prot_L-elsbetiae_contig8161.17159.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8161.17159.1
Unique Nameprot_L-elsbetiae_contig8161.17159.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length206
Homology
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BLAST of mRNA_L-elsbetiae_contig8161.17159.1 vs. uniprot
Match: A0A836C9E1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9E1_9STRA)

HSP 1 Score: 125 bits (313), Expect = 6.260e-31
Identity = 67/160 (41.88%), Postives = 90/160 (56.25%), Query Frame = 0 
Query:   55 LRVALLLLLRSAPASAMVDLTLYGGVFDSSSIIAYAEVAQT-CFGGLEVGTCKPSSPNWLIDFLDQYNE-GVSGAYCAACCSNTDVSG----------DTWTFTCPLVSIAFAEFVNHFGWEFRFGRRETPDDKEVITCPIPRKECFYDEDGVLSAPCES 202
            +RVA  L  R A ++A  D+ +YGG FD+   ++Y +V+   CFGGL++GTCKP S  WL D++ +YN    +G YC +CCSN+   G          DTW  TC L S    +FVN FG+EF F R     D +++ C IPR  C Y  DG L   C S
Sbjct:    6 IRVANFLAARIAESAAN-DVQIYGGYFDARFAVSYTDVSSKGCFGGLDLGTCKPPSDLWLQDWMAEYNSISAAGTYCLSCCSNSAPYGGTNANPEEEADTWDLTCQLASTTQKKFVNVFGYEFIFLRNSHNGDLDLVRCQIPRTACTYKSDGNLEGTCVS 164
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8161.17159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836C9E1_9STRA6.260e-3141.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8161contigL-elsbetiae_contig8161:4989..7026 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8161.17159.1mRNA_L-elsbetiae_contig8161.17159.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8161 4989..7026 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8161.17159.1 ID=prot_L-elsbetiae_contig8161.17159.1|Name=mRNA_L-elsbetiae_contig8161.17159.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=206bp
ALGVPRRCSPLRQNAGESRWALTCDESIRSRRHAPVTFGLQAAMRMIRPM
VAVWLRVALLLLLRSAPASAMVDLTLYGGVFDSSSIIAYAEVAQTCFGGL
EVGTCKPSSPNWLIDFLDQYNEGVSGAYCAACCSNTDVSGDTWTFTCPLV
SIAFAEFVNHFGWEFRFGRRETPDDKEVITCPIPRKECFYDEDGVLSAPC
ESGAR*
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