prot_L-elsbetiae_contig8181.17178.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8181.17178.1
Unique Nameprot_L-elsbetiae_contig8181.17178.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length53
Homology
BLAST of mRNA_L-elsbetiae_contig8181.17178.1 vs. uniprot
Match: D7FS68_ECTSI (RNA-splicing ligase RtcB homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS68_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.600e-23
Identity = 46/50 (92.00%), Postives = 50/50 (100.00%), Query Frame = 0
Query:    1 QVPGYFYANDRLEELTFEELKQQSGGKGGGGFLPAVKQIANVAALPGIVK 50
            +VPGYFYANDRLE+LTFEEL+QQSGGKGGGGFLPAVKQIANVAALPG+VK
Sbjct:   31 KVPGYFYANDRLEKLTFEELRQQSGGKGGGGFLPAVKQIANVAALPGVVK 80          
BLAST of mRNA_L-elsbetiae_contig8181.17178.1 vs. uniprot
Match: A0A2C9KM53_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KM53_BIOGL)

HSP 1 Score: 73.6 bits (179), Expect = 6.720e-16
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    1 QVPGYFYANDRLEELTFEELKQQSGGKGGGGFLPAVKQIANVAALPGIV 49
            +V GYFYAN  LE+L F+ELKQ    KG GGFLP +KQIANVAALPGIV
Sbjct:   38 KVDGYFYANPSLEKLMFDELKQSCNSKGFGGFLPGMKQIANVAALPGIV 86          
BLAST of mRNA_L-elsbetiae_contig8181.17178.1 vs. uniprot
Match: A0A7S1GE03_9STRA (RNA-splicing ligase RtcB homolog n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GE03_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.940e-15
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    1 QVPGYFYANDRLEELTFEELKQQSGGKGGGGFLPAVKQIANVAALPGIVK 50
            +VPG FY NDRLE L F+ELKQ S   G GGFLPA+KQ+ANVAALPGIVK
Sbjct:   38 RVPGVFYVNDRLESLMFDELKQFSTASGVGGFLPAMKQLANVAALPGIVK 87          
BLAST of mRNA_L-elsbetiae_contig8181.17178.1 vs. uniprot
Match: A0A8C4S595_ERPCA (RNA-splicing ligase RtcB homolog n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4S595_ERPCA)

HSP 1 Score: 77.4 bits (189), Expect = 2.640e-15
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    1 QVPGYFYANDRLEELTFEELKQQSGGKGGGGFLPAVKQIANVAALPGIV 49
            QV G FY N+ LE+LTF+EL+Q +GG+G GGFLPAVKQI+NVAALPGIV
Sbjct:   31 QVEGIFYVNEPLEKLTFDELQQAAGGEGHGGFLPAVKQISNVAALPGIV 79          
BLAST of mRNA_L-elsbetiae_contig8181.17178.1 vs. uniprot
Match: UPI00077AE157 (tRNA-splicing ligase RtcB homolog n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AE157)

HSP 1 Score: 72.4 bits (176), Expect = 3.390e-15
Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 QVPGYFYANDRLEELTFEELKQQSGGKGGGGFLPAVKQIANVAALPGIVKVE 52
            +V G FY ND LE+L F+ELK  +G +G GGFLP VKQIANVAALPGIV V 
Sbjct:   34 KVEGIFYINDHLEKLMFDELKHWAGTQGVGGFLPGVKQIANVAALPGIVGVR 85          
BLAST of mRNA_L-elsbetiae_contig8181.17178.1 vs. uniprot
Match: UPI00155F371B (tRNA-splicing ligase RtcB homolog n=1 Tax=Etheostoma cragini TaxID=417921 RepID=UPI00155F371B)

HSP 1 Score: 73.2 bits (178), Expect = 6.530e-15
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    1 QVPGYFYANDRLEELTFEELKQQSGGKGG-GGFLPAVKQIANVAALPGIV 49
            QV G FY N+ LE+L FEEL+Q  GG+GG GGFLPA+KQI NVAALPGIV
Sbjct:   31 QVEGIFYVNEPLEKLMFEELRQACGGRGGVGGFLPAMKQIGNVAALPGIV 80          
BLAST of mRNA_L-elsbetiae_contig8181.17178.1 vs. uniprot
Match: UPI000C04ECA2 (tRNA-splicing ligase RtcB homolog n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C04ECA2)

