prot_L-elsbetiae_contig81.17094.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig81.17094.1
Unique Nameprot_L-elsbetiae_contig81.17094.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length316
Homology
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BLAST of mRNA_L-elsbetiae_contig81.17094.1 vs. uniprot
Match: D7FV96_ECTSI (Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV96_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 9.460e-42
Identity = 191/329 (58.05%), Postives = 219/329 (66.57%), Query Frame = 0 
Query:    1 QVVGDAFVRDGDSSSRAPSLSVLSAALFATCLASQSGDAAAVLHLLKFHGDGVEEVRDENGRTPLHHVCRADDVGLVRLLCQAGADDAAQDCQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDLLNTKPMFTRGRLPKVLRATLNYIERAEASAAHHDSPTWTAHDGYGSEATAAPM-ASRRSLA---DNHLHRRGSFGQPSPRWGG----QQLTTVSG-----RTLPDQRRYTKESTHTSTADRREREQDRQPREMREGGDVFDGQSEGGLSSAGSRRGGRSKWV 316
            +V+G      GD+SS  PS S LS ALFA  LAS+  DAAAV+ LL+ +G G+ +V D+NGRTPLHH CR DD GLVRLL +AGAD       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      REDLLN++P F RGRLPKVLRATL YI+ AEASA    SPTWTA DGYGSE T A + +SRRS       H         P P   G    QQ+ T S        L   R + K   H +  DR ER +D   RE++  G+V +G++E    S GSRRG R++ V
Sbjct:  389 EVMGAVLAGGGDNSS-VPSCSALSTALFAATLASRYNDAAAVIRLLEVYGRGIADVHDDNGRTPLHHACRGDDAGLVRLLRRAGADPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGFTPREDLLNSEPTFARGRLPKVLRATLAYIQDAEASAPQPQSPTWTAQDGYGSEGTPATVVSSRRSPIGGPSRHAFDINFNSGPEPPSEGEGPLQQIDTASASGKETEALHYYRHHAKGRAHATATDRLERNRDWDLRELQGSGNVLEGRNEDKTFSNGSRRGNRNRLV 716
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BLAST of mRNA_L-elsbetiae_contig81.17094.1 vs. uniprot
Match: A0A6H5L1T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T4_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 1.990e-30
Identity = 157/392 (40.05%), Postives = 183/392 (46.68%), Query Frame = 0 
Query:    6 AFVRDGDSSSRAPSLSVLSAALFATCLASQSGDAAAVLHLLKFHGDGVEEVRDENGRTPLHHVCRADDVGLVRLLCQAGADDAAQDCQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------REDLLNTKPMFTRGRLPKVLRATLNYIERAEASAAH---------HDSPTWTAHDGYGSEAT-AAPMASRRSLADNHLHRR-----GSFGQPSPRWGG---QQLTTVSG-----RTLPDQRRYTKESTHTSTADRREREQDRQPREMREGGDVFDGQSEGGLSSAGSRRG 310
            A + +G  +SR PS S LS ALFA  LAS+  DAAAV+ LL+  G G+ +VRD+NGRTPLHH CR DD GLVRLL +AGAD  A D  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                       REDLLN++ MF RGRLPKVLRATL Y++ AEASA             SPTWTA DGYGSE T A  ++SRRS    H          S  QP P  G    QQ+ T S        L   R + K   H +  DR ER +D   RE++  G+V + ++E    S GSRRG
Sbjct:    3 AVLAEGGDNSRVPSCSALSTALFAATLASRYNDAAAVIRLLEVCGRGIADVRDDNGRTPLHHACRGDDAGLVRLLRRAGADPDAHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEDTPLHLAVGFSSVPNDRVGTCTHPNTFHPGNAINHVASEPSLGVRCLEYVHQGRRRSASFPTNTLDLGPIQVRHGNLSCVKALVEGGAKLSRRNTLGFTPREDLLNSETMFARGRLPKVLRATLAYVQDAEASAPQPQWQASAPQSQSPTWTAQDGYGSEDTPATAVSSRRSSIGGHFRHAFDANFDSDAQP-PSEGERPLQQINTASASGKETEALHYYRHHAKGKAHATATDRLERNRDWDLRELQGSGNVLERRNEDESVSNGSRRG 393
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig81.17094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FV96_ECTSI9.460e-4258.05Chain A, 4ank: A Designed Ankyrin Repeat Protein W... [more]
A0A6H5L1T4_9PHAE1.990e-3040.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 126..155
e-value: 3.2E-7
score: 40.0
coord: 93..122
e-value: 5.8E-5
score: 32.5
coord: 60..89
e-value: 0.0025
score: 27.1
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 126..157
e-value: 7.9E-6
score: 26.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 126..158
score: 13.678
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 93..125
score: 12.129
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 60..92
score: 11.14
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 32..123
e-value: 1.2E-13
score: 51.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 32..163
score: 35.756
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 22..225
e-value: 6.2E-38
score: 132.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 29..164
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 56..163
coord: 33..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig81contigL-elsbetiae_contig81:15563..17490 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig81.17094.1mRNA_L-elsbetiae_contig81.17094.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig81 15563..17490 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig81.17094.1 ID=prot_L-elsbetiae_contig81.17094.1|Name=mRNA_L-elsbetiae_contig81.17094.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=316bp
QVVGDAFVRDGDSSSRAPSLSVLSAALFATCLASQSGDAAAVLHLLKFHG
DGVEEVRDENGRTPLHHVCRADDVGLVRLLCQAGADDAAQDCQGNSPLMV
AAATGSLACLQLLVQQGGDLNCSNDDGDTPLHVAVRHGNLSCVKALVEAG
AWLSQRNTQGCTPREDLLNTKPMFTRGRLPKVLRATLNYIERAEASAAHH
DSPTWTAHDGYGSEATAAPMASRRSLADNHLHRRGSFGQPSPRWGGQQLT
TVSGRTLPDQRRYTKESTHTSTADRREREQDRQPREMREGGDVFDGQSEG
GLSSAGSRRGGRSKWV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf