prot_L-elsbetiae_contig8148.17146.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8148.17146.1
Unique Nameprot_L-elsbetiae_contig8148.17146.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length164
Homology
BLAST of mRNA_L-elsbetiae_contig8148.17146.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 5.570e-35
Identity = 74/147 (50.34%), Postives = 96/147 (65.31%), Query Frame = 0
Query:    1 MQDAGMAMMESFGADVRNNVFENCRFGIRFSVGCANNLIENNEFSSMSQYGIYTYQGSDLPAVNDSPDADGRPKNNVFNKNVISNV--TIGVHINEGDNNEFTENVFTAVQRFNVEDGVGNLFMNNTVFTACLEAGTGAALGNIPRC 145
            MQDAGMAMMES+ A++ +N F NCR+GIR S+G   N+I NN FS ++QYG+YTY GSD P V   P+++GRP +NVF+ N I      IGVHI EGD+N F +NVFT V  +  ED     +++NT    CL+  T  A G I  C
Sbjct:  490 MQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDV---PNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNTG-GGCLDGSTDFAEGGITEC 632          
BLAST of mRNA_L-elsbetiae_contig8148.17146.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 4.830e-32
Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 0
Query:    7 AMMESFGADVRNNVFENCRFGIRFSVGCANNLIENNEFSSMSQYGIYTYQGSDLPAVNDSPDADGRPKNNVFNKNVISNVTIGVHINEGDNNEFTENVFTAVQRFNVEDGVGNLFMNNTVFTACLEAGTGAALGNIPRC 145
            A+MESF A++ +N  ENC++GIR S+G A+N I +N F S S YG+YTY+GSD P V+ +   DGR K+N F+ N ISN  + + I EGD+N FT NVF  V+ F  ED    ++ NN +   CL+  T  A G+IP C
Sbjct:  710 ALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGN---DGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDIGGGCLDESTDFASGSIPSC 845          
BLAST of mRNA_L-elsbetiae_contig8148.17146.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 9.820e-28
Identity = 57/132 (43.18%), Postives = 80/132 (60.61%), Query Frame = 0
Query:    1 MQDAGMAMMESFGADVRNNVFENCRFGIRFSVGCANNLIENNEFSSMSQYGIYTYQGSDLPAVNDSPDADGRPKNNVFNKNVISNVTIGVHINEGDNNEFTENVFTAVQRFNVEDGVGNLFMNNTVFTACLE 132
            MQDAG+AM+ESF A +  N+    ++GIR S+G  NN +  N F+ +SQYG+YTY+GSD P V     +DGRP  NV   N++ +  IGV I EGD+NEF +N F  V  F   +    ++  N +   C+E
Sbjct:  742 MQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDV-----SDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDGCIE 868          
BLAST of mRNA_L-elsbetiae_contig8148.17146.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.290e-25
Identity = 62/141 (43.97%), Postives = 83/141 (58.87%), Query Frame = 0
Query:    7 AMMESFGADVRNNVFENCRFGIRFSVGCANNLIENNEFSSMSQYGIYTYQGSDLPAVNDSPDADGRPKNNVFNKNVISNVTIGVHINEGDNNEFTENVFTAVQRFNVEDGVGNLFMNNTVFTACLEAGTGAALGN--IPRC 145
            A +ESF AD+ +N   NC++GIR S+G  +N I NN F ++S+YG+YTY+GSD P V     ++GRPK N F  N +SN  IGV   EGD+N F  NVFT V  F  E      +  N++   CL+ G     G+  IP C
Sbjct:  544 AFLESFDADIYDNRIVNCKYGIRLSLGSGDNDITNNTFDNISKYGLYTYKGSDSPDV-----SNGRPKGNKFEGNTVSNTKIGVLGKEGDDNIFKNNVFTNVDTFEFEKSKDTEWTGNSLGGGCLDRGKDFTKGSDTIPDC 679          
BLAST of mRNA_L-elsbetiae_contig8148.17146.1 vs. uniprot
Match: A0A6H5JTN9_9PHAE (MEP5b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTN9_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.590e-25
Identity = 59/129 (45.74%), Postives = 78/129 (60.47%), Query Frame = 0
Query:    3 DAGMAMMESFGADVRNNVFENCRFGIRFSVGCANNLIENNEFSSMSQYGIYTYQGSDLPAVNDSPDADGRPKNNVFNKNVISNVTIGVHINEGDNNEFTENVFTA------VQRFNVEDGVGNLFMNNT 125
            DAG+AM+ESF ADV +N FEN ++G+RFSVGCA+N+   N  S+ S+Y  Y+Y GSD P V  S    GR +NNVF++N  +     + I E D  +F +NVF        V RF  +D  GNL   NT
Sbjct:   41 DAGLAMLESFNADVSDNTFENNKYGVRFSVGCADNVFSENTISNNSKYNAYSYLGSDEPDVVSS----GRSQNNVFSQNSFAGAAETIKIKEADGTQFLDNVFEVGDADGLVVRF--DDATGNLMKGNT 163          
BLAST of mRNA_L-elsbetiae_contig8148.17146.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 2.050e-24
Identity = 57/138 (41.30%), Postives = 81/138 (58.70%), Query Frame = 0
Query:    3 DAGMAMMESFGADVRNNVFENCRFGIRFSVGCANNLIENNEFSSMSQYGIYTYQGSDLPAVNDSPDADGRPKNNVFNKNVISNVTIGVHINEGDNNEFTENVFTAVQRFNVEDGVGNLFMNNT-VFTACLEAGTGAAL 139
            DAGMA+MESF ADV NN FE+ ++G+R SVGCA+N+   N  S  S+Y +YTY+GSD P V DS    GR ++N+F+ N I+     + +   D  EF +N F + +    ED    +   NT + +A L+   GA  
Sbjct:  180 DAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDS----GRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTGLGSATLKVSKGACF 313          
BLAST of mRNA_L-elsbetiae_contig8148.17146.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 3.250e-23
Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 0
Query:    3 DAGMAMMESFGADVRNNVFENCRFGIRFSVGCANNLIENNEFSSMSQYGIYTYQGSDLPAVNDSPDADGRPKNNVFNKNVISNVTIGVHINEGDNNEFTENVFTAVQRFNVEDGVGNLFMNNT-VFTACLEAGTGAAL 139
            DAGMA+MESF ADV NN FE+ ++G+R SVGCA+N+   N  S  S+Y +YTY+GSD P V DS    GR ++N+F+ N I+     + +   D  EF +N F   +    ED    L   NT + +A L+   GA  
Sbjct:  357 DAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDS----GRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACF 490          
BLAST of mRNA_L-elsbetiae_contig8148.17146.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 6.320e-23
Identity = 68/159 (42.77%), Postives = 90/159 (56.60%), Query Frame = 0
Query:    3 DAGMAMMESFGADVRNNVFENCRFGIRFSVGCANNLIENNEFSSMSQYGIYTYQGSDLPAVNDSPDADGRPKNNVFNKNVISNVTIGVHINEGDNNEFTENVFTA------VQRFNVEDGVGNLFMNNTVFTACLEAGTGAALGNIPRC-DGEADSGEE 154
            DAG+AM+ESF ADV  N FEN ++G+RFSVGCA+N+  NN  S+ ++Y  Y+Y G+D P V  S    GR +NNVF++N  S     + I E D  +F +NVF        V RF  ++   NL   NT     L+ G      +   C DGEADSG E
Sbjct:  357 DAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSS----GRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRF--DNATENLMQGNTG----LDDGEFELKVDNDACFDGEADSGYE 505          
BLAST of mRNA_L-elsbetiae_contig8148.17146.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 5.890e-22
Identity = 65/159 (40.88%), Postives = 87/159 (54.72%), Query Frame = 0
Query:    3 DAGMAMMESFGADVRNNVFENCRFGIRFSVGCANNLIENNEFSSMSQYGIYTYQGSDLPAVNDSPDADGRPKNNVFNKNVISNVTIGVHINEGDNNEFTENVFTAVQRFNVEDGVGNLFMNNTVFTACLEAGTGAALGNIP------RC-DGEADSGEE 154
            DAG+AM+ESF ADV  N FEN ++G+R SVGCA+N+   N  S+ S+Y  YTY GSD P V  S    GR +NNVF++N  S     + I E D  +F +NVF       V D  G +   +    + ++  TG   G+         C DGE+DSG E
Sbjct:  361 DAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSS----GRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFE------VGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYE 509          
BLAST of mRNA_L-elsbetiae_contig8148.17146.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.150e-20
Identity = 54/147 (36.73%), Postives = 77/147 (52.38%), Query Frame = 0
Query:    1 MQDAGMAMMESFGADVRNNVFENCRFGIRFSVGCANNLIENNEFSSMSQYGIYTYQGSDLPAVNDSPDADGRPKNNVFNKNVISNVTIGVHINEGDNNEFTENVFTAVQRFNVEDGVGNLFMNNTVFTACLEAGTGAALGNIPRCDG 147
            M DAG+A++ESF AD+ +N  +  +FGIR S+G   N + +NEF+  S +G+YTY GSD P V     ++GRP  N FN N ++N   GV     DN   T N FT  +     D     +  N++        +G  + NI   DG
Sbjct:  312 MPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDV-----SNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSL-------PSGVCIDNITSDDG 446          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8148.17146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8D9_ECTSI5.570e-3550.34Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FWE8_ECTSI4.830e-3247.48Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LC73_ECTSI9.820e-2843.18Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D8LRN0_ECTSI1.290e-2543.97Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JTN9_9PHAE2.590e-2545.74MEP5b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
Q7XAJ9_9PHAE2.050e-2441.30Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
Q7XAK2_9PHAE3.250e-2342.03Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
D7G339_ECTSI6.320e-2342.77Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI5.890e-2240.88Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JGU8_9PHAE1.150e-2036.73MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 34..56
e-value: 4.5
score: 16.3
coord: 11..32
e-value: 36.0
score: 13.2
coord: 73..94
e-value: 510.0
score: 9.3
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 2..152
e-value: 3.9E-10
score: 41.3
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 3..125
e-value: 1.1E-11
score: 44.8
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 4..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8148contigL-elsbetiae_contig8148:5708..6763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8148.17146.1mRNA_L-elsbetiae_contig8148.17146.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8148 5690..8158 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8148.17146.1 ID=prot_L-elsbetiae_contig8148.17146.1|Name=mRNA_L-elsbetiae_contig8148.17146.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=164bp
MQDAGMAMMESFGADVRNNVFENCRFGIRFSVGCANNLIENNEFSSMSQY
GIYTYQGSDLPAVNDSPDADGRPKNNVFNKNVISNVTIGVHINEGDNNEF
TENVFTAVQRFNVEDGVGNLFMNNTVFTACLEAGTGAALGNIPRCDGEAD
SGEEDDDLGGSEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR011050Pectin_lyase_fold/virulence