HSP 1 Score: 71.2 bits (173), Expect = 6.590e-15
Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 QVPGYFYANDRLEELTFEELKQQSGGKGGGGFLPAVKQIANVAALPGIVKVE 52
            +V G FY ND LE+L F+ELK  +G +G GGFLP VKQIANVAALPGIV V 
Sbjct:   34 KVEGIFYINDLLEKLMFDELKHWAGTQGIGGFLPGVKQIANVAALPGIVGVR 85          
BLAST of mRNA_L-elsbetiae_contig8181.17178.1 vs. uniprot
Match: A0A0B7ASC0_9EUPU (RNA-splicing ligase RtcB homolog n=6 Tax=Gastropoda TaxID=6448 RepID=A0A0B7ASC0_9EUPU)

HSP 1 Score: 76.3 bits (186), Expect = 6.740e-15
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    1 QVPGYFYANDRLEELTFEELKQQSGGKGGGGFLPAVKQIANVAALPGIVK 50
            +V GYFY ND LE+L F+ELKQ    KG GGFLP +KQIANVAALPGIV 
Sbjct:   30 KVDGYFYVNDNLEKLMFDELKQSCNSKGFGGFLPGIKQIANVAALPGIVS 79          
BLAST of mRNA_L-elsbetiae_contig8181.17178.1 vs. uniprot
Match: A0A8D0NZK9_PIG (Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D0NZK9_PIG)

HSP 1 Score: 71.6 bits (174), Expect = 7.160e-15
Identity = 35/52 (67.31%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 QVPGYFYANDRLEELTFEELKQQSGGKGGGGFLPAVKQIANVAALPGIVKVE 52
            QV G FY ND LE+L FEEL+    G G GGFLPA+KQI NVAALPGIV V 
Sbjct:   31 QVEGVFYVNDALEKLMFEELRNACRGGGVGGFLPAMKQIGNVAALPGIVHVS 82          
BLAST of mRNA_L-elsbetiae_contig8181.17178.1 vs. uniprot
Match: UPI001EE53F97 (RNA-splicing ligase RtcB homolog n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE53F97)

HSP 1 Score: 75.5 bits (184), Expect = 1.260e-14
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    1 QVPGYFYANDRLEELTFEELKQQSGGKGGGGFLPAVKQIANVAALPGIVK 50
            +V GYFY NDRLE+L F+ELK     KG GGFLP +KQIANVAALPGIV 
Sbjct:   30 KVDGYFYTNDRLEKLMFDELKHSCNSKGFGGFLPGMKQIANVAALPGIVS 79          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8181.17178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS68_ECTSI1.600e-2392.00RNA-splicing ligase RtcB homolog n=2 Tax=Ectocarpu... [more]
A0A2C9KM53_BIOGL6.720e-1671.43Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
A0A7S1GE03_9STRA1.940e-1574.00RNA-splicing ligase RtcB homolog n=1 Tax=Bicosoeci... [more]
A0A8C4S595_ERPCA2.640e-1573.47RNA-splicing ligase RtcB homolog n=2 Tax=Polypteri... [more]
UPI00077AE1573.390e-1567.31tRNA-splicing ligase RtcB homolog n=1 Tax=Acropora... [more]
UPI00155F371B6.530e-1572.00tRNA-splicing ligase RtcB homolog n=1 Tax=Etheosto... [more]
UPI000C04ECA26.590e-1567.31tRNA-splicing ligase RtcB homolog n=1 Tax=Stylopho... [more]
A0A0B7ASC0_9EUPU6.740e-1570.00RNA-splicing ligase RtcB homolog n=6 Tax=Gastropod... [more]
A0A8D0NZK9_PIG7.160e-1567.31Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9... [more]
UPI001EE53F971.260e-1470.00RNA-splicing ligase RtcB homolog n=1 Tax=Haliotis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8181contigL-elsbetiae_contig8181:4947..5105 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8181.17178.1mRNA_L-elsbetiae_contig8181.17178.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8181 4947..5105 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8181.17178.1 ID=prot_L-elsbetiae_contig8181.17178.1|Name=mRNA_L-elsbetiae_contig8181.17178.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=53bp
QVPGYFYANDRLEELTFEELKQQSGGKGGGGFLPAVKQIANVAALPGIVK
VE*
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