prot_L-elsbetiae_contig8129.17124.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8129.17124.1
Unique Nameprot_L-elsbetiae_contig8129.17124.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length98
Homology
BLAST of mRNA_L-elsbetiae_contig8129.17124.1 vs. uniprot
Match: D7G7K6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7K6_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 1.760e-31
Identity = 82/161 (50.93%), Postives = 86/161 (53.42%), Query Frame = 0
Query:    1 MAPRPTGLLRPAVHHFPTIK-----------------------------------------EESFTTNVARLKEYRANLIIFPRGSKHLPKNGDSPLEEQAAATQ----------------------EMSGANLHSERRIARNEHKLSGIRIRQKE-KTKK 97
            MAPRPT LLRPAVH  PTIK                                         EESF  NVARLKEYRANLIIFPRGSKHLPK GDS LEEQ AATQ                      EM+  +LHSERR+ARNE KL+GIRIRQKE KTKK
Sbjct:   45 MAPRPTQLLRPAVH-CPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDSSLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSLHSERRVARNEFKLAGIRIRQKEEKTKK 204          
BLAST of mRNA_L-elsbetiae_contig8129.17124.1 vs. uniprot
Match: A0A4S2N1Z8_9PEZI (60S ribosomal protein L13 n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2N1Z8_9PEZI)

HSP 1 Score: 55.1 bits (131), Expect = 5.890e-7
Identity = 31/54 (57.41%), Postives = 33/54 (61.11%), Query Frame = 0
Query:   11 PAVHHFPTIKEESFTTNVARLKEYRANLIIFPRGSKHLPKNGDSPLEEQAAATQ 64
            P  H      EES   NVARLKEYR+NLIIFPR +K  PK GDS  EE   A Q
Sbjct:   96 PVDHRRRNTSEESLQINVARLKEYRSNLIIFPRKAK-APKKGDSSAEEIKEARQ 148          
BLAST of mRNA_L-elsbetiae_contig8129.17124.1 vs. uniprot
Match: A0A7S4PSP4_9DINO (60S ribosomal protein L13 (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PSP4_9DINO)

HSP 1 Score: 53.9 bits (128), Expect = 7.960e-7
Identity = 30/54 (55.56%), Postives = 34/54 (62.96%), Query Frame = 0
Query:   12 AVHHFPTIKE-ESFTTNVARLKEYRANLIIFPRGSKHLPKNGDSPLEEQAAATQ 64
            AV H  T K  E+   NVARL EY+A LI+FPR S   PK GDS   E +AATQ
Sbjct:   74 AVDHRRTNKSVEAMQANVARLNEYKAKLIVFPRKSNQKPKKGDSSPAETSAATQ 127          
BLAST of mRNA_L-elsbetiae_contig8129.17124.1 vs. uniprot
Match: A0A7S2UYA0_9STRA (60S ribosomal protein L13 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYA0_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.490e-6
Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 0
Query:   12 AVHHFPTIKE-ESFTTNVARLKEYRANLIIFPRGSKHLPKNGDSPLEEQAAATQ 64
            AV H  T K  E+   N+ARL E++A L++FPR S   PKNGDS  EE + ATQ
Sbjct:   96 AVDHRRTNKSVEAMQANIARLAEFKARLVVFPRKSNQKPKNGDSAPEETSQATQ 149          
BLAST of mRNA_L-elsbetiae_contig8129.17124.1 vs. uniprot
Match: A0A170QYQ1_9ASCO (60S ribosomal protein L13 n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A170QYQ1_9ASCO)

HSP 1 Score: 53.5 bits (127), Expect = 2.240e-6
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0
Query:   22 ESFTTNVARLKEYRANLIIFPRGSKHLPKNGDSPLEEQAAATQEMSGA 69
            E F TNV RLKEY+A LI+FPR +   PK+GD+  EE AAA Q++S A
Sbjct:  107 EGFETNVNRLKEYKAKLIVFPRKAGK-PKSGDASAEEIAAAKQQLSVA 153          
BLAST of mRNA_L-elsbetiae_contig8129.17124.1 vs. uniprot
Match: A0A6V2FIA8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2FIA8_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 3.020e-6
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0
Query:   21 EESFTTNVARLKEYRANLIIFPRGSKHLPKNGDSPLEEQAAATQEMSGANL 71
            EES   NVARL EY+A L++FPR   + PK GD+ +E+  AATQ +SG  L
Sbjct:  111 EESLAANVARLTEYKAKLVVFPRKRLNKPKAGDASIEDIKAATQ-LSGTVL 160          
BLAST of mRNA_L-elsbetiae_contig8129.17124.1 vs. uniprot
Match: UPI0007381FDD (60S ribosomal protein L13 n=2 Tax=Opiinae TaxID=68883 RepID=UPI0007381FDD)

HSP 1 Score: 51.6 bits (122), Expect = 1.210e-5
Identity = 26/43 (60.47%), Postives = 30/43 (69.77%), Query Frame = 0
Query:   22 ESFTTNVARLKEYRANLIIFPRGSKHLPKNGDSPLEEQAAATQ 64
            ES  TNV RL+EY+ANLI+FP+  K  PK GDS  EE   ATQ
Sbjct:  106 ESLQTNVQRLREYKANLILFPKNEKK-PKKGDSTAEECKMATQ 147          
BLAST of mRNA_L-elsbetiae_contig8129.17124.1 vs. uniprot
Match: A0A1E3QDI2_LIPST (60S ribosomal protein L13 n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3QDI2_LIPST)

HSP 1 Score: 51.2 bits (121), Expect = 1.580e-5
Identity = 34/69 (49.28%), Postives = 39/69 (56.52%), Query Frame = 0
Query:   22 ESFTTNVARLKEYRANLIIFPRGSKHLPKNGDSPLEEQAAATQEMSGA-------NLHSERRIARNEHK 83
            E    NVARLKEY+A LI+FPR +   PK GDS + E AAATQ  + A        L SE RI   E K
Sbjct:  107 EGLEANVARLKEYQAKLILFPRKAGK-PKKGDSEVSELAAATQVSTAAVLPIGQPALESEPRIVTEEGK 174          
BLAST of mRNA_L-elsbetiae_contig8129.17124.1 vs. uniprot
Match: A0A2V0PGT2_9CHLO (60S ribosomal protein L13 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PGT2_9CHLO)

HSP 1 Score: 50.8 bits (120), Expect = 2.180e-5
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:   22 ESFTTNVARLKEYRANLIIFPRGSKHLPKNGDSPLEEQAAATQEMSGANL 71
            E    NVARLK YR+NL+IFPR +K  PK  ++  E+ AAA Q++ GA L
Sbjct:  107 EGLQANVARLKAYRSNLVIFPRDAKK-PKKFEASKEDAAAAAQQVKGAVL 155          
BLAST of mRNA_L-elsbetiae_contig8129.17124.1 vs. uniprot
Match: A0A1E4TAK8_9ASCO (60S ribosomal protein L13 n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4TAK8_9ASCO)

HSP 1 Score: 50.8 bits (120), Expect = 2.210e-5
Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 0
Query:   22 ESFTTNVARLKEYRANLIIFPRGSKHLPKNGDSPLEEQAAATQEMS 67
            E F  NVARLKEY++ L++FPR S    K+GDS  EE AAA+Q +S
Sbjct:  107 EGFEANVARLKEYKSKLVVFPRKSGK-SKSGDSSAEEVAAASQTIS 151          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8129.17124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7G7K6_ECTSI1.760e-3150.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4S2N1Z8_9PEZI5.890e-757.4160S ribosomal protein L13 n=1 Tax=Ascodesmis nigri... [more]
A0A7S4PSP4_9DINO7.960e-755.5660S ribosomal protein L13 (Fragment) n=1 Tax=Alexa... [more]
A0A7S2UYA0_9STRA1.490e-651.8560S ribosomal protein L13 n=1 Tax=Fibrocapsa japon... [more]
A0A170QYQ1_9ASCO2.240e-658.3360S ribosomal protein L13 n=1 Tax=Sugiyamaella lig... [more]
A0A6V2FIA8_9STRA3.020e-652.94Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
UPI0007381FDD1.210e-560.4760S ribosomal protein L13 n=2 Tax=Opiinae TaxID=68... [more]
A0A1E3QDI2_LIPST1.580e-549.2860S ribosomal protein L13 n=1 Tax=Lipomyces starke... [more]
A0A2V0PGT2_9CHLO2.180e-552.0060S ribosomal protein L13 n=1 Tax=Raphidocelis sub... [more]
A0A1E4TAK8_9ASCO2.210e-556.5260S ribosomal protein L13 n=1 Tax=Tortispora casei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001380Ribosomal protein L13ePFAMPF01294Ribosomal_L13ecoord: 20..79
e-value: 1.4E-10
score: 41.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8129contigL-elsbetiae_contig8129:4514..7583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8129.17124.1mRNA_L-elsbetiae_contig8129.17124.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8129 4514..7695 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8129.17124.1 ID=prot_L-elsbetiae_contig8129.17124.1|Name=mRNA_L-elsbetiae_contig8129.17124.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=98bp
MAPRPTGLLRPAVHHFPTIKEESFTTNVARLKEYRANLIIFPRGSKHLPK
NGDSPLEEQAAATQEMSGANLHSERRIARNEHKLSGIRIRQKEKTKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001380Ribosomal_L13e