prot_L-elsbetiae_contig778.16728.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig778.16728.1
Unique Nameprot_L-elsbetiae_contig778.16728.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1295
Homology
BLAST of mRNA_L-elsbetiae_contig778.16728.1 vs. uniprot
Match: A0A6H5KQ21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ21_9PHAE)

HSP 1 Score: 1077 bits (2786), Expect = 0.000e+0
Identity = 800/1292 (61.92%), Postives = 846/1292 (65.48%), Query Frame = 0
Query:   76 GTKRSKRCGICVGCRAKSCDQCKYCRDSKKNNGPNKLKQPCIKRRCRNLPGDAIDWTDALLPDRRDSGGGALAPPELECEYCFKRARELCSPMVVDLSPVEAEAFLKQQEAEHSVNGSGGGGSEGGHRKVRFPRFRRASRGEXXXXXXXXXXXEGSPRASVGPTVHEACAQSMFKARAERAQHKLRGLREQAVEEAIRLGGYQTLPLGRDRHGRFYYRFPRDSRRVFVSQPVREGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERPSSQGEGSLVRAFSPAAGRP-------------PLEEDLMVYENDGDVEALMAWLNESGQREGPLRAALLRAFPP---SPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGA-------------------------------------------RRGPRRGGXX--GDA-NDRGVLARPSRNQELPRMLAEGGVELRIAVNPPGANNNVLVPATEAVVEFDNDGEAAEDDPSN--GGAVTWSKKYHAVRLHDASSGEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTGTFRLVFHVVPAQFYAAPPPVQVGGEAAPVEKKKGFNIKPLEFHVQVSPRFTYTGAVAALHKLRAVQYLKHRHRQEPDAVAVDLDLSFDCDEVECLKMGIFTMLNALPKGAFKEGGGGGVGASATDTLGDDESCDGFEQQSAGLAAAASGWTPSLRECWVPHVASATKSQDLMEALLLLESCLDPKWLKQWYRPVQQKMQSTSHLLRLSTPAAVALRLFGLDRAILYDKVATRAQRGSRLRSGIQLRDRSGADSSRGXXXXXXXXXXXXXXGAAANGRRSRTSLQAAAEAAPSRPRGRQSRTSRAAEGREEGGGRGSRYPPRRGRAAKKVXXXXXXXXXXXXXDLSPGSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASASATSTWKCPICTVDNELASDKCVVCAHRRPATALPRGSRKRQRQERNEPLDDGNVGGGRSSDEQDASGXXXXXXXXXXXXXXXXTSTVGAGERRGGETTRQRRGVPRVNYAEDND--------DGGAAGMARGRGAKASAAKQGRRGGGAGKPAARGGGKSRNAPLSLSGELRLEVKGEEEALPGDVRAFRRLVRSVVKGLSREAFAVHFLDAVDLNSYPQYVEVVAEPMHLGKIMFKLRQGEYDSRE 1295
            G KRSKRCGICVGCRAK+CD+CKYC DSKKNNGPNKLKQPCIKRRCRNLPGDAIDW DALLPD R +GGG     ELECEYCFK  +ELCSPMVVDLSP EAE FLK QEAE + +GSGG      HRKVRFPRF RA  GE XXXXXX      SPRAS GP VHE CAQSMFKARAERAQHKLRGLREQAVEEAIRLGGYQTLPLGRDRHGRFYYRFP DSRRVFVSQPVREG GDG                                SE   + G G   +A   AA +P             P EED MVYENDGDV+AL+AWLNESGQREGPLRAALLRAFPP   SP XX                            XXXXXXXXXXXXXX GA                                           R G RR      GDA +DRGVLARPSRNQELPR+LAEGGVELR+AVNPPGA+NNV+VP TE VVEFDNDGEA EDD  N  GG+V+WSKKY+AVRLHDAS+GEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTG FRLVFHVVPAQFYAAP P   G E A   +KKGF