prot_L-elsbetiae_contig807.17062.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig807.17062.1
Unique Nameprot_L-elsbetiae_contig807.17062.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length115
Homology
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BLAST of mRNA_L-elsbetiae_contig807.17062.1 vs. uniprot
Match: D7FGR5_ECTSI (Transcription factor prr1 (Pombe response regulator 1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR5_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 3.060e-40
Identity = 76/97 (78.35%), Postives = 84/97 (86.60%), Query Frame = 0 
Query:   19 GMRMEFWEKARKRRTMSTQLVFPGQPPENTKDIDQPDPSLCDVMDVICQCMEVRNSSSESQQSQLSAFSGCSFNMDSLRRSSISDLLNCMSWESALR 115
            GMRM +WEK RKRRT+S QLVFP QPP NT+ IDQPDPSLCDVMDVICQCMEV++SS    +SQLSA SGCSF  +S+RRSSISDLLNCMSWESALR
Sbjct:  255 GMRMAYWEKNRKRRTLSAQLVFPVQPPNNTETIDQPDPSLCDVMDVICQCMEVQSSS----ESQLSALSGCSFKRESMRRSSISDLLNCMSWESALR 347
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig807.17062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGR5_ECTSI3.060e-4078.35Transcription factor prr1 (Pombe response regulato... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig807contigL-elsbetiae_contig807:27027..29384 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig807.17062.1mRNA_L-elsbetiae_contig807.17062.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig807 27027..29387 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig807.17062.1 ID=prot_L-elsbetiae_contig807.17062.1|Name=mRNA_L-elsbetiae_contig807.17062.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=115bp
MGMGMGGGASTASSGGGPGMRMEFWEKARKRRTMSTQLVFPGQPPENTKD
IDQPDPSLCDVMDVICQCMEVRNSSSESQQSQLSAFSGCSFNMDSLRRSS
ISDLLNCMSWESALR
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