prot_L-elsbetiae_contig818.17175.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig818.17175.1
Unique Nameprot_L-elsbetiae_contig818.17175.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length223
Homology
BLAST of mRNA_L-elsbetiae_contig818.17175.1 vs. uniprot
Match: D7FSQ2_ECTSI (RNA_pol_Rbc25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ2_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 1.480e-91
Identity = 157/190 (82.63%), Postives = 164/190 (86.32%), Query Frame = 0
Query:    2 VAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSACSKQGIKVSLDFFEKASIPKDLLQSPSVFTRGEWLWSYPDPDAEEGXXXXXXXXXXGENGGGAEGGEEAFSLALHDEVRFRVRTLEFTQVTSTAAGRLQATTVSTARGGGG 191
            VAPSKFSGDALDVLTAQIEAKFADRVIANVGLC+CLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEIL GKVS+C+KQGIKVSLDFFE ASIPKDLLQSPSVF RGEW+WS         XXXXXXXXXX       E  +++FSL LHDEVRFRVRTLEFTQVTSTA G LQATTVSTARG  G
Sbjct:   30 VAPSKFSGDALDVLTAQIEAKFADRVIANVGLCICLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILTGKVSSCTKQGIKVSLDFFENASIPKDLLQSPSVFARGEWMWSXXXXXXXXXXXXXXXXXXXXXXXXXXEN-DDSFSLTLHDEVRFRVRTLEFTQVTSTATGSLQATTVSTARGAAG 218          
BLAST of mRNA_L-elsbetiae_contig818.17175.1 vs. uniprot
Match: A0A835YK61_9STRA (RNA polymerase III subunit Rpc25-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK61_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.160e-52
Identity = 93/193 (48.19%), Postives = 126/193 (65.28%), Query Frame = 0
Query:    1 QVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSACSKQGIKVSLDFFEKASIPKDLLQSPSVFTRGE--WLWSYPDPDAEEGXXXXXXXXXXGENGGGAEGGEEAFSLALHDEVRFRVRTLEFTQVTSTAAGRLQATTVSTARGGGG 191
            +V P  F    LDVLT  ++ K++++VI NVGL +CLHS+ES+GD  VYPSDG+AHY+  FR+L+FRPFVGE+L GK+  CS+ GI VS+ FFE  +IPK LL  PSV+ +    W+W Y D DA+                      ++++ + + DE+RFRVRTL+FT+V +TA G  QATTVST   GGG
Sbjct:   12 KVIPESFDRPTLDVLTEVVDMKYSNKVIINVGLAICLHSFESVGDALVYPSDGSAHYEAEFRLLMFRPFVGEVLTGKIGRCSETGITVSIGFFEDITIPKPLLCHPSVYHKRHKAWVWKYSDADADAADFNP----------------DDSYIMQVGDEIRFRVRTLDFTEVVNTANG-YQATTVSTGPQGGG 187          
BLAST of mRNA_L-elsbetiae_contig818.17175.1 vs. uniprot
Match: A0A6V1SWR7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SWR7_HETAK)

HSP 1 Score: 161 bits (408), Expect = 1.330e-46
Identity = 89/190 (46.84%), Postives = 118/190 (62.11%), Query Frame = 0
Query:    1 QVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSACSKQGIKVSLDFFEKASIPKDLLQSPSVFTRGE--WLWSYPDPDAEEGXXXXXXXXXXGENGGGAEGGEEAFSLALHDEVRFRVRTLEFTQVTSTAAGRLQATTVSTARG 188
            ++ PS F  + +  LT +I+ K+A++VI +VGLC+CL  +E IGD Y+YP DG+AHYK  FR+LVFRPFVGEI+ G++S+ SK+GIKVSL F +   +P  LLQ+PS F   E  W W Y D D E                       +   + + D  RFRVRTL+FTQV +TA G LQA TVST+ G
Sbjct:   12 KIHPSAFDKNQIQALTEEIDHKYANKVILDVGLCICLFDFEHIGDAYIYPLDGSAHYKATFRLLVFRPFVGEIITGRISSQSKEGIKVSLGFTDDIIVPSYLLQAPSQFDPEERAWTWKYQDEDGEA----------------------QDMLMEVGDACRFRVRTLDFTQVKATAKG-LQAHTVSTSVG 178          
BLAST of mRNA_L-elsbetiae_contig818.17175.1 vs. uniprot
Match: A0A067CHA1_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHA1_SAPPC)

HSP 1 Score: 150 bits (380), Expect = 5.460e-42
Identity = 78/186 (41.94%), Postives = 116/186 (62.37%), Query Frame = 0
Query:    1 QVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSACSKQGIKVSLDFFEKASIPKDLLQSPSVFTRGEWLWSYPDPDAEEGXXXXXXXXXXGENGGGAEGGEEAFSLALHDEVRFRVRTLEFTQVTSTAAGRLQATTVSTA 186
            Q+AP  F  D   VLT +I+ K+A++VIA+VGLC+ L+ +  IGD Y++PSDG +H +V FRM+VF+PF+GE+L GK+ +C+++ I+VS+DF +   IP   +Q+PS F + E LW +  P                    G E  ++ + + LH+EVRFRV  + FT+VT TA G +QAT    A
Sbjct:   12 QIAPELFGTDYSSVLTEEIDRKYANKVIADVGLCITLYDFIEIGDAYIHPSDGTSHTEVVFRMVVFQPFIGEVLKGKIISCTEEHIRVSMDFVQDIIIPSYAMQTPSFFDKNERLWEWKFP--------------------GKEDEQDPYYMYLHEEVRFRVTNINFTRVTKTAKG-IQATVTEAA 176          
BLAST of mRNA_L-elsbetiae_contig818.17175.1 vs. uniprot
Match: A0A7S3H250_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H250_9STRA)

HSP 1 Score: 150 bits (379), Expect = 7.930e-42
Identity = 81/192 (42.19%), Postives = 114/192 (59.38%), Query Frame = 0
Query:    1 QVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSACSKQGIKVSLDFFEKASIPKDLLQSPSVFTR--GEWLWSYPDPDAEEGXXXXXXXXXXGENGGGAEGGEEAFSLALHDEVRFRVRTLEFTQVTSTAAGRLQATTVSTARGGG 190
            + AP +F  DA +VL  QIE K+A+RV+ +VGLC+  + + SIGDPY+YPS+G+A   VRFRM+VFRPFVGEI+ G++ +  ++G+K+S +FFE   IP  LLQ+P V+    G W W Y +P                         E  F + + +EVRF+VRTL FTQ++S+  G    TT  T    G
Sbjct:    5 KTAPDQFGRDAAEVLKEQIEIKYANRVLLHVGLCITFYDFISIGDPYLYPSEGSAIQIVRFRMVVFRPFVGEIITGRLVSSGREGLKISTEFFEDILIPAALLQAPCVYNPVDGLWTWKYGEP-------------------------ENDFLMDIGEEVRFKVRTLTFTQLSSSVKGLTATTTSETGNDAG 171          
BLAST of mRNA_L-elsbetiae_contig818.17175.1 vs. uniprot
Match: M4BL76_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BL76_HYAAE)

HSP 1 Score: 148 bits (373), Expect = 2.430e-41
Identity = 78/179 (43.58%), Postives = 106/179 (59.22%), Query Frame = 0
Query:    2 VAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSACSKQGIKVSLDFFEKASIPKDLLQSPSVFTRGE--WLWSYPDPDAEEGXXXXXXXXXXGENGGGAEGGEEAFSLALHDEVRFRVRTLEFTQVTSTAAGRL 178
            VAPS F  D   VL  +I+ K+A++VIA+VGLCV L+ +  IGD +V+PSDG +H  V FRM+VFRPFVGE+L G++  C+ + I+VS+DF +   IP   LQ+PS +   E  W+W Y D   E                       E F + LH+E+RFRV  + FT+VT TA G L
Sbjct:   13 VAPSLFDADYTQVLIEEIDRKYANKVIADVGLCVTLYDFVRIGDAFVHPSDGTSHSHVEFRMIVFRPFVGEVLKGRIVGCTDEHIRVSMDFVQDIIIPSYALQTPSYYDTAEKLWVWKYSDGQGEGVPQTWSRCLAV-----------EKFYMDLHEEIRFRVTNINFTRVTKTAKGEL 180          
BLAST of mRNA_L-elsbetiae_contig818.17175.1 vs. uniprot
Match: A0A8K1CBB5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBB5_PYTOL)

HSP 1 Score: 147 bits (370), Expect = 2.170e-40
Identity = 77/183 (42.08%), Postives = 114/183 (62.30%), Query Frame = 0
Query:    2 VAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSACSKQGIKVSLDFFEKASIPKDLLQSPSVFTRGE--WLWSYPDPDAEEGXXXXXXXXXXGENGGGAEGGEEAFSLALHDEVRFRVRTLEFTQVTSTAAGRLQATT 182
            VAP  F  D   VL  +I+ K+A++VIA+VGLC+ ++ +  IGD +V+PSDG +H +V FRM+VFRPFVGE+L G++ +C+++ I+VS+DF +   IP   +Q+PS F   E  W+W Y +                         G+E F + LH+E+RFRV ++ FT+VT TA G +QATT
Sbjct:   13 VAPDLFEEDYQKVLVEEIDRKYANKVIADVGLCISIYDFVHIGDAFVHPSDGTSHSQVEFRMVVFRPFVGEVLKGRIVSCNEEHIRVSMDFVQDIIIPSYAMQTPSYFDTTERLWVWKYSE-------------------------GQEKFFMDLHEEIRFRVTSINFTRVTKTAHG-IQATT 169          
BLAST of mRNA_L-elsbetiae_contig818.17175.1 vs. uniprot
Match: K3WAI2_GLOUD (Uncharacterized protein n=21 Tax=Oomycota TaxID=4762 RepID=K3WAI2_GLOUD)

HSP 1 Score: 146 bits (368), Expect = 3.660e-40
Identity = 76/183 (41.53%), Postives = 112/183 (61.20%), Query Frame = 0
Query:    2 VAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSACSKQGIKVSLDFFEKASIPKDLLQSPSVFTRGE--WLWSYPDPDAEEGXXXXXXXXXXGENGGGAEGGEEAFSLALHDEVRFRVRTLEFTQVTSTAAGRLQATT 182
            V P  F  D   VL  +I+ K+A++VIA+VGLC+ ++ +  IGD +V+PSDG +H +V FRM+VFRPFVGE+L G++ +C+++ I+VS+DF +   IP   LQ+PS F   E  W+W Y +                         G+E F + +H+E+RFRV  + FT+VT TA G +QATT
Sbjct:   13 VNPELFDADYTKVLVEEIDRKYANKVIADVGLCITIYDFVHIGDAFVHPSDGTSHSQVEFRMVVFRPFVGEVLKGRIVSCTEEHIRVSMDFVQDIIIPSYALQTPSYFDTAERLWVWKYSE-------------------------GQEKFYMDMHEEIRFRVTNINFTRVTKTANG-IQATT 169          
BLAST of mRNA_L-elsbetiae_contig818.17175.1 vs. uniprot
Match: A0A6G0XPV7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPV7_9STRA)