IKPLEFHVQVSPRFTYTGAVAALHKLRAV YLK RHR+E +AV VDLDL FDCDE+ECLKMG+FT+LNALPKGAFKEGG        TD +          ++        SGWTPSLRECWV  VASAT+ QDLMEALLLLE CLD KWLK WYRP QQKMQS  HLLRLSTPAAVALRLF LDRAILYDKVATRAQRGSRLR+GIQLR RS A S  G         XXXXX                         G      R  +GR       +R PPRRGR AKK              DLSPGSW  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              D  A A +TW CP CTVDNELA DKCVVC+ RRPA ALPRG                               XXXXXXXXXXXXXXXX      G        RQRRGV RVNYAEDND                   GAK S   +                  RNAPL L  ELR  V  EE  L  DVR FRR+VRS VK  S+EA+ +HF DAVDL +YPQY ++V EPM L +I+FKLRQGEYDS+E
Sbjct: 2036 GAKRSKRCGICVGCRAKACDRCKYCLDSKKNNGPNKLKQPCIKRRCRNLPGDAIDWADALLPDPRANGGGGGG--ELECEYCFKMEKELCSPMVVDLSPEEAETFLKHQEAEQNGDGSGGAECSNPHRKVRFPRFSRARPGEGXXXXXXVGK---SPRAS-GPVVHEVCAQSMFKARAERAQHKLRGLREQAVEEAIRLGGYQTLPLGRDRHGRFYYRFPGDSRRVFVSQPVREGKGDGLDSVV---------------------------SEATGADGGGGDAKAAGVAAAQPSWRKLVPSPGGPAPAEEDFMVYENDGDVDALVAWLNESGQREGPLRAALLRAFPPASPSPPXXEAALALEKADHGDGLKPSAAAMVADGEGXXXXXXXXXXXXXXXGADNVAAATAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRGGARRSSSRRAGDAASDRGVLARPSRNQELPRLLAEGGVELRVAVNPPGASNNVVVPETEVVVEFDNDGEAVEDDARNEGGGSVSWSKKYYAVRLHDASTGEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTGRFRLVFHVVPAQFYAAPQP---GDEGAATAEKKGFKIKPLEFHVQVSPRFTYTGAVAALHKLRAVPYLKQRHREESEAVEVDLDLRFDCDELECLKMGLFTLLNALPKGAFKEGG------LTTDEVEGLSEQQXXXRERLPATTTTSGWTPSLRECWVSQVASATRGQDLMEALLLLELCLDQKWLKPWYRPAQQKMQSAWHLLRLSTPAAVALRLFALDRAILYDKVATRAQRGSRLRNGIQLRGRSSASSRGGGDTKAARALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEG------RGDDGR-------NRKPPRRGRPAKKTSGGGSR-------DLSPGSWEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAESGDGV-------DDDALAPTTWSCPTCTVDNELADDKCVVCSKRRPAAALPRGX-------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXGR------DRQRRGVARVNYAEDNDVDSDEXXXXXXXXXXXXXXGAKKSKVVR----------------MGRNAPLPLKDELRRGV-AEEVVLLCDVREFRRVVRSAVKRSSKEAYTLHFRDAVDLVAYPQYTDIVKEPMDLARILFKLRQGEYDSQE 3210          
BLAST of mRNA_L-elsbetiae_contig778.16728.1 vs. uniprot
Match: D8LI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI13_ECTSI)

HSP 1 Score: 1025 bits (2651), Expect = 0.000e+0
Identity = 786/1228 (64.01%), Postives = 824/1228 (67.10%), Query Frame = 0
