prot_L-elsbetiae_contig813.17127.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig813.17127.1
Unique Nameprot_L-elsbetiae_contig813.17127.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length243
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig813.17127.1 vs. uniprot
Match: D8LKA3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKA3_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 5.760e-84
Identity = 180/263 (68.44%), Postives = 191/263 (72.62%), Query Frame = 0 
Query:    1 MGEFGSNRAAWLIAGFLGRKFMKASDLLGRWSVLPVLAVACCVWNKWKASQLEGKLEQAKLEEVRRSTRRQLHILRKKSAAGAQPLDSTQRR--------------PGDRLGGIPSSSLSTTPKQXXXXXXXXXXXXXXXXXXXXXTSVAAP----APKDALASELWAWLGGVGSGR-SCSADRPK-RPSQRSGG-------GSEWRGAFYNRMGNVPRRNAFKTARGKVYLRGGRKGAGGSSGGGAEAPPIGGLAPVREEDE 236
            MGEFGSNRAAWLIAGFLGRKFMK  D LGRWSV+PVLAVA C+WNKW+A QLEGKLEQ KLEEVRRSTRRQL +LR                              PGDRLGGIPS+S+ST    XXXXXXXXXXXXXXXXXXXXX          APKDALASELWAWLGGVGSGR SCSADRPK   S RSG          EWRGAFYNRMGN+PRRNAFKTARGKVYLRGGR G+GG+  G  +APP+GGLA VREEDE
Sbjct:    1 MGEFGSNRAAWLIAGFLGRKFMK--DFLGRWSVIPVLAVAACLWNKWRARQLEGKLEQCKLEEVRRSTRRQLQLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDRLGGIPSASISTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPKDALASELWAWLGGVGSGRRSCSADRPKCSSSPRSGXXXXXXXXSGEWRGAFYNRMGNLPRRNAFKTARGKVYLRGGRIGSGGTREG-VQAPPLGGLASVREEDE 260
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig813.17127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKA3_ECTSI5.760e-8468.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig813contigL-elsbetiae_contig813:28796..31452 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig813.17127.1mRNA_L-elsbetiae_contig813.17127.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig813 28796..31452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig813.17127.1 ID=prot_L-elsbetiae_contig813.17127.1|Name=mRNA_L-elsbetiae_contig813.17127.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp
MGEFGSNRAAWLIAGFLGRKFMKASDLLGRWSVLPVLAVACCVWNKWKAS
QLEGKLEQAKLEEVRRSTRRQLHILRKKSAAGAQPLDSTQRRPGDRLGGI
PSSSLSTTPKQQQEQRQHLSPTAAAAAAANGSTSVAAPAPKDALASELWA
WLGGVGSGRSCSADRPKRPSQRSGGGSEWRGAFYNRMGNVPRRNAFKTAR
GKVYLRGGRKGAGGSSGGGAEAPPIGGLAPVREEDEAGIVAG*
back to top