGHLTAQNYRFPGYLSLDAKLTFADMPNGVAAISKIPPLGLAQIVGFIGFLELSVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMVHEEISNQPYIINDLLNAPYQFN 181
            MKMSFESE+GAQ PLGF+DPLGL+ D DQERF+RLRYVEVKHGR+AMLA+AGHLT QN R PG LS  A L+FADMPNGVAA+SKIPP GLAQI  FIGFLEL+VMKNVEGSFPGD T+GGNPF + WDAMSEET+ SKRAIELNNGRAAQMGILA+MVHEE++N+PY+INDLL A Y FN
Sbjct:  197 MKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 377

[Close]

BLAST of mRNA_L-elsbetiae_contig820.17201.1 vs. uniprot
Match: FCPE_MACPY (Fucoxanthin-chlorophyll a-c binding protein E, chloroplastic n=3 Tax=Phaeophyceae TaxID=2870 RepID=FCPE_MACPY)

HSP 1 Score: 273 bits (699), Expect = 4.250e-91
Identity = 135/181 (74.59%), Postives = 148/181 (81.77%), Query Frame = 0

Query:    1 MKMSFESELGAQAPLGFFDPLGLMIDQDQERFDRLRYVEVKHGRVAMLAVAGHLTAQNYRFPGYLSLDAKLTFADMPNGVAAISKIPPLGLAQIVGFIGFLELSVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMVHEEISNQPYIINDLLNAPYQFN 181
            MKMSFESE+GAQ P+GF+DPLGL+ D DQERFDRLRYVE+KHGR+AMLAV GH+T QN R PG LS    L FAD PNGVAA SKIPPLG  QI+  IG  EL V+K VEGSFPGD T GGN F + WD MSEET+ SKRAIELNNGRAAQMGILAMMVHE++SNQPYIINDL  A YQFN
Sbjct:   32 MKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVVGHITQQNTRLPGMLSFKENLAFADSPNGVAAFSKIPPLGTLQIILAIGCHELFVVKQVEGSFPGDCTTGGNIFQSAWDNMSEETQASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYQFN 212

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig820.17201.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig820.17201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KBS3_9PHAE	1.040e-115	83.01	LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
FCPD_MACPY	4.040e-103	80.66	Fucoxanthin-chlorophyll a-c binding protein D, chl...	[more]
FCPB_MACPY	1.360e-102	80.11	Fucoxanthin-chlorophyll a-c binding protein B, chl...	[more]
FCPF_MACPY	3.160e-102	81.22	Fucoxanthin-chlorophyll a-c binding protein F, chl...	[more]
A0A6H5JDS8_9PHAE	4.550e-102	79.56	LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5KCX6_9PHAE	1.630e-101	80.11	LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
A0A6H5JHT6_9PHAE	2.570e-101	79.56	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
FCPC_MACPY	1.460e-99	79.01	Fucoxanthin-chlorophyll a-c binding protein C, chl...	[more]
D8LNK6_ECTSI	4.470e-99	79.56	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
FCPE_MACPY	4.250e-91	74.59	Fucoxanthin-chlorophyll a-c binding protein E, chl...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 5..181 e-value: 2.8E-25 score: 91.2
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 6..161 e-value: 6.0E-32 score: 111.4
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 2..165
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 2..172
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 2..165

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig820	contig	L-elsbetiae_contig820:8563..9856 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig820.17201.1	mRNA_L-elsbetiae_contig820.17201.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig820 8323..10416 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig820.17201.1 ID=prot_L-elsbetiae_contig820.17201.1|Name=mRNA_L-elsbetiae_contig820.17201.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
MKMSFESELGAQAPLGFFDPLGLMIDQDQERFDRLRYVEVKHGRVAMLAV
AGHLTAQNYRFPGYLSLDAKLTFADMPNGVAAISKIPPLGLAQIVGFIGF
LELSVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAA
QMGILAMMVHEEISNQPYIINDLLNAPYQFN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln