mRNA_L-elsbetiae_contig8119.17109.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8119.17109.1
Unique NamemRNA_L-elsbetiae_contig8119.17109.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: A0A6H5KGF6_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF6_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 7.260e-85
Identity = 147/234 (62.82%), Postives = 170/234 (72.65%), Query Frame = -3
Query:  476 MHYRRRVDRRLNVRLLQAEVMETLLYGCASLSLSADH*TKLNGTHRQFLTRYIGWSKRKRTGHPL*YAQALL*TGCEETIEATLRKRRLCFAGFVMRMEDDRLPKRVLLGTMSGGKGYQGGQERDWVSHIGEDLVAFGMEDEKEGAKWQKSALEPEEWFSKIVDVVARFMRRWHAREIEASAKRQLDREVKATXXXXXXXXXXXXXXXXXXXXXXXXXT-AAAGRAAEAVLVAN 1174
            M+ RRR +R+L +RLLQAEV+ETLLYGCAS SL+A+H TKLNGTHRQFLTR IGWSKRKR+  PL YAQAL+  GCEETIEAT+RKRRLCFAGFVMRMED RLPK +LLG M+GG GY+GGQE DWVS +GEDLVAF M DEKEG KW++SA +PE W++K+ DV   FMR+WH +E E SAK Q  RE +A                          T   A RAAEA LVAN
Sbjct:    1 MYDRRRANRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKHMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKDPEVWYNKVEDVATWFMRKWHRQEAETSAKHQRAREAEAESTVISGPKRKRGGEAAVGGKKRRPGTNVEASRAAEAALVAN 234          
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: A0A6H5JCS2_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS2_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 1.530e-84
Identity = 150/242 (61.98%), Postives = 174/242 (71.90%), Query Frame = -3
Query:  476 CFRRHGEAMHYRRRVDRRLNVRLLQAEVMETLLYGCASLSLSADH*TKLNGTHRQFLTRYIGWSKRKRTGHPL*YAQALL*TGCEETIEATLRKRRLCFAGFVMRMEDDRLPKRVLLGTMSGGKGYQGGQERDWVSHIGEDLVAFGMEDEKEGAKWQKSALEPEEWFSKIVDVVARFMRRWHAREIEASAKRQLDREVKATXXXXXXXXXXXXXXXXXXXXXXXXXTAA-AGRAAEAVLVAN 1198
            C+RR+  +M+ RRR DR+L +RLLQAEV+ETLLYGCAS SL+A+H TKLNGTHRQFLTR IGWSKRKR+  PL YAQAL+  GCEETIEAT+RKRRLCFAGFVMRMED RLPKR+LLG M+GG GY+GGQ  DWVS +GE LVAF M DEKEG KW++SA + E W++K+ DV A FMR+WH +E EASAKRQ                                 TA  A RAAEA LVAN
Sbjct:   97 CYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQGSDWVSRLGEYLVAFNMGDEKEGGKWKESAKDSEVWYNKVEDVAAWFMRKWHRQEAEASAKRQXXXXXXXXSTTISGPKRKRTGEAAVGGKKRRTGTAVEASRAAEAALVAN 338          
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: A0A6H5JEU3_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEU3_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 3.060e-83
Identity = 147/242 (60.74%), Postives = 172/242 (71.07%), Query Frame = -3
Query:  476 CFRRHGEAMHYRRRVDRRLNVRLLQAEVMETLLYGCASLSLSADH*TKLNGTHRQFLTRYIGWSKRKRTGHPL*YAQALL*TGCEETIEATLRKRRLCFAGFVMRMEDDRLPKRVLLGTMSGGKGYQGGQERDWVSHIGEDLVAFGMEDEKEGAKWQKSALEPEEWFSKIVDVVARFMRRWHAREIEASAKRQLDREVKATXXXXXXXXXXXXXXXXXXXXXXXXXTAA-AGRAAEAVLVAN 1198
