prot_L-elsbetiae_contig8121.17119.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8121.17119.1
Unique Nameprot_L-elsbetiae_contig8121.17119.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length39
Homology
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: D7FM82_ECTSI (Succinate dehydrogenase assembly factor 4, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM82_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 6.880e-22
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0
Query:    1 MLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 38
            MLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF
Sbjct:   94 MLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 131          
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A7S1U9V4_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9V4_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 8.580e-17
Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 0
Query:    1 MLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 38
            M+ +GPAGKEWGGP RGG L EPTRFGDWERKGRC+DF
Sbjct:  102 MILDGPAGKEWGGPRRGGKLAEPTRFGDWERKGRCTDF 139          
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: G4Z764_PHYSP (Succinate dehydrogenase assembly factor 4, mitochondrial (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z764_PHYSP)

HSP 1 Score: 70.5 bits (171), Expect = 5.760e-15
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 MLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 38
            M+  GP+G E+GGPTRGG L EPTRFGDWERKGRCSDF
Sbjct:   48 MVAIGPSGAEYGGPTRGGKLKEPTRFGDWERKGRCSDF 85          
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: H3GEL2_PHYRM (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GEL2_PHYRM)

HSP 1 Score: 70.5 bits (171), Expect = 8.450e-15
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 MLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 38
            M+  GP+G E+GGPTRGG L EPTRFGDWERKGRCSDF
Sbjct:   63 MVAVGPSGVEYGGPTRGGKLKEPTRFGDWERKGRCSDF 100          
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A2P4YG81_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YG81_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.000e-14
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 MLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 38
            M+  GP+G E+GGPTRGG L EPTRFGDWERKGRCSDF
Sbjct:   56 MVAIGPSGVEYGGPTRGGKLKEPTRFGDWERKGRCSDF 93          
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A225W1X5_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W1X5_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.080e-14
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 MLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 38
            M+  GP+G E+GGPTRGG L EPTRFGDWERKGRCSDF
Sbjct:   59 MVAIGPSGVEYGGPTRGGKLKEPTRFGDWERKGRCSDF 96          
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A6A3LCQ3_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LCQ3_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.260e-14
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 MLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 38
            M+  GP+G E+GGPTRGG L EPTRFGDWERKGRCSDF
Sbjct:   79 MVAIGPSGAEYGGPTRGGKLKEPTRFGDWERKGRCSDF 116          
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A1V9ZNK1_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZNK1_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 4.290e-14
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 38
            M+  GPAG EWGGP+RGG   EPTRFGDWE+KGRC DF
Sbjct:   58 MVTIGPAGTEWGGPSRGGKYKEPTRFGDWEKKGRCMDF 95          
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: W2PMR2_PHYPN (Succinate dehydrogenase assembly factor 4, mitochondrial n=8 Tax=Phytophthora TaxID=4783 RepID=W2PMR2_PHYPN)

HSP 1 Score: 68.9 bits (167), Expect = 5.610e-14
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    5 GPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 38
            GP+G E+GGPTRGG L EPTRFGDWERKGRCSDF
Sbjct:   87 GPSGAEYGGPTRGGKLKEPTRFGDWERKGRCSDF 120          
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A024U2R8_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2R8_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 5.930e-14
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    1 MLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 38
            M+  GPAG EWGGP RGG   EPTRFGDWE+KGRC DF
Sbjct:   57 MVMIGPAGTEWGGPQRGGKYKEPTRFGDWEKKGRCCDF 94          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM82_ECTSI6.880e-22100.00Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A7S1U9V4_9STRA8.580e-1781.58Succinate dehydrogenase assembly factor 4, mitocho... [more]
G4Z764_PHYSP5.760e-1578.95Succinate dehydrogenase assembly factor 4, mitocho... [more]
H3GEL2_PHYRM8.450e-1578.95Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A2P4YG81_9STRA1.000e-1478.95Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A225W1X5_9STRA1.080e-1478.95Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A6A3LCQ3_9STRA1.260e-1478.95Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A1V9ZNK1_9STRA4.290e-1473.68Succinate dehydrogenase assembly factor 4, mitocho... [more]
W2PMR2_PHYPN5.610e-1485.29Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A024U2R8_9STRA5.930e-1473.68Succinate dehydrogenase assembly factor 4, mitocho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012875Succinate dehydrogenase assembly factor 4PFAMPF07896DUF1674coord: 6..38
e-value: 1.6E-8
score: 34.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8121contigL-elsbetiae_contig8121:7056..7172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8121.17119.1mRNA_L-elsbetiae_contig8121.17119.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8121 7056..7199 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8121.17119.1 ID=prot_L-elsbetiae_contig8121.17119.1|Name=mRNA_L-elsbetiae_contig8121.17119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=39bp
MLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012875SDHF4