prot_L-elsbetiae_contig8.16979.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8.16979.1
Unique Nameprot_L-elsbetiae_contig8.16979.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length55
Homology
BLAST of mRNA_L-elsbetiae_contig8.16979.1 vs. uniprot
Match: D8LBG9_ECTSI (NADPH:adrenodoxin oxidoreductase, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBG9_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 8.450e-8
Identity = 34/46 (73.91%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 CTAGR-ARTAIVRGKATAAAPAGRPLRVCVVGSGPAGFYVTKYLLK 45
            C + R A TAI R  AT  + AGRPLRVCVVGSGPAGFYVTKYLLK
Sbjct:   33 CVSARTAGTAIQRPTATDVS-AGRPLRVCVVGSGPAGFYVTKYLLK 77          
BLAST of mRNA_L-elsbetiae_contig8.16979.1 vs. uniprot
Match: A0A6H5L1K8_9PHAE (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K8_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 2.120e-7
Identity = 25/25 (100.00%), Postives = 25/25 (100.00%), Query Frame = 0
Query:   21 AGRPLRVCVVGSGPAGFYVTKYLLK 45
            AGRPLRVCVVGSGPAGFYVTKYLLK
Sbjct:   53 AGRPLRVCVVGSGPAGFYVTKYLLK 77          
BLAST of mRNA_L-elsbetiae_contig8.16979.1 vs. uniprot
Match: A0A835ZC91_9STRA (NADPH:adrenodoxin oxidoreductase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC91_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 6.090e-5
Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = 0
Query:   24 PLRVCVVGSGPAGFYVTKYLLK 45
            PLRVCVVGSGPAGFY TKYLLK
Sbjct:   53 PLRVCVVGSGPAGFYTTKYLLK 74          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8.16979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBG9_ECTSI8.450e-873.91NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
A0A6H5L1K8_9PHAE2.120e-7100.00Pyr_redox_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A835ZC91_9STRA6.090e-595.45NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 24..53
e-value: 1.1E-7
score: 33.6
NoneNo IPR availableSUPERFAMILY51971Nucleotide-binding domaincoord: 24..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8contigL-elsbetiae_contig8:70729..70893 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8.16979.1mRNA_L-elsbetiae_contig8.16979.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8 70729..70893 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8.16979.1 ID=prot_L-elsbetiae_contig8.16979.1|Name=mRNA_L-elsbetiae_contig8.16979.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=55bp
CTAGRARTAIVRGKATAAAPAGRPLRVCVVGSGPAGFYVTKYLLKASEWM
RRES*
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