prot_L-elsbetiae_contig8187.17180.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8187.17180.1
Unique Nameprot_L-elsbetiae_contig8187.17180.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length339
Homology
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BLAST of mRNA_L-elsbetiae_contig8187.17180.1 vs. uniprot
Match: D7FTD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD6_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.020e-14
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 0 
Query:   43 RPHLFHCILAGSH-AMDRGMYDSIRAAYNSIGHVGCRPAPPFEEWSGMSQLCDHVFCRSMEREVHIIHNTEPLVE 116
            RPH  HC LA SH +  R MYD++   YNSI   GC  APP+EEW  ++Q+CD++FCRS E E+H  H+ E L++
Sbjct:  228 RPHFIHCTLAVSHFSKRRDMYDAMNGVYNSIRPPGCWRAPPYEEWRTITQICDNMFCRSFEAEIHKAHHGEGLMQ 302
[Close]
BLAST of mRNA_L-elsbetiae_contig8187.17180.1 vs. uniprot
Match: A0A6H5K678_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K678_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 3.900e-7
Identity = 28/62 (45.16%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:   45 HLFHCILAG-SHAMDRGMYDSIRAAYNSIGHVGCRPAPPFEEWSGMSQLCDHVFCRSMEREV 105
            H  H  L G ++A  R  Y+++RAAYN +      PAPPFEEW+GMS +CDH +CR++  ++
Sbjct:  605 HNVHTQLWGLANARRREQYEALRAAYNPMRPARLSPAPPFEEWTGMSDICDHPYCRNVAEQM 666
[Close]
BLAST of mRNA_L-elsbetiae_contig8187.17180.1 vs. uniprot
Match: D8LSE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE2_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.170e-6
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:   45 HLFHCILAG-SHAMDRGMYDSIRAAYNSIGHVGCRPAPPFEEWSGMSQLCDHVFCRSMEREV 105
            H  H  L G ++A  R  Y+++RAAYN +      PAPPF+EW+GMS +CDH +CR++  ++
Sbjct:  529 HNAHTQLWGLANARRREHYEALRAAYNPMRPASLSPAPPFDEWTGMSDICDHPYCRNVAEQM 590
[Close]
BLAST of mRNA_L-elsbetiae_contig8187.17180.1 vs. uniprot
Match: D7FTG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTG5_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 3.160e-6
Identity = 33/85 (38.82%), Postives = 42/85 (49.41%), Query Frame = 0 
Query:   45 HLFHCILAGSHAMD----RGMYDSIRAAYNSIGHVGCRPAPPFEEWSGMSQLCDHVFCRSME----REVHIIHNTEPLVEPTDQG 121
            HL H IL    A+D    RG+Y  +R  YN        PAPP EEW G+S  CDH  CR  E    R+   + +T+PL   +  G
Sbjct:  236 HLAHGILGSLAAIDDSRARGLYSRLREVYNPSRLSSSLPAPPLEEWRGISAFCDHFLCRIFEGVIARQALSVFSTQPLCARSGAG 320
[Close]
BLAST of mRNA_L-elsbetiae_contig8187.17180.1 vs. uniprot
Match: A0A6H5K5S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5S2_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 3.190e-5
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0 
Query:   41 SPRPHLFHCIL-AGSHAMDRGMYDSIRAAYNSIGHVGCRPAPPFEEWSGMSQLCDHVFC 98
            +PR H  H  L A ++A  R  Y+++RAAYN +      PAPPFEE +G+S +CDH +C
Sbjct:   79 NPRSHSAHTQLWALANARRREQYEALRAAYNPMRPARLSPAPPFEECTGVSDICDHPYC 137
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8187.17180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FTD6_ECTSI1.020e-1450.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K678_9PHAE3.900e-745.16Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LSE2_ECTSI1.170e-643.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTG5_ECTSI3.160e-638.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5S2_9PHAE3.190e-545.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..338
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.552

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8187contigL-elsbetiae_contig8187:3878..6096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8187.17180.1mRNA_L-elsbetiae_contig8187.17180.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8187 2661..7247 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8187.17180.1 ID=prot_L-elsbetiae_contig8187.17180.1|Name=mRNA_L-elsbetiae_contig8187.17180.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=339bp
MRRITAFAVFNSIRPLFLFRWAPFLLATNPFVASHPRRPLSPRPHLFHCI
LAGSHAMDRGMYDSIRAAYNSIGHVGCRPAPPFEEWSGMSQLCDHVFCRS
MEREVHIIHNTEPLVEPTDQGLVEGLPSSLNDAVSSRTGLQAGSGGRTGL
QAGSGGRTGLQAGSKGRTGLQAGSKGRTGLQVDVGRVHNSASGPVHAGPV
LVEADVVSSTEPPHFQKSTAKQYGGSSAVSGGGAAPQGYRYNLADPVATN
RLAPVPAYPVAAAASASWSGLTAGQEKEREPIARGGAAPAGGPAPQLASA
SMRTATGARQNNTGMTDADLLDISAVLMSEDGPLDEWP*
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