Query:   78 KRSKRCGICVGCRAKSCDQCKYCRDSKKNNGPNKLKQPCIKRRCRNLPGDAIDWTDALLPDRRDSGGGALAPPELECEYCFKRARELCSPMVVDLSPVEAEAFLKQQEAEHSVNGSGGGGSEGGHRKVRFPRFRRASRGEXXXXXXXXXXXEGSPRASVGPTVHEACAQSMFKARAERAQHKLRGLREQAVEEAIRLGGYQTLPLGRDRHGRFYYRFPRDSRRVFVSQPVREGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERPSSQGEGSLVRAFSPAAGRP-PLEEDLMVYENDGDVEALMAWLNESGQREGPLRAALLRAFPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGARRGPRRGGXX---GDA-NDRGVLARPSRNQELPRMLAEGGVELRIAVNPPGANNNVLVPATEAVVEFDNDGEAAEDDPSNGG--AVTWSKKYHAVRLHDASSGEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTGTFRLVFHVVPAQFYAAPPPVQVGGEAAPVEKKKGFNIKPLEFHVQVSPRFTYTGAVAALHKLRAVQYLKHRHRQEPDAVAVDLDLSFDCDEVECLKMGIFTMLNALPKGAFKEGGGGGVGASATDTLGDDESCDGFEQQSAGLAAAASGWTPSLRECWVPHVASATKSQDLMEALLLLESCLDPKWLKQWYRPVQQKMQSTSHLLRLSTPAAVALRLFGLDRAILYDKVATRAQRGSRLRSGIQLRDRSGADSSRGXXXXXXXXXXXXXXGAAANGRRSRTSLQAAAEAAPSRPRGRQSRTSRAAEGREEGGGRGSRYPPRRGRAAKKVXXXXXXXXXXXXXDLSPGSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASASATSTWKCPICTVDNELASDKCVVCAHRRPATALPRGSRKRQRQERNEPLDDGNVGGGRSSDEQDASGXXXXXXXXXXXXXXXXTSTVGAGERRGGETTRQRRGVPRVNYAEDND---DGGAAGMARGRGAKASAAKQGRRGGGAGKPAARGGGKSRNAPLSLSGELRLEVKGEEEALPGDVRAFRRLVRSVVKGLSREAFAVHFLDAVDLNSYPQYVEVVAEPMHLGKIMFKLRQGEYDSRE 1295
            KRSKRCGICV          KYC DSKKNNGPNKLKQPCIKRRCRNLPGDAIDW DALLPD R +GGG     ELECEYCFK  +ELCSPMVVDLSP EAE FLKQQEAE + +GSG  G+   HRKVRFPRF RA  GE             SPRAS GP VHE CAQSMFKARAERAQHKLRGLREQAVEEAIRLGGYQTLPLGRDRHGRFYYRFP DSRRVFVS PVREG GDG                     XXXXXXXXXXX             R   P+ G P P EEDLMVYENDGDV+AL+AWLNESGQREGPLRAALLRAFPP+ XXXXXXX                              XXXXXXXX           XX   GDA +DRGVLARPSRNQELPR+LAEGGVELR+AVNPPGA+NNVLVP TE VVEFDNDGEA E+D  NGG  +V+WSKKYHAVRLHDAS+GEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTG FRLVFHVVPAQFYAAP P   G  AA  EKKKGFNIKPLEFHVQVSPRFTYTGAVAALHKLRAV YLK RHR+E +AV VDLDL FDCDE              LP              +AT T                     SGWTPSLRECWV HVASAT+SQDLMEALLLLE CLD KWLK WYRP QQKMQS  HLLRLSTPAAVALRLF LDRAILYDKVATRAQRGSRLR+GIQLR RS A S  G         XXXXX                         G      R  +GR       SR PPRRGR AKK              DLSPGSW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           D  A A +TW CPICTVDN+LA DKCVVC+ RRPA ALPRGSR                             XXXXXXXXXXXXXXXX           G   RQRRGV RVNYAEDND   D                AK+ +          R G   RNAP+ L  ELR  V  EEE LPGDVR FRR+VRS VKG S+EAF +HF DAVDL +YPQY ++V EPM L +I+FKLRQGEYDS+E
Sbjct: 1672 KRSKRCGICVXXXXXXXXXXKYCLDSKKNNGPNKLKQPCIKRRCRNLPGDAIDWADALLPDPRANGGGGGG--ELECEYCFKMEKELCSPMVVDLSPEEAETFLKQQEAEQNGDGSGAEGANP-HRKVRFPRFSRARPGEGGGGGVGR-----SPRAS-GPVVHEVCAQSMFKARAERAQHKLRGLREQAVEEAIRLGGYQTLPLGRDRHGRFYYRFPGDSRRVFVSHPVREGKGDGLDIVVSEATGADGAGGDAKAAXXXXXXXXXXXXXX--------XXRKLVPSPGGPAPAEEDLMVYENDGDVDALVAWLNESGQREGPLRAALLRAFPPAXXXXXXXXAAAALEKTDDGDGLKPLASAAMVADGEGDGXXXXXXXXXXXXXXXXXXXXXXRAGDAASDRGVLARPSRNQELPRLLAEGGVELRVAVNPPGASNNVLVPETEVVVEFDNDGEAVEEDARNGGGGSVSWSKKYHAVRLHDASTGEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTGRFRLVFHVVPAQFYAAPQPGDEG--AATAEKKKGFNIKPLEFHVQVSPRFTYTGAVAALHKLRAVPYLKQRHREESEAVEVDLDLRFDCDE-------------GLP--------------AATTT---------------------SGWTPSLRECWVSHVASATRSQDLMEALLLLELCLDQKWLKPWYRPAQQKMQSAWHLLRLSTPAAVALRLFALDRAILYDKVATRAQRGSRLRNGIQLRGRSSASSRGGGDTKAARAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEG------RGDDGR-------SRKPPRRGRPAKKTSGGGSR-------DLSPGSWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAESVDGV---DDDALAPTTWSCPICTVDNDLADDKCVVCSQRRPAAALPRGSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSS---GGRDRQRRGVARVNYAEDNDVDSDEXXXXXXXXXXXXXXXAKKSK--------VVRSG---RNAPVPLKDELRRGV-AEEEVLPGDVREFRRVVRSAVKGFSKEAFTLHFRDAVDLVAYPQYTDIVKEPMDLARILFKLRQGEYDSQE 2794          
BLAST of mRNA_L-elsbetiae_contig778.16728.1 vs. uniprot
Match: A0A4D9D954_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D954_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.230e-20
Identity = 103/350 (29.43%), Postives = 153/350 (43.71%), Query Frame = 0
Query:  516 PATEAVVEFDNDGEAAEDDPSNGGAVTWSKKYHAVRLHDASSGEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTGTFRLVFHVVPAQFYAAPPPVQVGGEAAPVEKKKGFNIKPLEFHVQVSPRFTYTGAVAALHKLRAVQYLKHRHRQEPDAVAVDLDLSFDCDEVECLKMGIFTMLNALPKGAFKE------------GGGGGVGASATDTLGDDESCDGFEQQSAGLAAAASGWTPSLRECWVPHVASATKSQDLMEALLLLESCLDPKWLKQWYRPVQQKMQSTS-HLLRL-STPAAVALRLFGLDRAILYDKV--ATRAQRGSRLRS 849
            P    V++ + D +   D      AV  ++KYHAV L DA         + + + V ++I++G + VE +       K+ +++F   +F   G + L + V                            IKPL   V+V  R   T   + L+   +   +    R      +V+LD+  D DEV  L++ +  +   LP GA  E            GGGG     A D             +   + A    WT +L+  W+ H+  A    ++ME LLLLESCL P+WLK W+ P+++   +TS HLLRL +T AA A  LF LD+AILYDK     R  RG   RS
Sbjct: 1660 PVPSEVLDIEVDPDIWGDSLERKAAVRKTRKYHAVVLVDAEDKVW----EGRNLGVRFQIFKGGEEVEESSTPRAH-KDHIFWFNVYEFLLPGLYTLRYTV----------------------DTLSREIKPLCLRVEVRARRAATSVRSVLNSHLSFLNISRGGRYSLRQ-SVELDIPEDADEVVGLRIALLQLKETLPNGALLESPEDLGGSIAHLGGGGSTNIHAGDG------------EVGPVRAPVCYWTEALQAQWINHLMEAETPHEVMEGLLLLESCLHPEWLKPWFHPLRRSYAATSSHLLRLGTTAAAAAFHLFILDKAILYDKERKVPRKTRGQSARS 1969          
BLAST of mRNA_L-elsbetiae_contig778.16728.1 vs. uniprot
Match: A0A7S0SWC1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWC1_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.460e-19
Identity = 97/354 (27.40%), Postives = 169/354 (47.74%), Query Frame = 0
Query:  491 RMLAEGGVELRIAVNPPGANNNVLVPATEAVVEFDNDGE--AAEDDPSNGGAVTWSKKYHAVRLHDASSGEVLVPSQRQGISVVYEIWRG--QQLVEFTPCDVPFDKNGVYFFTAPKFHRTGTFRLVFHVVPAQFYAAPPPVQVGGEAAPVEKKKGFNIKPLEFHVQVSPRFTYTGAVAALHKLRAVQYLKHRHRQ---EPDAVAVDLDLSFDCDEVECLKMGIFTMLNALPKGAFKEGGGGGVGASATDTLGDDESCDGFEQQSAGLAAAASGWTPSLRECWVPHVASATKSQDLMEALLLLESCLDPKWLKQWYRPVQQKMQSTSHLLRLSTPAAVALRLFGLDRAILYDKV 837
            ++L + GV++         NN V+    E V +  ND E    +DD S+    ++SKKY A+ L + S   V +P  +  I+V Y+I R      + ++P   P+  N +Y+F++  F ++G + + F +            +   +          NIKPL F+VQV  +    G++ A+++L A++Y  + +RQ     + +   LD   +  E + L++ I T+  ALP G+           +  D    + S D  E   A L A ++ W+  L + W   + S T    LME LLLLES +  +WL      +   +    + ++  + +++ALRLF LD+AILY+K+
Sbjct:   80 KLLKDKGVDV--------LNNYVI--EEEDVFDDTNDNENVTEDDDISHVEYFSYSKKYFAIALVNKSEKRVKLP--KGTITVTYQIHRQGIASPLAYSPLSEPWSDN-IYYFSSINFKKSGKYTISFLI------------EFKNQNNQTSSVNVANIKPLVFNVQVEAKNVLCGSIHAIYQLNALKYYNYANRQINMNRNDLKTLLDDITNESEFKALQISILTLYAALPLGSLP---------TVDDENSKNSSLD--EVNIANLIAESNNWSDILDQTWRGLIHSTTSLTILMECLLLLESFISKQWLHASNVKLLNALPLPHYAMKSISLSSIALRLFCLDKAILYEKL 397          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig778.16728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KQ21_9PHAE0.000e+061.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI13_ECTSI0.000e+064.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9D954_9STRA2.230e-2029.43Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S0SWC1_9STRA1.460e-1927.40Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..45
NoneNo IPR availableGENE3D4.10.1060.10coord: 1051..1091
e-value: 7.7E-7
score: 30.0
NoneNo IPR availablePANTHERPTHR34377:SF3TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEINcoord: 421..911
NoneNo IPR availablePANTHERPTHR34377FAMILY NOT NAMEDcoord: 421..911
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 1059..1083
e-value: 0.0012
score: 28.2
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 1061..1080
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 1057..1086
score: 9.055
IPR028941WHIM2 domainPFAMPF15613WSDcoord: 278..407
e-value: 1.0E-7
score: 32.3
IPR002857Zinc finger, CXXC-typePFAMPF02008zf-CXXCcoord: 77..121
e-value: 9.2E-10
score: 38.4
IPR002857Zinc finger, CXXC-typePROSITEPS51058ZF_CXXCcoord: 75..122
score: 12.175
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1227..1295
e-value: 3.7E-10
score: 41.5
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 1222..1294
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1243..1293
e-value: 1.9E-5
score: 24.6
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1249..1295
score: 10.318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig778contigL-elsbetiae_contig778:23656..32652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig778.16728.1mRNA_L-elsbetiae_contig778.16728.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig778 23656..32652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig778.16728.1 ID=prot_L-elsbetiae_contig778.16728.1|Name=mRNA_L-elsbetiae_contig778.16728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1295bp
MEFCEDAEDEQRRKKNESALKNMVVERIVDAKIRVEKERRQAKDEAAAVG
VDSSGAVASSSEAAAAATGAGGGASGTKRSKRCGICVGCRAKSCDQCKYC
RDSKKNNGPNKLKQPCIKRRCRNLPGDAIDWTDALLPDRRDSGGGALAPP
ELECEYCFKRARELCSPMVVDLSPVEAEAFLKQQEAEHSVNGSGGGGSEG
GHRKVRFPRFRRASRGEGEGGRDRDRDREGSPRASVGPTVHEACAQSMFK
ARAERAQHKLRGLREQAVEEAIRLGGYQTLPLGRDRHGRFYYRFPRDSRR
VFVSQPVREGDGDGGDGGDTGAAAAAVSALGVTGGAATGAEGGSAGSERP
SSQGEGSLVRAFSPAAGRPPLEEDLMVYENDGDVEALMAWLNESGQREGP
LRAALLRAFPPSPPPPLPEQVKEADGDGKKPDAGGAGAGAGAGEDDEDNA
RGGGGGGGRGARRGPRRGGGGGDANDRGVLARPSRNQELPRMLAEGGVEL
RIAVNPPGANNNVLVPATEAVVEFDNDGEAAEDDPSNGGAVTWSKKYHAV
RLHDASSGEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFT
APKFHRTGTFRLVFHVVPAQFYAAPPPVQVGGEAAPVEKKKGFNIKPLEF
HVQVSPRFTYTGAVAALHKLRAVQYLKHRHRQEPDAVAVDLDLSFDCDEV
ECLKMGIFTMLNALPKGAFKEGGGGGVGASATDTLGDDESCDGFEQQSAG
LAAAASGWTPSLRECWVPHVASATKSQDLMEALLLLESCLDPKWLKQWYR
PVQQKMQSTSHLLRLSTPAAVALRLFGLDRAILYDKVATRAQRGSRLRSG
IQLRDRSGADSSRGGGGGGSSSSSNRNPGAAANGRRSRTSLQAAAEAAPS
RPRGRQSRTSRAAEGREEGGGRGSRYPPRRGRAAKKVTKGRGGGRGGGGR
DLSPGSWEEDDDEDDEDDGDDDDDAEEEEEEEEEDPEEERRRRRAAGRNR
RHEKRRSRVVEDDEEDEEEEEEEERIHSSRRTKQSGDGKQRKRSAAGGGG
GDASASATSTWKCPICTVDNELASDKCVVCAHRRPATALPRGSRKRQRQE
RNEPLDDGNVGGGRSSDEQDASGSDQGTGGGGGGGMGDSTSTVGAGERRG
GETTRQRRGVPRVNYAEDNDDGGAAGMARGRGAKASAAKQGRRGGGAGKP
AARGGGKSRNAPLSLSGELRLEVKGEEEALPGDVRAFRRLVRSVVKGLSR
EAFAVHFLDAVDLNSYPQYVEVVAEPMHLGKIMFKLRQGEYDSRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR028941WHIM2_dom
IPR002857Znf_CXXC
IPR036427Bromodomain-like_sf
IPR001487Bromodomain