prot_L-elsbetiae_contig8127.17123.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8127.17123.1
Unique Nameprot_L-elsbetiae_contig8127.17123.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length135
Homology
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BLAST of mRNA_L-elsbetiae_contig8127.17123.1 vs. uniprot
Match: D7G7K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K0_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 1.430e-35
Identity = 93/145 (64.14%), Postives = 98/145 (67.59%), Query Frame = 0 
Query:    1 MAAWARAPPHRG--LTGVKNVVVRERRAAXXXXXXXXXXXXXXXXXXX--------GTVAVVTRDLPPKAYLDLSVCVERPRFQYSPAHAFALADMAKAMKLLLPPNLFPQVASGRRGAVVEAAQGQGQGHPVAVPPLAWWDAGR 135
            M A ARAPPH G  LTGVK VV+ ER A XXXXXXXXXX                 G VAVVTRDLPPK YLDLSVCVERPRF++SPAH +ALAD+A A  LLLPPNLFPQVA G RG         G G  V VPPLAWWDAGR
Sbjct: 2028 MVACARAPPHSGGSLTGVKVVVIDEREAXXXXXXXXXXXRGRQHAAPSEVAGGGGRGKVAVVTRDLPPKVYLDLSVCVERPRFEFSPAHTYALADLASAATLLLPPNLFPQVAPGSRGT--------GTGRDV-VPPLAWWDAGR 2163
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8127.17123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7K0_ECTSI1.430e-3564.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8127contigL-elsbetiae_contig8127:5259..8240 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8127.17123.1mRNA_L-elsbetiae_contig8127.17123.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8127 5238..8240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8127.17123.1 ID=prot_L-elsbetiae_contig8127.17123.1|Name=mRNA_L-elsbetiae_contig8127.17123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=135bp
MAAWARAPPHRGLTGVKNVVVRERRAAAAAPAPASASASASAAGGAGTVA
VVTRDLPPKAYLDLSVCVERPRFQYSPAHAFALADMAKAMKLLLPPNLFP
QVASGRRGAVVEAAQGQGQGHPVAVPPLAWWDAGR
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