prot_L-elsbetiae_contig8196.17189.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8196.17189.1
Unique Nameprot_L-elsbetiae_contig8196.17189.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length341
Homology
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BLAST of mRNA_L-elsbetiae_contig8196.17189.1 vs. uniprot
Match: D7FZA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA3_ECTSI)

HSP 1 Score: 485 bits (1249), Expect = 9.150e-162
Identity = 262/348 (75.29%), Postives = 287/348 (82.47%), Query Frame = 0 
Query:    1 MVMQKKLRKVISYVARVQDFSLKGPP-PKG-KGTMDAALLKWFRAIPGVGSEALAGVLMTMQDKGVRLHPDSYSVVISKANHDGNKELSETLYKMLLAGNGAPSLSAANATIKGCATIDEALGIMASLEEHGLSADKFTFAALLHCCSNAVNDDLQGQRATQVWEAMKDEEIIPHGGMLASYLLALMRSGGWELALEVRERYRDGSEK--LSHADRHVDKLDFMAREDAVVDGVIANGLVDNRQPKLALAYVLQVVKAREEELVKQMGKR--MERFVDEDNHTVLAGIRACKEAGSCETAMALLAACEARWKTGPLAPEADRREGGGNG--ARYEWRDMLVRTRLSRR 340
            MVMQKKLRKVISYVAR+QD  LKGP   KG K TMD ALLKWFRAIPGV SEA+AGVLMTM DKGVRLHPDSYSVVISKAN DGNKELS TLYKMLLA N APSLSAANA IKG ATIDEAL  + +L E GLS DKFTFAALLHCCS AV DDLQGQRAT+VWEAM  E I PHGGMLASYLL+LMRS  W+ AL+VRERYR   E+  LSHA+RHV KLDF+ARE+AVVDGV+ANGLVDN+QP LALAYVL+V+KAREEE    +G    ++ F+DEDNHTVLAGIRACK+ GSCETAM LL ACEARW  GPL  +A R +GG  G  A++EWR MLVRTRLSRR
Sbjct:  375 MVMQKKLRKVISYVARIQDLPLKGPSRSKGRKNTMDTALLKWFRAIPGVSSEAMAGVLMTMLDKGVRLHPDSYSVVISKANQDGNKELSGTLYKMLLAANAAPSLSAANAAIKGSATIDEALATVETLREQGLSPDKFTFAALLHCCSAAVGDDLQGQRATEVWEAMCGEGIRPHGGMLASYLLSLMRSADWKTALDVRERYRGDEEEFQLSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQPDLALAYVLEVLKAREEEGASDIGSDSDLKHFIDEDNHTVLAGIRACKQVGSCETAMGLLEACEARWARGPLERDAGRGDGGEEGQWAQHEWRQMLVRTRLSRR 722
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BLAST of mRNA_L-elsbetiae_contig8196.17189.1 vs. uniprot
Match: A0A6H5L791_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L791_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 4.090e-63
Identity = 120/175 (68.57%), Postives = 137/175 (78.29%), Query Frame = 0 
Query:  176 MLASYLLALMRSGGWELALEVRERYRDGSEK--LSHADRHVDKLDFMAREDAVVDGVIANGLVDNRQPKLALAYVLQVVKAREEELVKQMGKR----MERFVDEDNHTVLAGIRACKEAGSCETAMALLAACEARWKTGPLAPEADRREGGGNG----ARYEWRDMLVRTRLSRR 340
            MLASYLLALMRSG W+ AL+VRERYR   E+  LSHA+RHV KLDF+ARE+AVVDGV+ANGLVDN+QP LALAYVL+V+KAREE      G      ++ F+DEDNHTVLAGIRACK+AGSCETA+ LL ACEARW  GPL  E D   GGG+     A+YEWR MLVRTRLSRR
Sbjct:    1 MLASYLLALMRSGDWKTALDVRERYRGDKEEFQLSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQPGLALAYVLEVLKAREEGKEGASGNGNDSDLKHFIDEDNHTVLAGIRACKQAGSCETAIGLLEACEARWAKGPL--ERDAGSGGGSEEGQWAQYEWRAMLVRTRLSRR 173
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8196.17189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZA3_ECTSI9.150e-16275.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L791_9PHAE4.090e-6368.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 49..240
e-value: 3.5E-17
score: 64.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8196contigL-elsbetiae_contig8196:448..7609 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8196.17189.1mRNA_L-elsbetiae_contig8196.17189.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8196 442..7609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8196.17189.1 ID=prot_L-elsbetiae_contig8196.17189.1|Name=mRNA_L-elsbetiae_contig8196.17189.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=341bp
MVMQKKLRKVISYVARVQDFSLKGPPPKGKGTMDAALLKWFRAIPGVGSE
ALAGVLMTMQDKGVRLHPDSYSVVISKANHDGNKELSETLYKMLLAGNGA
PSLSAANATIKGCATIDEALGIMASLEEHGLSADKFTFAALLHCCSNAVN
DDLQGQRATQVWEAMKDEEIIPHGGMLASYLLALMRSGGWELALEVRERY
RDGSEKLSHADRHVDKLDFMAREDAVVDGVIANGLVDNRQPKLALAYVLQ
VVKAREEELVKQMGKRMERFVDEDNHTVLAGIRACKEAGSCETAMALLAA
CEARWKTGPLAPEADRREGGGNGARYEWRDMLVRTRLSRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf