prot_L-elsbetiae_contig817.17165.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig817.17165.1
Unique Nameprot_L-elsbetiae_contig817.17165.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length111
Homology
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BLAST of mRNA_L-elsbetiae_contig817.17165.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 3.680e-14
Identity = 45/104 (43.27%), Postives = 62/104 (59.62%), Query Frame = 0 
Query:    4 YRNRFKSWSYKFLNRHRFSIHRRTSVGQKKPYGWESKAWAFIMKLRPLLLRHAKEAILVEKAAAAAKGGGTVEIDVEGTPATAEELFAIQGKIFEMLYNMDQTP 107
            ++++FKSW  +F  R++FSI RRTSVGQK P G E  AWA +MKLR  LL  A E  +  +    A G    E  + G   ++ +L  +  ++FE L NMDQTP
Sbjct:  176 FKSKFKSWYQRFRKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGE--IYAQRYPPAPG----ESPIRGEDLSSSQLELVTDELFEELGNMDQTP 273
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BLAST of mRNA_L-elsbetiae_contig817.17165.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 7.180e-14
Identity = 45/102 (44.12%), Postives = 60/102 (58.82%), Query Frame = 0 
Query:    6 NRFKSWSYKFLNRHRFSIHRRTSVGQKKPYGWESKAWAFIMKLRPLLLRHAKEAILVEKAAAAAKGGGTVEIDVEGTPATAEELFAIQGKIFEMLYNMDQTP 107
            ++FKSW  +F  R++FSI RRTSVGQK P G E  AWA +MKLR  LL  A E  +  +    A G    E  + G   ++ +L  +  ++FE L NMDQTP
Sbjct:  183 SKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGE--IYAQRYPPAPG----ESPIRGEDLSSSQLELVTDELFEELGNMDQTP 278
[Close]
BLAST of mRNA_L-elsbetiae_contig817.17165.1 vs. uniprot
Match: A0A6H5K4S0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S0_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.070e-13
Identity = 47/123 (38.21%), Postives = 64/123 (52.03%), Query Frame = 0 
Query:    4 YRNRFKSWSYKFLNRHRFSIHRRTSVGQKKPYGWESKAWAFIMKLRPLLLRHAKEAI--------LVEKAA-----------AAAKGGGTVEIDVEGTPATAEELFAIQGKIFEMLYNMDQTP 107
            ++++FKSW  +F  R++FSI RRTSVGQK P G ES AWA +MKLR  LLR   E I        +V +             A     G     + G   ++ +L  +  ++FE L NMDQTP
Sbjct:  169 FKSKFKSWYQRFRKRNKFSIRRRTSVGQKLPKGHESMAWATLMKLRKALLRGGPEFISPGVGDRRIVRRTGQHGPDASPARDAGGDDSGKDRXPIRGEDLSSSQLELVTDELFEELGNMDQTP 291
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig817.17165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KYG9_9PHAE3.680e-1443.27DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE7.180e-1444.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4S0_9PHAE1.070e-1338.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig817contigL-elsbetiae_contig817:6767..7099 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig817.17165.1mRNA_L-elsbetiae_contig817.17165.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig817 5878..7099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig817.17165.1 ID=prot_L-elsbetiae_contig817.17165.1|Name=mRNA_L-elsbetiae_contig817.17165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp
VDKYRNRFKSWSYKFLNRHRFSIHRRTSVGQKKPYGWESKAWAFIMKLRP
LLLRHAKEAILVEKAAAAAKGGGTVEIDVEGTPATAEELFAIQGKIFEML
YNMDQTPNPG*
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