            C+RR+  +M+ RRR DR+L +RLLQAEV+ETLLYGCAS SL+A+H TKLNGTHRQFLTR IGWSKRKR+  PL YAQAL+  GCEETIEAT+RKRRLCFAG +MRMED RLPKR+LLG M+GG GY+GGQE DWVS +GEDLVAF M DEKEG KW++SA +PE W++K+ D  A  MR+WH +E EASAKR                                  TA  A RA EA LVAN
Sbjct:   97 CYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGNIMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKDPEVWYNKVEDGAAWLMRKWHRQEAEASAKRXXXXXXXXXSTAISGPKRKRVGEAAVGGKKRRPGTAVEASRATEAALVAN 338          
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: A0A6H5JCQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCQ1_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 3.710e-83
Identity = 137/193 (70.98%), Postives = 160/193 (82.90%), Query Frame = -3
Query:  620 CFRRHGEAMHYRRRVDRRLNVRLLQAEVMETLLYGCASLSLSADH*TKLNGTHRQFLTRYIGWSKRKRTGHPL*YAQALL*TGCEETIEATLRKRRLCFAGFVMRMEDDRLPKRVLLGTMSGGKGYQGGQERDWVSHIGEDLVAFGMEDEKEGAKWQKSALEPEEWFSKIVDVVARFMRRWHAREIEASAKRQ 1198
            C+RR+  +M+ RRR +R+L +RLLQ+EV+ETLLYGCAS SL+ADH TKLNGTHRQFLTR IGWSKRKR+  PL YAQAL+  GCEETIEAT+RKRRLCFAGFVMRMED+RLPKR+LLG M GG G +GGQE DWVS +GEDLVAF M DEKEG KW++SA +PE W++K+ D VA  MR WH  E EAS KRQ
Sbjct:   55 CYRRNSASMYDRRRANRQLKIRLLQSEVVETLLYGCASWSLTADHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMGGGVGSRGGQESDWVSCLGEDLVAFNMGDEKEGGKWKESAKDPEVWYNKVEDGVACLMREWHRHEAEASVKRQ 247          
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: A0A6H5L649_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L649_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 1.130e-81
Identity = 133/201 (66.17%), Postives = 163/201 (81.09%), Query Frame = -3
Query:  596 CFRRHGEAMHYRRRVDRRLNVRLLQAEVMETLLYGCASLSLSADH*TKLNGTHRQFLTRYIGWSKRKRTGHPL*YAQALL*TGCEETIEATLRKRRLCFAGFVMRMEDDRLPKRVLLGTMSGGKGYQGGQERDWVSHIGEDLVAFGMEDEKEGAKWQKSALEPEEWFSKIVDVVARFMRRWHAREIEASAKRQLDREVKAT 1198
            C+RR+  +M+ RRR +R+L +RLLQAEV+ET LYGCAS SL+ +H  KLN THRQFLTR +GWS+RKR+  PL YAQA++  GCEETIEAT+RKRRLCFAGFVMRMED+RLPK +LLG M+GG GY+GGQE DWVS +GEDLVAF M DEKEG KW++SA +PE W+ K+ D  A FMR+WH +E E SAKRQ + E +AT
Sbjct:   97 CYRRNSASMYDRRRANRQLKIRLLQAEVVETFLYGCASWSLTTEHYAKLNETHRQFLTRCVGWSRRKRSHRPLSYAQAVIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKHILLGAMAGGVGYRGGQEDDWVSRLGEDLVAFNMGDEKEGGKWKESAKDPEVWYHKVEDGAAWFMRKWHRQEAEESAKRQREGEERAT 297          
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: A0A6H5KU62_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU62_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 1.140e-81
Identity = 138/200 (69.00%), Postives = 165/200 (82.50%), Query Frame = -3
Query:  599 CFRRHGEAMHYRRRVDRRLNVRLLQAEVMETLLYGCASLSLSADH*TKLNGTHRQFLTRYIGWSKRKRTGHPL*YAQALL*TGCEETIEATLRKRRLCFAGFVMRMEDDRLPKRVLLGTMSGGKGYQGGQERDWVSHIGEDLVAFGMEDEKEGAKWQKSALEPEEWFSKIVDVVARFMRRWHAREIEASAKRQLDREVKA 1198
            C+RR+  +M+ RRR +R+L +RLLQAEV+ETLLYGCAS SL+A+H TKLNGTHRQFLTR IGWSKRKR+  PL YAQAL+  GCEETIEAT+R+RRLCF GFVMRMED RLPKR+LLG M+GG GY+GGQE DWVS +GEDLVAF M DEKEG KW++SA   E W++K+ D  A FMR+WH +E EASAKRQ  RE ++
Sbjct:  244 CYRRNSASMYDRRRANRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRQRRLCFGGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKWHRQEAEASAKRQRARESRS 443          
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: A0A6H5LD24_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD24_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 1.240e-81
Identity = 138/200 (69.00%), Postives = 166/200 (83.00%), Query Frame = -3
Query:  599 CFRRHGEAMHYRRRVDRRLNVRLLQAEVMETLLYGCASLSLSADH*TKLNGTHRQFLTRYIGWSKRKRTGHPL*YAQALL*TGCEETIEATLRKRRLCFAGFVMRMEDDRLPKRVLLGTMSGGKGYQGGQERDWVSHIGEDLVAFGMEDEKEGAKWQKSALEPEEWFSKIVDVVARFMRRWHAREIEASAKRQLDREVKA 1198
            C+RR+  +M+ RRR DR+L +RLLQA+V+ETLLYGCAS  L+A+H TKLNGTHRQFLTR IGWSKRKR+  PL YAQAL+  GCEETIEAT+RKRRLCFAGFVMRMED+RLPKR+LLG M+GG GY+GGQE DWV  +GEDLVAFGM++EKEG +W++SA + E W+ KI D  A FMR+WH +E EASAKRQ  R  +A
Sbjct:  287 CYRRNSASMYDRRRADRQLKIRLLQAKVVETLLYGCASWGLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQEAEASAKRQRARGAEA 486          
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: A0A6H5K065_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K065_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 3.620e-80
Identity = 140/200 (70.00%), Postives = 168/200 (84.00%), Query Frame = -3
Query:  599 CFRRHGEAMHYRRRVDRRLNVRLLQAEVMETLLYGCASLSLSADH*TKLNGTHRQFLTRYIGWSKRKRTGHPL*YAQALL*TGCEETIEATLRKRRLCFAGFVMRMEDDRLPKRVLLGTMSGGKGYQGGQERDWVSHIGEDLVAFGMEDEKEGAKWQKSALEPEEWFSKIVDVVARFMRRWHAREIEASAKRQLDREVKA 1198
            C+RR+  +M+ RRR DR+L +RLLQAEV+ETLLYGCAS SL+ +H TKLNGTHRQFLTR IGWSKR+R+  PL YAQAL+  GCEETIEAT+RKRRLCFAGFVMRMED+RLPKR+LLG M+GG GY+GGQE DWVS +GEDLVAF M DEKEG KW++SA +PE W++K+ D  A F+R+WH +E EA AKRQ  REV+A
Sbjct:  610 CYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTVEHYTKLNGTHRQFLTRCIGWSKRQRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGDKWKESAKDPEVWYNKVEDGAALFVRKWHRQEAEAPAKRQRAREVEA 809          
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: A0A6H5JHY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY4_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 9.950e-80
Identity = 134/186 (72.04%), Postives = 160/186 (86.02%), Query Frame = -3
Query:  641 CFRRHGEAMHYRRRVDRRLNVRLLQAEVMETLLYGCASLSLSADH*TKLNGTHRQFLTRYIGWSKRKRTGHPL*YAQALL*TGCEETIEATLRKRRLCFAGFVMRMEDDRLPKRVLLGTMSGGKGYQGGQERDWVSHIGEDLVAFGMEDEKEGAKWQKSALEPEEWFSKIVDVVARFMRRWHAREI 1198
            C+RR+  +M+ RRR DR+L +RLLQAEV+ETLLYGCASLSL+A+H TKLNGTHRQFLTR IGWSKRKR+  PL YAQAL+  GCEETIEAT+RKRRLCFAGFVMRMED+RLPKR+LLG M+GG GY+GGQE DWVS +GEDLVAF M DEKEG KW++SA +PE W++K+ D  A FMR+WH +E+
Sbjct:  249 CYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASLSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKDPEVWYNKVEDGAAWFMRKWHRQEV 434          
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Match: A0A6H5KB07_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB07_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 1.160e-79
Identity = 130/188 (69.15%), Postives = 159/188 (84.57%), Query Frame = -3
Query:  635 CFRRHGEAMHYRRRVDRRLNVRLLQAEVMETLLYGCASLSLSADH*TKLNGTHRQFLTRYIGWSKRKRTGHPL*YAQALL*TGCEETIEATLRKRRLCFAGFVMRMEDDRLPKRVLLGTMSGGKGYQGGQERDWVSHIGEDLVAFGMEDEKEGAKWQKSALEPEEWFSKIVDVVARFMRRWHAREIEA 1198
            C+RR+  +M+ R+R +R+L +RLLQAEV++TLLYGCAS SL+A+H TKLNGTHRQFLTR IGWSKRKR+  PL YAQAL+  GCEETIEAT+RKRRLCFAGFVMRMED+RLPKR+LLG M+GG GY+GGQE DWV  +GEDLVAFGM++EKEG +W++SA + E W+ KI D  A FMR+WH +E EA
Sbjct:  108 CYRRNSTSMYDRKRANRQLKIRLLQAEVVQTLLYGCASWSLAAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQEAEA 295          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8119.17109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGF6_9PHAE7.260e-8562.82Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCS2_9PHAE1.530e-8461.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JEU3_9PHAE3.060e-8360.74Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCQ1_9PHAE3.710e-8370.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L649_9PHAE1.130e-8166.17Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KU62_9PHAE1.140e-8169.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LD24_9PHAE1.240e-8169.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K065_9PHAE3.620e-8070.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JHY4_9PHAE9.950e-8072.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB07_9PHAE1.160e-7969.15Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8119contigL-elsbetiae_contig8119:41..4877 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-06_009260.1
Exons5
Model size2759
Cds size981
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8119.17109.1prot_L-elsbetiae_contig8119.17109.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8119 1817..4877 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816896.2191923-UTR-L-elsbetiae_contig8119:40..18161622816896.2191923-UTR-L-elsbetiae_contig8119:40..1816Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8119 41..1816 +
1691683894.825434-UTR-L-elsbetiae_contig8119:40..18161691683894.825434-UTR-L-elsbetiae_contig8119:40..1816Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8119 41..1816 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816896.232336-CDS-L-elsbetiae_contig8119:1816..21581622816896.232336-CDS-L-elsbetiae_contig8119:1816..2158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8119 1817..2158 +
1691683894.836933-CDS-L-elsbetiae_contig8119:1816..21581691683894.836933-CDS-L-elsbetiae_contig8119:1816..2158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8119 1817..2158 +
1622816896.2447536-CDS-L-elsbetiae_contig8119:2621..28401622816896.2447536-CDS-L-elsbetiae_contig8119:2621..2840Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8119 2622..2840 +
1691683894.8475914-CDS-L-elsbetiae_contig8119:2621..28401691683894.8475914-CDS-L-elsbetiae_contig8119:2621..2840Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8119 2622..2840 +
1622816896.2577925-CDS-L-elsbetiae_contig8119:3570..36451622816896.2577925-CDS-L-elsbetiae_contig8119:3570..3645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8119 3571..3645 +
1691683894.8602855-CDS-L-elsbetiae_contig8119:3570..36451691683894.8602855-CDS-L-elsbetiae_contig8119:3570..3645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8119 3571..3645 +
1622816896.2690082-CDS-L-elsbetiae_contig8119:4206..44971622816896.2690082-CDS-L-elsbetiae_contig8119:4206..4497Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8119 4207..4497 +
1691683894.8795445-CDS-L-elsbetiae_contig8119:4206..44971691683894.8795445-CDS-L-elsbetiae_contig8119:4206..4497Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8119 4207..4497 +
1622816896.2795446-CDS-L-elsbetiae_contig8119:4823..48771622816896.2795446-CDS-L-elsbetiae_contig8119:4823..4877Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8119 4824..4877 +
1691683894.8905652-CDS-L-elsbetiae_contig8119:4823..48771691683894.8905652-CDS-L-elsbetiae_contig8119:4823..4877Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8119 4824..4877 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8119.17109.1

>prot_L-elsbetiae_contig8119.17109.1 ID=prot_L-elsbetiae_contig8119.17109.1|Name=mRNA_L-elsbetiae_contig8119.17109.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=327bp
MYCRKLWRFGALVTPPPETSQKQFWVCRVGSSFVCPCLHPLILTFADRFC
FLRVESPAAGMWRWFTYDDDDIENDDAKGDTEGGTSQQEEEQEQDVAATL
DVVVPAVTAAILAQAAFRGYRLRERLRRLPAREAEKQIKALHRNARGFRR
VGLFLAFAGLYFALVFYGVDVSFERSVQQSLTDHLELVHYGPDSDKTHRD
VNSLADLHQWMQAFYVKTYSGTQVEHPCMACAVKPPDDVCDGCDFNLYDA
