mRNA_L-elsbetiae_contig8121.17119.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: D7FM82_ECTSI (Succinate dehydrogenase assembly factor 4, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM82_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 5.390e-24 Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 1 Query: 13 EEIEEMLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 141 EE+EEMLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF Sbjct: 89 EEMEEMLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 131
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A7S1U9V4_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9V4_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.760e-18 Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 1 Query: 10 EEEIEEMLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 141 EE+ EEM+ +GPAGKEWGGP RGG L EPTRFGDWERKGRC+DF Sbjct: 96 EEDWEEMILDGPAGKEWGGPRRGGKLAEPTRFGDWERKGRCTDF 139
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A024U2R8_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2R8_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 2.280e-16 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 1 Query: 4 DEEEEIEEMLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 141 D+EE++E+M+ GPAG EWGGP RGG EPTRFGDWE+KGRC DF Sbjct: 49 DDEEDMEDMVMIGPAGTEWGGPQRGGKYKEPTRFGDWEKKGRCCDF 94
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A6G0WXB9_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXB9_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 4.710e-16 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 1 Query: 4 DEEEEIEEMLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 141 D+EE++E+M+ GPAG EWGGP RGG EPTRFGDWE+KGRC DF Sbjct: 50 DDEEDMEDMVVIGPAGTEWGGPQRGGKYKEPTRFGDWEKKGRCCDF 95
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: W4GYH8_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GYH8_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 5.870e-16 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 1 Query: 4 DEEEEIEEMLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 141 D+EE++E+M+ GPAG EWGGP RGG EPTRFGDWE+KGRC DF Sbjct: 45 DDEEDMEDMVVIGPAGVEWGGPQRGGKYKEPTRFGDWEKKGRCCDF 90
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A225W1X5_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W1X5_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 6.860e-16 Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = 1 Query: 4 DEEEEIEEMLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 141 DE+++ E+M+ GP+G E+GGPTRGG L EPTRFGDWERKGRCSDF Sbjct: 51 DEDDDGEDMVAIGPSGVEYGGPTRGGKLKEPTRFGDWERKGRCSDF 96
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A6A3LCQ3_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LCQ3_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.140e-15 Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 1 Query: 19 IEEMLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 141 +E+M+ GP+G E+GGPTRGG L EPTRFGDWERKGRCSDF Sbjct: 76 VEDMVAIGPSGAEYGGPTRGGKLKEPTRFGDWERKGRCSDF 116
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A7S3GRS8_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GRS8_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.470e-15 Identity = 33/42 (78.57%), Postives = 34/42 (80.95%), Query Frame = 1 Query: 16 EIEEMLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 141 E+EEM EGPAG EW GPTRGG EPTRFGDWERKGR SDF Sbjct: 71 EMEEMFIEGPAGLEWNGPTRGGKRPEPTRFGDWERKGRASDF 112
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A835YQ12_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ12_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 3.490e-15 Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 1 Query: 7 EEEEIEEMLQEGPAGK-EWGGPTRGGVLGEPTRFGDWERKGRCSDF 141 EEE++E+M GP G E+GGPTRGG L EPTRFGDWERKGRC+DF Sbjct: 4 EEEDMEQMFVPGPDGSMEYGGPTRGGKLAEPTRFGDWERKGRCTDF 49
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Match: A0A2P4YG81_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YG81_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 3.660e-15 Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 1 Query: 19 IEEMLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 141 E+M+ GP+G E+GGPTRGG L EPTRFGDWERKGRCSDF Sbjct: 53 XEDMVAIGPSGVEYGGPTRGGKLKEPTRFGDWERKGRCSDF 93 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8121.17119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8121.17119.1 >prot_L-elsbetiae_contig8121.17119.1 ID=prot_L-elsbetiae_contig8121.17119.1|Name=mRNA_L-elsbetiae_contig8121.17119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=39bp MLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF*back to top mRNA from alignment at L-elsbetiae_contig8121:7056..7199- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8121.17119.1 ID=mRNA_L-elsbetiae_contig8121.17119.1|Name=mRNA_L-elsbetiae_contig8121.17119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=144bp|location=Sequence derived from alignment at L-elsbetiae_contig8121:7056..7199- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8121:7056..7199- >mRNA_L-elsbetiae_contig8121.17119.1 ID=mRNA_L-elsbetiae_contig8121.17119.1|Name=mRNA_L-elsbetiae_contig8121.17119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=234bp|location=Sequence derived from alignment at L-elsbetiae_contig8121:7056..7199- (Laminarionema elsbetiae ELsaHSoW15)back to top |