prot_L-elsbetiae_contig8060.17054.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8060.17054.1
Unique Nameprot_L-elsbetiae_contig8060.17054.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length121
Homology
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BLAST of mRNA_L-elsbetiae_contig8060.17054.1 vs. uniprot
Match: A0A6H5JW92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW92_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.360e-37
Identity = 77/116 (66.38%), Postives = 89/116 (76.72%), Query Frame = 0 
Query:    1 ESDPARLLSEAVGFYRLAADLEEGGGGGTG--------RGLFSLGWMHQHGVGVTADPALARQYYRQSGSAPAIVGLWLMGASELAAEVGAPLAFSVAVVAATMLLFQL---RKRG 105
            ESD A+LLS+AV +Y+LAA   EGGGG  G        RGLFSLGWMHQHGVGV ADPALAR+ YR+SGSAPA++GLW+MGAS+LA E+GAPLA S  VVAATML  +L   R RG
Sbjct:   83 ESDAAQLLSDAVAYYKLAA---EGGGGEGGLGGSSPSQRGLFSLGWMHQHGVGVEADPALARELYRRSGSAPALLGLWMMGASDLALEIGAPLAVSAVVVAATMLAMRLLGKRHRG 195
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BLAST of mRNA_L-elsbetiae_contig8060.17054.1 vs. uniprot
Match: D8LMU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU4_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 9.500e-35
Identity = 73/101 (72.28%), Postives = 85/101 (84.16%), Query Frame = 0 
Query:    1 ESDPARLLSEAVGFYRLAAD--LEEGGGGGTG---RGLFSLGWMHQHGVGVTADPALARQYYRQSGSAPAIVGLWLMGASELAAEVGAPLAFSVAVVAATM 96
            ESD A+LLS+AV +YRLAA+    EGG GG+    RGLFSLGWMHQHGVGV ADPALAR+ YR+SGSAPA++GLW+MGAS+LA E+GAPLA SV VVAATM
Sbjct:  970 ESDAAQLLSDAVAYYRLAAEGGRGEGGLGGSSPSQRGLFSLGWMHQHGVGVEADPALARELYRRSGSAPALLGLWMMGASDLALEIGAPLAVSVVVVAATM 1070
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BLAST of mRNA_L-elsbetiae_contig8060.17054.1 vs. uniprot
Match: A0A6H5KY48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY48_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.050e-17
Identity = 44/67 (65.67%), Postives = 52/67 (77.61%), Query Frame = 0 
Query:   42 HGVGVTADPALARQYYRQSGSAPAIVGLWLMGASELAAEVGAPLAFSVAVVAATMLLFQL---RKRG 105
            HGVGV ADPALAR+ YR+SGS PA++GLW+MGAS+LA E+GAP A S   VAATML  +L   R RG
Sbjct:    9 HGVGVEADPALARELYRRSGSTPALLGLWMMGASDLALEIGAPRAVSAVRVAATMLAMRLLGKRHRG 75
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8060.17054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JW92_9PHAE1.360e-3766.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMU4_ECTSI9.500e-3572.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KY48_9PHAE2.050e-1765.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 30..65
e-value: 2.0E-4
score: 30.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 4..88
e-value: 3.4E-7
score: 32.2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..121
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..80
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 9..60
NoneNo IPR availableTMHMMTMhelixcoord: 77..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8060contigL-elsbetiae_contig8060:2211..3116 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8060.17054.1mRNA_L-elsbetiae_contig8060.17054.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8060 2209..3116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8060.17054.1 ID=prot_L-elsbetiae_contig8060.17054.1|Name=mRNA_L-elsbetiae_contig8060.17054.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp
ESDPARLLSEAVGFYRLAADLEEGGGGGTGRGLFSLGWMHQHGVGVTADP
ALARQYYRQSGSAPAIVGLWLMGASELAAEVGAPLAFSVAVVAATMLLFQ
LRKRGRRGGGGGGGRPSRDHR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf