prot_L-elsbetiae_contig812.17115.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig812.17115.1
Unique Nameprot_L-elsbetiae_contig812.17115.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length303
Homology
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BLAST of mRNA_L-elsbetiae_contig812.17115.1 vs. uniprot
Match: A0A6H5JA62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA62_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.380e-22
Identity = 51/91 (56.04%), Postives = 58/91 (63.74%), Query Frame = 0 
Query:   49 PGVFNYPGSAWGGSFCSIHKE--------------DDMVDSTPKSCESVGCKYAANFGDTTQRTRRFCARHKLGGMLSYQELWPRPEDKTT 125
            PG FNYPG   GGSFC  HKE              + MVD+TP  CE+ GC Y+A+FGD  QRTRRFCARHKL GMLSYQELW    D ++
Sbjct:  278 PGAFNYPGVTRGGSFCDDHKEVYTLYFLVCSSVWQEGMVDNTPTQCEAEGCNYSASFGDMGQRTRRFCARHKLAGMLSYQELWATQTDASS 368
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BLAST of mRNA_L-elsbetiae_contig812.17115.1 vs. uniprot
Match: D8LBM0_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBM0_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.620e-11
Identity = 37/76 (48.68%), Postives = 41/76 (53.95%), Query Frame = 0 
Query:   50 GVFNYPGSAWGGSFCSIHKEDDMVDSTPKSCESVGCKYAANFGDTTQRTRRFCARHKLGGMLSYQELWPRPEDKTT 125
            G FNYPG   GGSF                       Y+A+FGD  QRTRRFCARHKL GMLSYQELW    D ++
Sbjct:  208 GAFNYPGVTRGGSFXXXXXXXXXXXXXXXXXXXXXXSYSASFGDMGQRTRRFCARHKLAGMLSYQELWATQTDASS 283
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig812.17115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JA62_9PHAE1.380e-2256.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBM0_ECTSI1.620e-1148.68EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig812contigL-elsbetiae_contig812:21080..23418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig812.17115.1mRNA_L-elsbetiae_contig812.17115.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig812 21080..23420 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig812.17115.1 ID=prot_L-elsbetiae_contig812.17115.1|Name=mRNA_L-elsbetiae_contig812.17115.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=303bp
TKTCKHPGCDKIPSYGYPCKSREFCKPHAPEGMIYSAGSRCRFRGCGLPG
VFNYPGSAWGGSFCSIHKEDDMVDSTPKSCESVGCKYAANFGDTTQRTRR
FCARHKLGGMLSYQELWPRPEDKTTNVTPLPTNAEKAFAADLAAAAAPVS
MTFGSGQPRKITSSNAAEPAKRPRTHDIPSPGGQLATAPGPSTSQRPEGR
GLVGAEQLNLPANASTPASDGMLPPPPRLVASVPGTGGPAAPASSGMHLD
FLADAAASATLGGHPAEDLHQTPAAVDGLPGSQASAIQAPVGSSSQGVSG
AAT
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