HSP 1 Score: 145 bits (367), Expect = 5.620e-40
Identity = 76/182 (41.76%), Postives = 114/182 (62.64%), Query Frame = 0
Query:    1 QVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSACSKQGIKVSLDFFEKASIPKDLLQSPSVFTRGEWLWSYPDPDAEEGXXXXXXXXXXGENGGGAEGGEEAFSLALHDEVRFRVRTLEFTQVTSTAAGRLQATT 182
            QVAP  F+ D   VL  +I+ K+A++VIA+VGLC+  + +  IGD Y++PSDG +H +V FRM+VFRPF+GEIL GK+ +C+++ I+VS+DF +   IP   +Q+PS F + E LW +  P  EEG                    ++ + + L++E+RFRV  + FT+V  TA G +QA T
Sbjct:   12 QVAPEFFAADYSSVLIEEIDRKYANKVIADVGLCITHYDFIEIGDAYIHPSDGTSHTEVIFRMVVFRPFIGEILKGKIISCTEEHIRVSMDFVQDIIIPSYAMQNPSFFDKTERLWEWKFPGREEG--------------------QDPYYMYLNEEIRFRVTNINFTRVLKTATG-IQAVT 172          
BLAST of mRNA_L-elsbetiae_contig818.17175.1 vs. uniprot
Match: A0A1V9Z282_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z282_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.000e-39
Identity = 78/181 (43.09%), Postives = 116/181 (64.09%), Query Frame = 0
Query:    1 QVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSACSKQGIKVSLDFFEKASIPKDLLQSPSVFTRGEWLWSYPDPDAEEGXXXXXXXXXXGENGGGAEGGEEAFSLALHDEVRFRVRTLEFTQVTSTAAGRLQAT 181
            Q+AP  FS D   VLT +I+ K+A++VIA+VGLC+ L+ +  IGD Y++PSDG +H +V FRM+VFRPF+GE+L GK+ +C+++ I+VS+DF +   IP   +Q+PS F + E LW +  P  E G                    ++ + + LH+E+RFRV  + FT+VT TA G +QAT
Sbjct:   12 QIAPELFSTDYSSVLTEEIDRKYANKVIADVGLCITLYDFIEIGDAYIHPSDGTSHTEVIFRMVVFRPFIGEVLKGKIISCTEEHIRVSMDFVQDIIIPSYAMQTPSFFDKNERLWEWKFPSKEPG--------------------QDPYYMYLHEEIRFRVTNINFTRVTKTANG-IQAT 171          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig818.17175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSQ2_ECTSI1.480e-9182.63RNA_pol_Rbc25 domain-containing protein n=1 Tax=Ec... [more]
A0A835YK61_9STRA1.160e-5248.19RNA polymerase III subunit Rpc25-domain-containing... [more]
A0A6V1SWR7_HETAK1.330e-4646.84Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A067CHA1_SAPPC5.460e-4241.94Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A7S3H250_9STRA7.930e-4242.19Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
M4BL76_HYAAE2.430e-4143.58Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A8K1CBB5_PYTOL2.170e-4042.08Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WAI2_GLOUD3.660e-4041.53Uncharacterized protein n=21 Tax=Oomycota TaxID=47... [more]
A0A6G0XPV7_9STRA5.620e-4041.76Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9Z282_9STRA2.000e-3943.09Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 69..192
e-value: 8.0E-17
score: 63.9
NoneNo IPR availablePANTHERPTHR12709DNA-DIRECTED RNA POLYMERASE II, IIIcoord: 1..174
NoneNo IPR availablePANTHERPTHR12709:SF1DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC8coord: 1..174
IPR013238RNA polymerase III, subunit Rpc25PFAMPF08292RNA_pol_Rbc25coord: 68..181
e-value: 4.8E-18
score: 65.6
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilyGENE3D3.30.1490.120coord: 1..68
e-value: 7.7E-22
score: 79.0
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilySUPERFAMILY88798N-terminal, heterodimerisation domain of RBP7 (RpoE)coord: 2..67
IPR005576RNA polymerase Rpb7-like , N-terminalPFAMPF03876SHS2_Rpb7-Ncoord: 1..66
e-value: 3.0E-13
score: 49.9
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 68..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig818contigL-elsbetiae_contig818:2119..7007 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig818.17175.1mRNA_L-elsbetiae_contig818.17175.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig818 2119..7007 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig818.17175.1 ID=prot_L-elsbetiae_contig818.17175.1|Name=mRNA_L-elsbetiae_contig818.17175.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=223bp
QVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYP
SDGAAHYKVRFRMLVFRPFVGEILAGKVSACSKQGIKVSLDFFEKASIPK
DLLQSPSVFTRGEWLWSYPDPDAEEGEEGEGKGGAGGENGGGAEGGEEAF
SLALHDEVRFRVRTLEFTQVTSTAAGRLQATTVSTARGGGGAAGGATGGG
VGGRGREGGGAAGSGAEPPIMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013238RNA_pol_III_Rbc25
IPR036898RNA_pol_Rpb7-like_N_sf
IPR005576Rpb7-like_N
IPR012340NA-bd_OB-fold