prot_L-elsbetiae_contig812.17117.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig812.17117.1
Unique Nameprot_L-elsbetiae_contig812.17117.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length404
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig812.17117.1 vs. uniprot
Match: D8LBM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBM1_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 7.910e-107
Identity = 183/323 (56.66%), Postives = 222/323 (68.73%), Query Frame = 0 
Query:   83 AIAVVGLTA-LPAKGRGVLVNCLGFWLPAVATIGDTEKGVDLPHNPSVYTGYWVIFGLFTLLDVILPAVTPCYFFTKACVLTWAASSARPYGGRAVIDRAFKIINNRDEHERTPLKEVIMATRALGPSEDIAAQAGVSRRAFRLAIVVAAVAFRILALGIVSSLMLAMEGLFAGLPTWIQARVCVIAGACWPLYATLLARARS--AAAAEGLGDDKDGRNRRLGPAAVQWLSYWPMYALFLAVVDPIIGCVPHFYSFKLVVLAFLALPQTRGAYLITSLVLYAEDVDT-GSTGSLVDKCRSAQSSPPEKWEEQKTSCSTPVVV 401
            A A +GL A LP KGRGVLVN  GF LPA++ IG+ +   D   N  ++TGYWV+FGLF LLD +LPA+TPCYF TKACVL WA SSARPYGGR V++RAF I ++ D   +       M  +AL P E++A + G+SR+AFRLA ++  V    + LGI    +L +EGL+AGL T  QARVCV+AGACWPLYATL+ RARS  AA A+G G  +    +R GPAAVQWLSYWPM+ALFLA++DP +G +PHFYSFK+V LAFLALPQTRGAY+ITSLVLY  D  T GS G      R  Q        E K SC  P VV
Sbjct:    5 AFAALGLVAALPTKGRGVLVNFGGFLLPALSNIGEIDTKAD---NKPLFTGYWVVFGLFFLLDGVLPAITPCYFSTKACVLIWAFSSARPYGGRPVLNRAFDINDSNDSDHKDA-----MVIKALRPWEEVATEKGISRKAFRLAAIIFTVTAGTVVLGICYFFVLTVEGLYAGLSTSTQARVCVLAGACWPLYATLVGRARSEAAAVAKGSGGTEGAEKKRQGPAAVQWLSYWPMFALFLAILDPAMGWLPHFYSFKMVALAFLALPQTRGAYVITSLVLYGNDRGTVGSGGGDEASFRGGQG-------EHKVSCGAPAVV 312
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig812.17117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBM1_ECTSI7.910e-10756.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004345TB2/DP1/HVA22-related proteinPFAMPF03134TB2_DP1_HVA22coord: 306..355
e-value: 1.6E-8
score: 34.4
IPR004345TB2/DP1/HVA22-related proteinPANTHERPTHR12300HVA22-LIKE PROTEINScoord: 308..357
NoneNo IPR availablePANTHERPTHR12300:SF130PROTEIN YOP1coord: 308..357
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 249..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 225..248
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 320..324
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 260..280
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 347..403
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 301..319
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 325..346
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 281..300
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 95..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 157..224
NoneNo IPR availableTMHMMTMhelixcoord: 338..360
NoneNo IPR availableTMHMMTMhelixcoord: 309..328
NoneNo IPR availableTMHMMTMhelixcoord: 257..279
NoneNo IPR availableTMHMMTMhelixcoord: 225..247
NoneNo IPR availableTMHMMTMhelixcoord: 76..94
NoneNo IPR availableTMHMMTMhelixcoord: 134..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig812contigL-elsbetiae_contig812:24909..26764 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig812.17117.1mRNA_L-elsbetiae_contig812.17117.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig812 24909..26764 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig812.17117.1 ID=prot_L-elsbetiae_contig812.17117.1|Name=mRNA_L-elsbetiae_contig812.17117.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=404bp
ELHSGVSLRVKSMTLDSPTHRSPPLPTPPPPPTRGRGTIPEEDEIWNAER
IHRMATETLLWCTEQYKRSRSNHVRVWYAMAGAIAVVGLTALPAKGRGVL
VNCLGFWLPAVATIGDTEKGVDLPHNPSVYTGYWVIFGLFTLLDVILPAV
TPCYFFTKACVLTWAASSARPYGGRAVIDRAFKIINNRDEHERTPLKEVI
MATRALGPSEDIAAQAGVSRRAFRLAIVVAAVAFRILALGIVSSLMLAME
GLFAGLPTWIQARVCVIAGACWPLYATLLARARSAAAAEGLGDDKDGRNR
RLGPAAVQWLSYWPMYALFLAVVDPIIGCVPHFYSFKLVVLAFLALPQTR
GAYLITSLVLYAEDVDTGSTGSLVDKCRSAQSSPPEKWEEQKTSCSTPVV
VPM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004345TB2_DP1_HVA22