prot_L-elsbetiae_contig8119.17109.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8119.17109.1
Unique Nameprot_L-elsbetiae_contig8119.17109.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length327
Homology
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: D7FTQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ5_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 2.070e-77
Identity = 157/301 (52.16%), Postives = 185/301 (61.46%), Query Frame = 0
Query:   61 MWRWFTYDDDDIENDDAKGDTEGXXXXXXXXXXX---------------------DVAATLDVVVPAVTAAILAQAAFRGYRLRERLRRLPAREAEKQIKALHRNARGFRRVGLFLAFAGLYFALVFYGVDVSFERSVQQSLTDHLELVHYGPDSDKTHRDVNSLADLHQWMQAFYVKTYSGTQVEHPCMACAVKPPDDVCDGCDFNLYDAQTADDDVHDDADDGGST-------------NGRRRRLTSSDRDSXXXXXXXXXXXXSFSGRHGLSKECGACVVGRLCTGKYLEICEAALG 327
            MWRWFTY+++    +++K D                                   DVA T D + P+VTAAILAQAAFRGYRLRERLRRLPAREAEK I  L+ NARGFRRVGLFL F+GLYFALVFYGVDVSF+RSVQQ+L DH+  V YGPD DKTH DV SLAD+HQW+QAF++KTY GTQ+EHPC  CA+KPPDDVCD CDF       A+D     AD+ GS              NGRR+             XXXXXXXX  S   G+S+EC  C++   C G  L+ C+  LG
Sbjct:    1 MWRWFTYEEE-YPGEESKHDPNNVLALQTSSNSGRLSAQAPHGDSSSNSGIDSDSDVAPTFDKLDPSVTAAILAQAAFRGYRLRERLRRLPAREAEKHILGLYNNARGFRRVGLFLLFSGLYFALVFYGVDVSFQRSVQQALRDHVAGVKYGPDLDKTHHDVASLADVHQWVQAFFLKTYDGTQLEHPCTPCAIKPPDDVCDACDFTPLYEMFANDSDSSAADNVGSQGEPSPGDGVAAAWNGRRKVAXXX--------XXXXXXXXXXSTSFGISEECVQCLIALNCVGDLLQNCQEVLG 292          
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: A0A6H5L8A4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8A4_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 2.530e-76
Identity = 126/172 (73.26%), Postives = 140/172 (81.40%), Query Frame = 0
Query:   95 DVAATLDVVVPAVTAAILAQAAFRGYRLRERLRRLPAREAEKQIKALHRNARGFRRVGLFLAFAGLYFALVFYGVDVSFERSVQQSLTDHLELVHYGPDSDKTHRDVNSLADLHQWMQAFYVKTYSGTQVEHPCMACAVKPPDDVCDGCDFNLYDAQTADDDVHDDADDGGS 266
            DVA T D + P+VTAAILAQAAFRGYRLRERLRRLPAREAEKQI  LH NARGFRRVGLFL F+GLYFALVFYGVDV+F+RSVQQ+L DH+  V YGPD DKTH DV SLAD+HQW+QAF++KTY GTQ+EHPC  CA+KPPDDVCD CDF       A+D     ADD GS
Sbjct:   12 DVAPTYDKLDPSVTAAILAQAAFRGYRLRERLRRLPAREAEKQILGLHSNARGFRRVGLFLLFSGLYFALVFYGVDVAFQRSVQQALRDHVAGVKYGPDLDKTHHDVASLADVHQWVQAFFLKTYDGTQLEHPCTPCAIKPPDDVCDACDFTPLIEMFANDSDSSAADDVGS 183          
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: A0A6H5KUB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUB6_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 9.120e-55
Identity = 111/174 (63.79%), Postives = 125/174 (71.84%), Query Frame = 0
Query:   61 MWRWFTYDDDDIENDDAKGDTE----------------------GXXXXXXXXXXXDVAATLDVVVPAVTAAILAQAAFRGYRLRERLRRLPAREAEKQIKALHRNARGFRRVGLFLAFAGLYFALVFYGVDVSFERSVQQSLTDHLELVHYGPDSDKTHRDVNSLADLHQWMQ 212
            MWRWFTY+++    +++K D                        G    XXXXXXXDVA T D + P+VTAAILAQAAFRGYRLRERLRRLPAREAEK I  LH NARGFRRVGLFL F+GLYFALVFYGVDVSF+RSVQQ+L DH+  V YGPD DKTH DV SLAD+HQW+Q
Sbjct:    1 MWRWFTYEEE-YPGEESKHDPNHVLVRQTSTSTGGRLSAQAPHGGSSSNXXXXXXXDVAPTFDKLDPSVTAAILAQAAFRGYRLRERLRRLPAREAEKHILGLHNNARGFRRVGLFLLFSGLYFALVFYGVDVSFQRSVQQALRDHVAGVKYGPDLDKTHHDVASLADVHQWVQ 173          
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: D7FTQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ4_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 3.850e-48
Identity = 99/170 (58.24%), Postives = 114/170 (67.06%), Query Frame = 0
Query:   61 MWRWFTYDDDDIENDDAKGDTEGXXXXXXXXXXX------------------DVAATLDVVVPAVTAAILAQAAFRGYRLRERLRRLPAREAEKQIKALHRNARGFRRVGLFLAFAGLYFALVFYGVDVSFERSVQQSLTDHLELVHYGPDSDKTHRDVNSLADLHQWMQ 212
            MWRWFTY+++    +++K D                                DVA T D + P+VTAAILAQAAFRGYRLRERLRRLPAREAEK I  LH NARGFRRVGLFL F+GLYF LVFYGVDV+F+RSVQQ+L DH+  V YGPD DKTH DV SL D+H W+Q
Sbjct:    1 MWRWFTYEEE-YPGEESKHDPNNVLARQTSSSSGRLSAKSPHGSNGGTDSDSDVAPTFDNLDPSVTAAILAQAAFRGYRLRERLRRLPAREAEKHILGLHNNARGFRRVGLFLLFSGLYFTLVFYGVDVAFQRSVQQALRDHVAGVKYGPDLDKTHHDVASLGDVHDWIQ 169          
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: A0A6H5JJW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJW1_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 2.050e-22
Identity = 74/166 (44.58%), Postives = 89/166 (53.61%), Query Frame = 0
Query:   61 MWRWFTYDDD----DIENDD-----------------AKGDTEGXXXXXXXXXXXDVAATLDVVVPAVT--------------AAILAQAAFRGYRLRERLRRLPAREAEKQIKALHRNARGFRRVGLFLAFAGLYFALVFYGVDVSFERSVQQSLTDHLELVHYG 191
            MWRWFTY+++    + ++D                  AK    G           DVA TLD  +  +T              AA++A  AFRGY LRERLRRLPARE EK I  LH NA GFRRVGLFL F+GLYF LVFY   V+F+ SVQQ+L DH+  V  G
Sbjct:    1 MWRWFTYEEEYPGAESKHDSNHVVARQPSSSSRGRLSAKSPHSGSNDGTEGDS--DVAPTLDTWIHLLTGGMGDYVRQSSGGPAALVA--AFRGYHLRERLRRLPAREVEKHILGLHNNASGFRRVGLFLLFSGLYFTLVFY---VAFQPSVQQALRDHVAAVSLG 159          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FTQ5_ECTSI2.070e-7752.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8A4_9PHAE2.530e-7673.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUB6_9PHAE9.120e-5563.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTQ4_ECTSI3.850e-4858.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJW1_9PHAE2.050e-2244.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..150
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 170..327
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..169
NoneNo IPR availableTMHMMTMhelixcoord: 151..173
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 106..135
score: 8.352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8119contigL-elsbetiae_contig8119:1817..4877 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8119.17109.1mRNA_L-elsbetiae_contig8119.17109.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8119 41..4877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8119.17109.1 ID=prot_L-elsbetiae_contig8119.17109.1|Name=mRNA_L-elsbetiae_contig8119.17109.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=327bp
MYCRKLWRFGALVTPPPETSQKQFWVCRVGSSFVCPCLHPLILTFADRFC
FLRVESPAAGMWRWFTYDDDDIENDDAKGDTEGGTSQQEEEQEQDVAATL
DVVVPAVTAAILAQAAFRGYRLRERLRRLPAREAEKQIKALHRNARGFRR
VGLFLAFAGLYFALVFYGVDVSFERSVQQSLTDHLELVHYGPDSDKTHRD
VNSLADLHQWMQAFYVKTYSGTQVEHPCMACAVKPPDDVCDGCDFNLYDA
QTADDDVHDDADDGGSTNGRRRRLTSSDRDSDFDSGSESSSSSSFSGRHG
LSKECGACVVGRLCTGKYLEICEAALG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS