prot_L-elsbetiae_contig8120.17118.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig8120.17118.1
Unique Name	prot_L-elsbetiae_contig8120.17118.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	140

Homology

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BLAST of mRNA_L-elsbetiae_contig8120.17118.1 vs. uniprot
Match: D7FP96_ECTSI (R3H domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP96_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 2.780e-25
Identity = 79/141 (56.03%), Postives = 88/141 (62.41%), Query Frame = 0

Query:    1 MPETLRSALASRPTVEVEAGKP------AEAGA--TLLVPLGPSPFHRLLLHALCQYRRLRSRSEETSRGRVVRVTVPTPR----------TASAVPDARLTDFVLETRLR---ATVAGSGGDAGTGGPRVSQASPHVAAA 120
            MP  LRSALAS P VEV           AEAGA  TLLVPLGPSPFHRLLLHALCQY++LRS+SEET RGR+VRV +PT            TA A P+A LT+FVL TRL+         G   G G  R+SQASP  A A
Sbjct:  285 MPSALRSALASPPKVEVRKXXXXXXXXXAEAGAGPTLLVPLGPSPFHRLLLHALCQYQKLRSKSEETKRGRIVRVMIPTSXXXXXXXXXSGTAFAAPNAPLTEFVLRTRLQDYDRLREREGAARGEG--RLSQASPSSAGA 423

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig8120.17118.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig8120.17118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FP96_ECTSI	2.780e-25	56.03	R3H domain-containing protein n=2 Tax=Ectocarpus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001374	R3H domain	PROSITE	PS51061	R3H	coord: 5..71 score: 9.362
IPR036867	R3H domain superfamily	SUPERFAMILY	82708	R3H domain	coord: 35..89

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig8120	contig	L-elsbetiae_contig8120:5465..6614 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig8120.17118.1	mRNA_L-elsbetiae_contig8120.17118.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig8120 3966..7820 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig8120.17118.1 ID=prot_L-elsbetiae_contig8120.17118.1|Name=mRNA_L-elsbetiae_contig8120.17118.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp
MPETLRSALASRPTVEVEAGKPAEAGATLLVPLGPSPFHRLLLHALCQYR
RLRSRSEETSRGRVVRVTVPTPRTASAVPDARLTDFVLETRLRATVAGSG
GDAGTGGPRVSQASPHVAAATRCGQENPAGTSTAITGVA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001374	R3H_dom
IPR036867	R3H_dom_sf