QTADDDVHDDADDGGSTNGRRRRLTSSDRDSDFDSGSESSSSSSFSGRHG
LSKECGACVVGRLCTGKYLEICEAALG
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mRNA from alignment at L-elsbetiae_contig8119:41..4877+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8119.17109.1 ID=mRNA_L-elsbetiae_contig8119.17109.1|Name=mRNA_L-elsbetiae_contig8119.17109.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4837bp|location=Sequence derived from alignment at L-elsbetiae_contig8119:41..4877+ (Laminarionema elsbetiae ELsaHSoW15)
CGTTGGAGTTCAGAATCTTTGGTTCAAAGATCTGGGTTATTCTTTTTTCT TTCGTCTTGCATCACCCCCGTCCCCTGTGCTCTCATGAGCTCGCTCCGAA GGGTGATCTTGTATGGTATATATCTATGTCTAGAGTACATACTCGGAAGA TAAATTAAAAGAAAGTTCGAAAAAGCAAACCAAATACCAAATACCACGCC AGGTGAGGAAAGTGAACTACAGAGAGCCGAAGGCTTCCCACACCAGAAAG AGGCAGGAAAAAGGCCGGGAGGCAGAGGTCCGAGAGCCAAATATGTACCA AGATAGCAAAATAGCAGGGGACCAAAGGCCGGCCAAAAAGGCGAGTGGCA ACATGGCACGTAGGCAGACAAAACAGACTGGCTAGGGCTAGAAAAAACAA AAACAAAAAGACAAGCGGGGCACAACGGCGAAGAGTAAAAAGCACGATTA ACGGGCAGAGCACTAATCAGGTACGGTTCGCCACCAACACGGCCTCTGCT GCTCTGCCTGCTGCGGCGGTTTCCGACTTCCGTTTCTTCCCTTCCCCCTC TGATTTCCCACTCCTCTTTCTCTTCGGCCCAGCAGCGGCCGTAGCAGTTG CCTTCACCTCCCTATCGAGCTGCCGCTTCGCGGATGCTTCTATTTCCCGT GCGTGCCACCTCCTCATGAATCGCGCCACAACGTCTACGATCTTGCTGAA CCACTCCTCAGGTTCCAGGGCGCTCTTCTGCCACTTTGCCCCCTCCTTTT CGTCCTCCATGCCGAACGCCACCAGGTCTTCCCCTATGTGGGAAACCCAA TCTCTCTCCTGCCCGCCCTGGTACCCCTTGCCCCCCGACATCGTTCCCAG CAGAACACGCTTGGGCAGGCGATCGTCCTCCATGCGCATGACGAATCCCG CGAAACATAGCCTCCGTTTGCGCAAGGTGGCCTCGATAGTTTCCTCGCAT CCGGTTTAGAGAAGGGCCTGGGCGTACTACAGGGGGTGGCCCGTGCGTTT CCGCTTGCTCCAACCGATGTACCGCGTGAGGAACTGGCGGTGGGTCCCGT TGAGTTTGGTTTAGTGGTCCGCTGAAAGACTCAACGAGGCGCATCCATAC AGGAGCGTCTCCATCACTTCGGCCTGGAGTAGCCGAACGTTGAGCCGGCG GTCGACTCGTCGCCTGTAGTGCATCGCTTCGCCGTGCCGGCGGAAGCAAA TCTACGTGCTCGCCCCCATTTGACGGGACTATTCTTGGCTGGATCTGCTT GTGCACTTACTTCAAATGCGATTCCTGGAGACGCCCCCCCTCAGGCTGAC CTCAACTTGCCTCAACCAAATCAAAAGTCTTGTTTCTCAAGTCTCAATAC TTCTTCTGCGACAGCGTTGGTCAGAATAGAAAATGGAACGACACAACAAC AACAGATGACAAACGAGCAGTCTACCTTGCGTAAATTCTGTACTTCAAAA CACCAAGCTTGCGCAATACGCAGTCTAGATATGAATGTAGATATACCCTT CCCATCTGGGACACATCATTGCCGCAGATGCCTTTATAGCCAAGTCTTTT ATAAGGGGGGCGGTAATGGGGCTCCCCCTCCCATGAGACTGCCGTGTTCA TCGTGACCACTCTCTCCCTCTTTCTCTGTATCTTCTGCTGCGGTTACGCA GTTGTCGTGGATAAAGCACCGCCGCAGGGGCTGCGTGGATTTATATCCCC CGCCTGAACCGTGCCCCGTTTCTGCAGGTGTAGGGTGAAGTGTGGGGTCA TTTTATCATATACTTCTACTCCGTATATGTATTGTCGGAAATTATGGCGT TTTGGGGCCCTCGTAACCCCCCCCCCTGAGACGTCCCAAAAACAGTTTTG GGTCTGTCGTGTGGGGAGTTCTTTTGTGTGCCCTTGCCTTCATCCCCTTA TCCTCACATTCGCCGATCGTTTTTGTTTTTTGCGGGTGGAGAGCCCAGCC GCAGGTATGTGGCGCTGGTTCACTTACGACGATGATGATATAGAGAACGA TGATGCAAAAGGAGACACGGAGGGGGGCACTTCGCAGCAGGAAGAGGAGC AAGAGCAAGATGTTGCCGCGACGTTGGATGTTGTTGTCCCGGCGGTTACC GCCGCGATACTGGCCCAGGTTGGAGATCTATGTTGTTTTGAGGAGTGTAC TCCTTTCCTTTTCACGTGCTACTATAACAAGGGATAACAAATGGTGCTGT ACATTTATTTGCACCATTGCGCATTCGTTGTCCTTTGGTGAAGTTGAAGG TTACTTGCTGCTGCGGGGTAAATGTGTTATCTCGATTCAGTTACATACGT ACACATACACATGACATACAAGAGGTACATGAACGAGACCTGCGATCTTG GCGAACAGTGCTAGACGTCCTGCCCTCTCTCAGCAAGAATTTCATTTGTT GGTTTTATGTCTGTCTATGTGGGCACGGCCTGCTGTGGGATGCTATTAAT TGGCAGTCTACATAGATACCAGATACGTGTAGCAGTGCTTTGGCGGCGGG ATCGCGATACATGGCCCCATGGATGGCATTGGTCCCTAATGAACGTACTC CTACGCGTAAAACCTAAAACCTAACCCCCAGGCCGCGTTTCGAGGCTATC GTCTACGTGAGCGGCTTCGCCGGCTGCCTGCCAGGGAGGCGGAGAAGCAG ATAAAAGCATTGCACCGCAACGCGCGGGGGTTCCGGCGGGTGGGTCTCTT TCTTGCGTTTGCTGGACTGTACTTTGCCTTGGTGTTCTACGGCGTGGACG TCTCCTTCGAACGCTCTGTGCAACAGTCCCTGACGGACCATCTCGAGTTG GTGAGTCGGCCGCCACGATGGCGAGAGGGGCGGTGTCGAGGAACGCAGTC TACAGAGTCAACGGTAACGGCCCGTCGGGTGGTTGGGTTGAGCCGGCTGT GAGAACAGTACCCGGTCTATCGGCTTCCCATGCCGACCGCGTTAGTTTCG CCCATTGAGTTAGTTTCAGTGAGTGCCACTTCCACAAACGAACTCTTCCG CTGCGCCACAAGCATATCAGTAGAGATACGTATGGCATCAACATCAATAG TACCCAGGACTTGGTTCGGTTCGGGGGCACTCGCTGAAAGCATTTGTTTT TCATGCGCTTCATGGTGTTGGTACCAGATGCGACCTCTCTTTCGGCGTTA TCGCCTCTGTTACAGAGCGGGCTCACTGCCTACTTCGAAGAGACTGCGTG TATACCTTCGAAGTACCAAATAGCATGGGAGGACGACGCCCACTCATAAC GACGTCCGCCCGCTGCTTCTTTCCACCCACCTCTCTAGGGGTGCAAAACA TTTTCAGTTTTTCCGATGTGCTCTGGCAAAGAGCAACGGCGTCCGTGTGT CCGTTCGTGAAATCCTCTTATCAGATGTAGAGTGTTTTTTTCCCCCTCTG TTAAATATACCCGATATTCCTGCTGAGTTGTTGGCCCTTGCTGTCCGCTG TATACTGCATGCTGGATGCCTACCTAAGCCGCCGCGCTTCGCGTCCTATA CGCACCCGTTCTGCTGATTTGGCTGATCAGGTCCACTACGGGCCGGATTC TGACAAAACCCATCGTGACGTCAATTCTTTGGCCGATCTTCACCAGTGGA TGCAGGTGGGCGCGACATGTCTGACTGGCTCATTCTCCCGCCTGATTCTC CCTATATGTGCGATGCATGGAGCATTGTATGGTTCGTTTTCTTCCGACAG TATCAGTCGCTTTGCGTGCAGGCTTTTCTTTCTCCTTTTTTTCTTTCTCT TGTTGCCTTTTTCCCCGTGTTTTCTCGCCGTCGTTTGGTTTGGTACCCCC CTCTTTTGGCTCTTGATGCCCCCCTCTCTCCCTTCTTCCTCTCTACTTCT TTCTGGCCGGATGGTGTTCACCCCTGCCTTTGTCGAATTCCATTTCTGGT GTGGTTCCGGACGAACTGAGCGTGCCGCCCAGTGGTAGATGCCGCCTTCC GATGGTTGCTTACAAAAATGTGGTGTTTCCTCTTCCGCGGAAGTATCGAG TTTGCTTCACGATTTCTTCCCCCCTCCACTCCTCACTCACCTTTACCATA CAATACCATATACCCTCCCTATCCTCTTTCGGGCTTGGACAATCTAATAT TGTCTACTTTGTCTACTCTGAACGCTGCCGGGTGACACACACACGCACAC ACTCACACGTACCCAGGCGTTCTACGTGAAGACGTACTCCGGGACGCAGG TGGAGCATCCGTGCATGGCGTGCGCCGTTAAACCCCCAGACGACGTGTGC GACGGCTGCGACTTCAACCTCTACGACGCACAGACGGCAGATGACGATGT TCATGATGATGCAGACGACGGTGGTTCTACGAACGGCCGCCGCCGCCGTT TAACTTCGAGTGATCGTGACAGCGATTTTGATTCTGGCAGCGAGAGCAGC AGCAGCAGCAGCTTCAGCGGTCGCCATGGCCTCTCTAAAGAATGCGGAGC GTGTGTGGTGAGCGGCGCGCGGGAGAGCCATTGATCGTGATCGATGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGCAGCTGTTGGGCAGCTGTT GCTGTCGAGGTGGCGTCACTCTCTTGCTGCGGTCGTGAACGCGTTCTTGT TGTGTTGTTTCTTCGAACAGGCTCCGTCCTTCCCTCGTCACACCGCGCCC AACCTGCAGCGAGCTTTTCACCACGATGAAGCGAACGCTTTTTCATACGC AACCTCCCCTTTTGTTGGACTGTCACGACAAACGACAATGGTCGCCGCTT GTACTACTCTCGCACTGCGTTTTCCCCTTTCAGGTCGGACGACTCTGCAC GGGGAAGTACTTGGAGATATGCGAGGCGGCTCTCGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8119:41..4877+

>mRNA_L-elsbetiae_contig8119.17109.1 ID=mRNA_L-elsbetiae_contig8119.17109.1|Name=mRNA_L-elsbetiae_contig8119.17109.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1962bp|location=Sequence derived from alignment at L-elsbetiae_contig8119:41..4877+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTATTGTCGGAAATTATGGCGTTTTGGGGCCCTCGTAACCCCCCCCCC
TGAGACGTCCCAAAAACAGTTTTGGGTCTGTCGTGTGGGGAGTTCTTTTG
TGTGCCCTTGCCTTCATCCCCTTATCCTCACATTCGCCGATCGTTTTTGT
TTTTTGCGGGTGGAGAGCCCAGCCGCAGGTATGTGGCGCTGGTTCACTTA
CGACGATGATGATATAGAGAACGATGATGCAAAAGGAGACACGGAGGGGG
GCACTTCGCAGCAGGAAGAGGAGCAAGAGCAAGATGTTGCCGCGACGTTG
GATGTTGTTGTCCCGGCGGTTACCGCCGCGATACTGGCCCAGATGTATTG
TCGGAAATTATGGCGTTTTGGGGCCCTCGTAACCCCCCCCCCTGAGACGT
CCCAAAAACAGTTTTGGGTCTGTCGTGTGGGGAGTTCTTTTGTGTGCCCT
TGCCTTCATCCCCTTATCCTCACATTCGCCGATCGTTTTTGTTTTTTGCG
GGTGGAGAGCCCAGCCGCAGGTATGTGGCGCTGGTTCACTTACGACGATG
ATGATATAGAGAACGATGATGCAAAAGGAGACACGGAGGGGGGCACTTCG
CAGCAGGAAGAGGAGCAAGAGCAAGATGTTGCCGCGACGTTGGATGTTGT
TGTCCCGGCGGTTACCGCCGCGATACTGGCCCAGGCCGCGTTTCGAGGCT
ATCGTCTACGTGAGCGGCTTCGCCGGCTGCCTGCCAGGGAGGCGGAGAAG
CAGATAAAAGCATTGCACCGCAACGCGCGGGGGTTCCGGCGGGTGGGTCT
CTTTCTTGCGTTTGCTGGACTGTACTTTGCCTTGGTGTTCTACGGCGTGG
ACGTCTCCTTCGAACGCTCTGTGCAACAGTCCCTGACGGACCATCTCGAG
TTGGCCGCGTTTCGAGGCTATCGTCTACGTGAGCGGCTTCGCCGGCTGCC
TGCCAGGGAGGCGGAGAAGCAGATAAAAGCATTGCACCGCAACGCGCGGG
GGTTCCGGCGGGTGGGTCTCTTTCTTGCGTTTGCTGGACTGTACTTTGCC
TTGGTGTTCTACGGCGTGGACGTCTCCTTCGAACGCTCTGTGCAACAGTC
CCTGACGGACCATCTCGAGTTGGTCCACTACGGGCCGGATTCTGACAAAA
CCCATCGTGACGTCAATTCTTTGGCCGATCTTCACCAGTGGATGCAGGTC
CACTACGGGCCGGATTCTGACAAAACCCATCGTGACGTCAATTCTTTGGC
CGATCTTCACCAGTGGATGCAGGCGTTCTACGTGAAGACGTACTCCGGGA
CGCAGGTGGAGCATCCGTGCATGGCGTGCGCCGTTAAACCCCCAGACGAC
GTGTGCGACGGCTGCGACTTCAACCTCTACGACGCACAGACGGCAGATGA
CGATGTTCATGATGATGCAGACGACGGTGGTTCTACGAACGGCCGCCGCC
GCCGTTTAACTTCGAGTGATCGTGACAGCGATTTTGATTCTGGCAGCGAG
AGCAGCAGCAGCAGCAGCTTCAGCGGTCGCCATGGCCTCTCTAAAGAATG
CGGAGCGTGTGTGGCGTTCTACGTGAAGACGTACTCCGGGACGCAGGTGG
AGCATCCGTGCATGGCGTGCGCCGTTAAACCCCCAGACGACGTGTGCGAC
GGCTGCGACTTCAACCTCTACGACGCACAGACGGCAGATGACGATGTTCA
TGATGATGCAGACGACGGTGGTTCTACGAACGGCCGCCGCCGCCGTTTAA
CTTCGAGTGATCGTGACAGCGATTTTGATTCTGGCAGCGAGAGCAGCAGC
AGCAGCAGCTTCAGCGGTCGCCATGGCCTCTCTAAAGAATGCGGAGCGTG
TGTGGTCGGACGACTCTGCACGGGGAAGTACTTGGAGATATGCGAGGCGG
CTCTCGGGGTCGGACGACTCTGCACGGGGAAGTACTTGGAGATATGCGAG
GCGGCTCTCGGG
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